RNA–Protein interactions for RNA: ENST00000472649.2

LINC02339-201, Transcript of long intergenic non-protein coding RNA 2339, humanhuman

TSL 1 (best) BASIC

Gene LINC02339, Length 752 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02339-201ENST00000472649 EPAS1Q99814 870 aa11.61□□□□□ -0.55
LINC02339-201ENST00000472649 IRX2Q9BZI1 471 aaPredicted RBP11.61□□□□□ -0.55
LINC02339-201ENST00000472649 DPYSL4O14531 572 aa11.6□□□□□ -0.55
LINC02339-201ENST00000472649 WNT2BQ93097 391 aa11.6□□□□□ -0.55
LINC02339-201ENST00000472649 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
LINC02339-201ENST00000472649 IFFO2Q5TF58 517 aa11.58□□□□□ -0.56
LINC02339-201ENST00000472649 THSD4Q6ZMP0 1018 aa11.56□□□□□ -0.56
LINC02339-201ENST00000472649 RABGEF1Q9UJ41 708 aa11.56□□□□□ -0.56
LINC02339-201ENST00000472649 ANKK1Q8NFD2 765 aa11.54□□□□□ -0.56
LINC02339-201ENST00000472649 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
LINC02339-201ENST00000472649 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
LINC02339-201ENST00000472649 PROX2Q3B8N5 592 aa11.51□□□□□ -0.57
LINC02339-201ENST00000472649 C6orf132Q5T0Z8 1188 aa11.51□□□□□ -0.57
LINC02339-201ENST00000472649 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
LINC02339-201ENST00000472649 SPDYE16A6NNV3 312 aaPredicted RBP11.5□□□□□ -0.57
LINC02339-201ENST00000472649 COL9A1P20849 921 aa11.5□□□□□ -0.57
LINC02339-201ENST00000472649 LAPTM4BQ86VI4 370 aa11.5□□□□□ -0.57
LINC02339-201ENST00000472649 DDX12PQ92771 950 aa11.5□□□□□ -0.57
LINC02339-201ENST00000472649 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
LINC02339-201ENST00000472649 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
LINC02339-201ENST00000472649 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
LINC02339-201ENST00000472649 E2F4Q16254 413 aa11.48□□□□□ -0.57
LINC02339-201ENST00000472649 NBR1Q14596 966 aa11.47□□□□□ -0.57
LINC02339-201ENST00000472649 PDIA6Q15084 440 aa11.47□□□□□ -0.57
LINC02339-201ENST00000472649 MAP3K7O43318 606 aa11.46□□□□□ -0.57
LINC02339-201ENST00000472649 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.57
LINC02339-201ENST00000472649 A0A0G2JS52 829 aa11.44□□□□□ -0.58
LINC02339-201ENST00000472649 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
LINC02339-201ENST00000472649 EN1Q05925 392 aaPredicted RBP11.43□□□□□ -0.58
LINC02339-201ENST00000472649 NYAP1Q6ZVC0 841 aa11.42□□□□□ -0.58
LINC02339-201ENST00000472649 PACS2Q86VP3 889 aa11.41□□□□□ -0.58
LINC02339-201ENST00000472649 ZFRQ96KR1 1074 aaKnown RBP11.41□□□□□ -0.58
LINC02339-201ENST00000472649 SOWAHBA6NEL2 793 aa11.4□□□□□ -0.58
LINC02339-201ENST00000472649 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.58
LINC02339-201ENST00000472649 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
LINC02339-201ENST00000472649 BCAMP50895 628 aa11.38□□□□□ -0.59
LINC02339-201ENST00000472649 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
LINC02339-201ENST00000472649 ARIH1Q9Y4X5 557 aaPredicted RBP11.38□□□□□ -0.59
LINC02339-201ENST00000472649 LRCH3Q96II8 777 aa11.37□□□□□ -0.59
LINC02339-201ENST00000472649 GRXCR2A6NFK2 248 aa11.36□□□□□ -0.59
LINC02339-201ENST00000472649 TSR1Q2NL82 804 aaKnown RBP11.35□□□□□ -0.59
LINC02339-201ENST00000472649 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.35□□□□□ -0.59
LINC02339-201ENST00000472649 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
LINC02339-201ENST00000472649 CDCA7LQ96GN5 454 aa11.31□□□□□ -0.6
LINC02339-201ENST00000472649 NBPF26B4DH59 902 aa11.3□□□□□ -0.6
LINC02339-201ENST00000472649 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
LINC02339-201ENST00000472649 PRSS12P56730 875 aa11.3□□□□□ -0.6
LINC02339-201ENST00000472649 Q6ZNB5 142 aa11.3□□□□□ -0.6
LINC02339-201ENST00000472649 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
LINC02339-201ENST00000472649 HPS5Q9UPZ3 1129 aa11.3□□□□□ -0.6
LINC02339-201ENST00000472649 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
LINC02339-201ENST00000472649 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.61
LINC02339-201ENST00000472649 KCNC4Q03721 635 aa11.27□□□□□ -0.61
LINC02339-201ENST00000472649 PPP4CP60510 307 aa11.26□□□□□ -0.61
LINC02339-201ENST00000472649 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
LINC02339-201ENST00000472649 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
LINC02339-201ENST00000472649 OSBPP22059 807 aa11.22□□□□□ -0.61
LINC02339-201ENST00000472649 TATDN2Q93075 761 aa11.22□□□□□ -0.61
LINC02339-201ENST00000472649 SMAPO00193 183 aa11.21□□□□□ -0.61
LINC02339-201ENST00000472649 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
LINC02339-201ENST00000472649 NECTIN2Q92692 538 aa11.21□□□□□ -0.61
LINC02339-201ENST00000472649 SAMD7Q7Z3H4 446 aa11.2□□□□□ -0.62
LINC02339-201ENST00000472649 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
LINC02339-201ENST00000472649 RNF40O75150 1001 aa11.18□□□□□ -0.62
LINC02339-201ENST00000472649 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
LINC02339-201ENST00000472649 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
LINC02339-201ENST00000472649 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
LINC02339-201ENST00000472649 LAPTM4AQ15012 233 aa11.16□□□□□ -0.62
LINC02339-201ENST00000472649 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
LINC02339-201ENST00000472649 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
LINC02339-201ENST00000472649 P3H3Q8IVL6 736 aa11.14□□□□□ -0.63
LINC02339-201ENST00000472649 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
LINC02339-201ENST00000472649 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
LINC02339-201ENST00000472649 TRAF7Q6Q0C0 670 aa11.11□□□□□ -0.63
LINC02339-201ENST00000472649 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
LINC02339-201ENST00000472649 IL21Q9HBE4 155 aa11.1□□□□□ -0.63
LINC02339-201ENST00000472649 TTC13Q8NBP0 860 aa11.08□□□□□ -0.64
LINC02339-201ENST00000472649 LCE2BO14633 110 aa11.07□□□□□ -0.64
LINC02339-201ENST00000472649 MTRQ99707 1265 aa11.07□□□□□ -0.64
LINC02339-201ENST00000472649 PRR14Q9BWN1 585 aa11.07□□□□□ -0.64
LINC02339-201ENST00000472649 NPDC1Q9NQX5 325 aaPredicted RBP11.07□□□□□ -0.64
LINC02339-201ENST00000472649 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
LINC02339-201ENST00000472649 TJAP1Q5JTD0 557 aa11.06□□□□□ -0.64
LINC02339-201ENST00000472649 SWT1Q5T5J6 900 aaKnown RBP11.06□□□□□ -0.64
LINC02339-201ENST00000472649 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
LINC02339-201ENST00000472649 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
LINC02339-201ENST00000472649 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
LINC02339-201ENST00000472649 GGCXP38435 758 aa11.02□□□□□ -0.65
LINC02339-201ENST00000472649 GFRA3O60609 400 aa11.01□□□□□ -0.65
LINC02339-201ENST00000472649 APLP1P51693 650 aa11.01□□□□□ -0.65
LINC02339-201ENST00000472649 PTGDRQ13258 359 aa11.01□□□□□ -0.65
LINC02339-201ENST00000472649 DNAJB2P25686 324 aa11□□□□□ -0.65
LINC02339-201ENST00000472649 EYA1Q99502 592 aa11□□□□□ -0.65
LINC02339-201ENST00000472649 FCHSD2O94868 740 aa10.98□□□□□ -0.65
LINC02339-201ENST00000472649 COPS2P61201 443 aa10.96□□□□□ -0.65
LINC02339-201ENST00000472649 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
LINC02339-201ENST00000472649 PPP1R18Q6NYC8 613 aa10.96□□□□□ -0.65
LINC02339-201ENST00000472649 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.96□□□□□ -0.65
LINC02339-201ENST00000472649 PRKD2Q9BZL6 878 aa10.95□□□□□ -0.66
LINC02339-201ENST00000472649 PCDHB3Q9Y5E6 796 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms