RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
LAMP1-203ENST00000472564 E9PSI1 815 aa21.55■■□□□ 1.04
LAMP1-203ENST00000472564 KIF21BO75037 1637 aa21.55■■□□□ 1.04
LAMP1-203ENST00000472564 NUTM2DQ5VT03 806 aaPredicted RBP21.54■■□□□ 1.04
LAMP1-203ENST00000472564 DRC7Q8IY82 874 aa21.54■■□□□ 1.04
LAMP1-203ENST00000472564 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
LAMP1-203ENST00000472564 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
LAMP1-203ENST00000472564 FGD6Q6ZV73 1430 aa21.54■■□□□ 1.04
LAMP1-203ENST00000472564 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.53■■□□□ 1.04
LAMP1-203ENST00000472564 KIF7Q2M1P5 1343 aa21.53■■□□□ 1.04
LAMP1-203ENST00000472564 HMMRO75330 724 aa21.52■■□□□ 1.04
LAMP1-203ENST00000472564 APAF1O14727 1248 aa21.52■■□□□ 1.04
LAMP1-203ENST00000472564 UACAQ9BZF9 1416 aa21.52■■□□□ 1.04
LAMP1-203ENST00000472564 CGNL1Q0VF96 1302 aa21.52■■□□□ 1.03
LAMP1-203ENST00000472564 WASHC2CQ9Y4E1 1318 aa21.51■■□□□ 1.03
LAMP1-203ENST00000472564 COG6Q9Y2V7 657 aa21.51■■□□□ 1.03
LAMP1-203ENST00000472564 FOXD4L1Q9NU39 408 aa21.51■■□□□ 1.03
LAMP1-203ENST00000472564 KIAA2012Q0VF49 1180 aa21.5■■□□□ 1.03
LAMP1-203ENST00000472564 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
LAMP1-203ENST00000472564 SYAP1Q96A49 352 aaPredicted RBP21.49■■□□□ 1.03
LAMP1-203ENST00000472564 GSE1Q14687 1217 aa21.48■■□□□ 1.03
LAMP1-203ENST00000472564 LMOD3Q0VAK6 560 aa21.48■■□□□ 1.03
LAMP1-203ENST00000472564 SLC4A10Q6U841 1118 aa21.48■■□□□ 1.03
LAMP1-203ENST00000472564 TRIM6-TRIM34B2RNG4 842 aa21.47■■□□□ 1.03
LAMP1-203ENST00000472564 PAK3O75914 559 aaPredicted RBP21.47■■□□□ 1.03
LAMP1-203ENST00000472564 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
LAMP1-203ENST00000472564 ZKSCAN2Q63HK3 967 aa21.46■■□□□ 1.03
LAMP1-203ENST00000472564 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
LAMP1-203ENST00000472564 LRRC9Q6ZRR7 1453 aa21.45■■□□□ 1.02
LAMP1-203ENST00000472564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.45■■□□□ 1.02
LAMP1-203ENST00000472564 CHMP4AQ9BY43 222 aa21.45■■□□□ 1.02
LAMP1-203ENST00000472564 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
LAMP1-203ENST00000472564 CNTLNQ9NXG0 1405 aa21.44■■□□□ 1.02
LAMP1-203ENST00000472564 ELL2O00472 640 aaPredicted RBP21.43■■□□□ 1.02
LAMP1-203ENST00000472564 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
LAMP1-203ENST00000472564 ST18O60284 1047 aa21.41■■□□□ 1.02
LAMP1-203ENST00000472564 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
LAMP1-203ENST00000472564 NGEFQ8N5V2 710 aa21.41■■□□□ 1.02
LAMP1-203ENST00000472564 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
LAMP1-203ENST00000472564 NOL8Q76FK4 1167 aaKnown RBP21.4■■□□□ 1.02
LAMP1-203ENST00000472564 NPHP1O15259 732 aa21.39■■□□□ 1.01
LAMP1-203ENST00000472564 HTATSF1O43719 755 aaKnown RBP21.38■■□□□ 1.01
LAMP1-203ENST00000472564 PTPRGP23470 1445 aa21.37■■□□□ 1.01
LAMP1-203ENST00000472564 RRBP1Q9P2E9 1410 aaKnown RBP21.37■■□□□ 1.01
LAMP1-203ENST00000472564 HDAC5Q9UQL6 1122 aa21.37■■□□□ 1.01
LAMP1-203ENST00000472564 GNL2Q13823 731 aaKnown RBP21.37■■□□□ 1.01
LAMP1-203ENST00000472564 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
LAMP1-203ENST00000472564 EVC2Q86UK5 1308 aa21.36■■□□□ 1.01
LAMP1-203ENST00000472564 VGFO15240 615 aaPredicted RBP21.35■■□□□ 1.01
LAMP1-203ENST00000472564 ARID3AQ99856 593 aa21.35■■□□□ 1.01
LAMP1-203ENST00000472564 TULP1O00294 542 aaPredicted RBP21.34■■□□□ 1.01
LAMP1-203ENST00000472564 GPATCH3Q96I76 525 aa21.34■■□□□ 1.01
LAMP1-203ENST00000472564 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
LAMP1-203ENST00000472564 DDX49Q9Y6V7 483 aaKnown RBP21.34■■□□□ 1.01
LAMP1-203ENST00000472564 GAPVD1Q14C86 1478 aa21.34■■□□□ 1.01
LAMP1-203ENST00000472564 NGDNQ8NEJ9 315 aaKnown RBP21.34■■□□□ 1.01
LAMP1-203ENST00000472564 AMPHP49418 695 aa21.33■■□□□ 1.01
LAMP1-203ENST00000472564 DDX19BQ9UMR2 479 aa21.33■■□□□ 1
LAMP1-203ENST00000472564 NUTM2FA1L443 756 aa21.32■■□□□ 1
LAMP1-203ENST00000472564 FOXD4L5Q5VV16 416 aaPredicted RBP21.32■■□□□ 1
LAMP1-203ENST00000472564 FOXD4L4Q8WXT5 416 aaPredicted RBP21.32■■□□□ 1
LAMP1-203ENST00000472564 CUX1P39880 1505 aa21.32■■□□□ 1
LAMP1-203ENST00000472564 DZIP1LQ8IYY4 767 aaKnown RBP21.32■■□□□ 1
LAMP1-203ENST00000472564 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
LAMP1-203ENST00000472564 CSB-PGBD3P0DP91 1061 aa21.3■■□□□ 1
LAMP1-203ENST00000472564 NCOA2Q15596 1464 aa21.3■■□□□ 1
LAMP1-203ENST00000472564 BRD4O60885 1362 aaPredicted RBP21.3■■□□□ 1
LAMP1-203ENST00000472564 CSPP1Q1MSJ5 1256 aa21.3■■□□□ 1
LAMP1-203ENST00000472564 SKOR2Q2VWA4 1001 aaPredicted RBP21.29■■□□□ 1
LAMP1-203ENST00000472564 ZNF330Q9Y3S2 320 aaPredicted RBP21.28■■□□□ 1
LAMP1-203ENST00000472564 ANKRD50Q9ULJ7 1429 aa21.28■■□□□ 1
LAMP1-203ENST00000472564 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
LAMP1-203ENST00000472564 MIA2Q96PC5 1412 aa21.27■■□□□ 1
LAMP1-203ENST00000472564 PHF14O94880 888 aa21.27■■□□□ 1
LAMP1-203ENST00000472564 RUNDC1Q96C34 613 aa21.27■□□□□ 0.99
LAMP1-203ENST00000472564 MINK1Q8N4C8 1332 aaPredicted RBP21.26■□□□□ 0.99
LAMP1-203ENST00000472564 ADAMTS8Q9UP79 889 aa21.26■□□□□ 0.99
LAMP1-203ENST00000472564 CDCA7LQ96GN5 454 aa21.26■□□□□ 0.99
LAMP1-203ENST00000472564 RILPL2Q969X0 211 aa21.26■□□□□ 0.99
LAMP1-203ENST00000472564 COG3Q96JB2 828 aa21.26■□□□□ 0.99
LAMP1-203ENST00000472564 GORABQ5T7V8 394 aa21.25■□□□□ 0.99
LAMP1-203ENST00000472564 CHMP5Q9NZZ3 219 aa21.25■□□□□ 0.99
LAMP1-203ENST00000472564 DIAPH1O60610 1272 aaKnown RBP21.25■□□□□ 0.99
LAMP1-203ENST00000472564 RSPH6AQ9H0K4 717 aa21.25■□□□□ 0.99
LAMP1-203ENST00000472564 CHMP3Q9Y3E7 222 aa21.25■□□□□ 0.99
LAMP1-203ENST00000472564 KIF16BQ96L93 1317 aa21.25■□□□□ 0.99
LAMP1-203ENST00000472564 RIPK4P57078 832 aa21.25■□□□□ 0.99
LAMP1-203ENST00000472564 HSP90B1P14625 803 aaKnown RBP21.24■□□□□ 0.99
LAMP1-203ENST00000472564 STAC3Q96MF2 364 aa21.24■□□□□ 0.99
LAMP1-203ENST00000472564 FYCO1Q9BQS8 1478 aa21.24■□□□□ 0.99
LAMP1-203ENST00000472564 EID1Q9Y6B2 187 aa21.23■□□□□ 0.99
LAMP1-203ENST00000472564 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
LAMP1-203ENST00000472564 NFKBIBQ15653 356 aa21.22■□□□□ 0.99
LAMP1-203ENST00000472564 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
LAMP1-203ENST00000472564 PANK1Q8TE04 598 aa21.22■□□□□ 0.99
LAMP1-203ENST00000472564 API5Q9BZZ5 524 aaKnown RBP21.2■□□□□ 0.98
LAMP1-203ENST00000472564 REC8O95072 547 aa21.2■□□□□ 0.98
LAMP1-203ENST00000472564 NBPF8Q3BBV2 869 aa21.19■□□□□ 0.98
LAMP1-203ENST00000472564 FOXD4L6Q3SYB3 417 aaPredicted RBP21.19■□□□□ 0.98
LAMP1-203ENST00000472564 FOXD4L3Q6VB84 417 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms