RNA–Protein interactions for RNA: ENST00000472710.2

LRRC41-203, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 4,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-203ENST00000472710 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
LRRC41-203ENST00000472710 EIF3AQ14152 1382 aaKnown RBP13.25□□□□□ -0.29
LRRC41-203ENST00000472710 E9PSI1 815 aa13.25□□□□□ -0.29
LRRC41-203ENST00000472710 NCOA1Q15788 1441 aa13.25□□□□□ -0.29
LRRC41-203ENST00000472710 CASC1Q6TDU7 716 aa13.24□□□□□ -0.29
LRRC41-203ENST00000472710 IL27Q8NEV9 243 aa13.24□□□□□ -0.29
LRRC41-203ENST00000472710 CLUAP1Q96AJ1 413 aa13.24□□□□□ -0.29
LRRC41-203ENST00000472710 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
LRRC41-203ENST00000472710 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
LRRC41-203ENST00000472710 APAF1O14727 1248 aa13.23□□□□□ -0.29
LRRC41-203ENST00000472710 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
LRRC41-203ENST00000472710 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
LRRC41-203ENST00000472710 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
LRRC41-203ENST00000472710 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
LRRC41-203ENST00000472710 KIAA1107Q9UPP5 1409 aa13.23□□□□□ -0.29
LRRC41-203ENST00000472710 GBP4Q96PP9 640 aa13.23□□□□□ -0.29
LRRC41-203ENST00000472710 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
LRRC41-203ENST00000472710 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
LRRC41-203ENST00000472710 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
LRRC41-203ENST00000472710 PTMAP06454 111 aaKnown RBP13.22□□□□□ -0.29
LRRC41-203ENST00000472710 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
LRRC41-203ENST00000472710 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
LRRC41-203ENST00000472710 ITPRIPQ8IWB1 547 aa13.21□□□□□ -0.29
LRRC41-203ENST00000472710 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
LRRC41-203ENST00000472710 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.3
LRRC41-203ENST00000472710 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.3
LRRC41-203ENST00000472710 WASHC2CQ9Y4E1 1318 aa13.2□□□□□ -0.3
LRRC41-203ENST00000472710 TOPBP1Q92547 1522 aa13.2□□□□□ -0.3
LRRC41-203ENST00000472710 DAPK1P53355 1430 aa13.19□□□□□ -0.3
LRRC41-203ENST00000472710 NGEFQ8N5V2 710 aa13.19□□□□□ -0.3
LRRC41-203ENST00000472710 SMC4Q9NTJ3 1288 aa13.19□□□□□ -0.3
LRRC41-203ENST00000472710 ROCK1Q13464 1354 aa13.19□□□□□ -0.3
LRRC41-203ENST00000472710 PTMSP20962 102 aa13.19□□□□□ -0.3
LRRC41-203ENST00000472710 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
LRRC41-203ENST00000472710 MSNP26038 577 aaKnown RBP13.18□□□□□ -0.3
LRRC41-203ENST00000472710 ANO8Q9HCE9 1232 aaPredicted RBP13.18□□□□□ -0.3
LRRC41-203ENST00000472710 POGKQ9P215 609 aa13.18□□□□□ -0.3
LRRC41-203ENST00000472710 RRP7AQ9Y3A4 280 aaKnown RBP13.17□□□□□ -0.3
LRRC41-203ENST00000472710 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
LRRC41-203ENST00000472710 ABCA10Q8WWZ4 1543 aa13.17□□□□□ -0.3
LRRC41-203ENST00000472710 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
LRRC41-203ENST00000472710 ESF1Q9H501 851 aaKnown RBP13.16□□□□□ -0.3
LRRC41-203ENST00000472710 DNTTIP2Q5QJE6 756 aaKnown RBP13.16□□□□□ -0.3
LRRC41-203ENST00000472710 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
LRRC41-203ENST00000472710 HECW1Q76N89 1606 aa13.15□□□□□ -0.3
LRRC41-203ENST00000472710 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
LRRC41-203ENST00000472710 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
LRRC41-203ENST00000472710 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
LRRC41-203ENST00000472710 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
LRRC41-203ENST00000472710 DDX11L8A8MPP1 907 aa13.14□□□□□ -0.31
LRRC41-203ENST00000472710 SAFB2Q14151 953 aaKnown RBP eCLIP13.14□□□□□ -0.31
LRRC41-203ENST00000472710 EPRSP07814 1512 aaKnown RBP13.14□□□□□ -0.31
LRRC41-203ENST00000472710 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
LRRC41-203ENST00000472710 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
LRRC41-203ENST00000472710 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
LRRC41-203ENST00000472710 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
LRRC41-203ENST00000472710 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
LRRC41-203ENST00000472710 KIF3BO15066 747 aa13.12□□□□□ -0.31
LRRC41-203ENST00000472710 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
LRRC41-203ENST00000472710 CDK13Q14004 1512 aaKnown RBP13.11□□□□□ -0.31
LRRC41-203ENST00000472710 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
LRRC41-203ENST00000472710 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
LRRC41-203ENST00000472710 NESP48681 1621 aa13.1□□□□□ -0.31
LRRC41-203ENST00000472710 ABCC5O15440 1437 aa13.09□□□□□ -0.31
LRRC41-203ENST00000472710 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
LRRC41-203ENST00000472710 AAMPQ13685 434 aa13.09□□□□□ -0.31
LRRC41-203ENST00000472710 PRG4Q92954 1404 aaPredicted RBP13.09□□□□□ -0.31
LRRC41-203ENST00000472710 CUL7Q14999 1698 aa13.09□□□□□ -0.31
LRRC41-203ENST00000472710 TPRNQ4KMQ1 711 aa13.08□□□□□ -0.32
LRRC41-203ENST00000472710 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
LRRC41-203ENST00000472710 CALD1Q05682 793 aaKnown RBP13.08□□□□□ -0.32
LRRC41-203ENST00000472710 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
LRRC41-203ENST00000472710 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
LRRC41-203ENST00000472710 GRIN2BQ13224 1484 aa13.08□□□□□ -0.32
LRRC41-203ENST00000472710 PTPRGP23470 1445 aa13.08□□□□□ -0.32
LRRC41-203ENST00000472710 HSP90AA2PQ14568 343 aaPredicted RBP13.07□□□□□ -0.32
LRRC41-203ENST00000472710 GGT6Q6P531 493 aa13.07□□□□□ -0.32
LRRC41-203ENST00000472710 STAC3Q96MF2 364 aa13.07□□□□□ -0.32
LRRC41-203ENST00000472710 STK26Q9P289 416 aa13.07□□□□□ -0.32
LRRC41-203ENST00000472710 PDE3AQ14432 1141 aa13.07□□□□□ -0.32
LRRC41-203ENST00000472710 HAP1P54257 671 aaPredicted RBP13.06□□□□□ -0.32
LRRC41-203ENST00000472710 HDGFL2Q7Z4V5 671 aaPredicted RBP13.06□□□□□ -0.32
LRRC41-203ENST00000472710 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
LRRC41-203ENST00000472710 RUNDC1Q96C34 613 aa13.06□□□□□ -0.32
LRRC41-203ENST00000472710 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
LRRC41-203ENST00000472710 BCAR3O75815 825 aa13.05□□□□□ -0.32
LRRC41-203ENST00000472710 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
LRRC41-203ENST00000472710 SKOR2Q2VWA4 1001 aaPredicted RBP13.05□□□□□ -0.32
LRRC41-203ENST00000472710 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
LRRC41-203ENST00000472710 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
LRRC41-203ENST00000472710 DDX19BQ9UMR2 479 aa13.05□□□□□ -0.32
LRRC41-203ENST00000472710 APBB1O00213 710 aa13.04□□□□□ -0.32
LRRC41-203ENST00000472710 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
LRRC41-203ENST00000472710 MCCP23508 829 aa13.04□□□□□ -0.32
LRRC41-203ENST00000472710 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
LRRC41-203ENST00000472710 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
LRRC41-203ENST00000472710 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
LRRC41-203ENST00000472710 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
LRRC41-203ENST00000472710 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
LRRC41-203ENST00000472710 ANKRD45Q5TZF3 282 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms