RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ESF1Q9H501 851 aaKnown RBP25.02■■□□□ 1.6
CCM2-205ENST00000472223 KANK1Q14678 1352 aa25.02■■□□□ 1.6
CCM2-205ENST00000472223 RAB3GAP2Q9H2M9 1393 aa25.01■■□□□ 1.59
CCM2-205ENST00000472223 MLECQ14165 292 aa25■■□□□ 1.59
CCM2-205ENST00000472223 BCORL1Q5H9F3 1711 aa24.99■■□□□ 1.59
CCM2-205ENST00000472223 PPP6R1Q9UPN7 881 aa24.98■■□□□ 1.59
CCM2-205ENST00000472223 RNF17Q9BXT8 1623 aaKnown RBP24.94■■□□□ 1.58
CCM2-205ENST00000472223 NUP155O75694 1391 aa24.93■■□□□ 1.58
CCM2-205ENST00000472223 WASHC2CQ9Y4E1 1318 aa24.93■■□□□ 1.58
CCM2-205ENST00000472223 DEPDC5O75140 1603 aa24.91■■□□□ 1.58
CCM2-205ENST00000472223 UNC13BO14795 1591 aa24.91■■□□□ 1.58
CCM2-205ENST00000472223 SIGLEC1Q9BZZ2 1709 aa24.91■■□□□ 1.58
CCM2-205ENST00000472223 PRDM15P57071 1507 aaPredicted RBP24.87■■□□□ 1.57
CCM2-205ENST00000472223 SLC4A1APQ9BWU0 796 aaKnown RBP24.86■■□□□ 1.57
CCM2-205ENST00000472223 FAM135AQ9P2D6 1515 aa24.86■■□□□ 1.57
CCM2-205ENST00000472223 KDM5DQ9BY66 1539 aa24.84■■□□□ 1.57
CCM2-205ENST00000472223 CNTLNQ9NXG0 1405 aa24.84■■□□□ 1.57
CCM2-205ENST00000472223 ZC3H13Q5T200 1668 aaKnown RBP24.84■■□□□ 1.57
CCM2-205ENST00000472223 IQGAP3Q86VI3 1631 aa24.82■■□□□ 1.56
CCM2-205ENST00000472223 MROH1Q8NDA8 1641 aa24.82■■□□□ 1.56
CCM2-205ENST00000472223 FER1L4A9Z1Z3 1794 aa24.81■■□□□ 1.56
CCM2-205ENST00000472223 MPHOSPH9Q99550 1183 aa24.81■■□□□ 1.56
CCM2-205ENST00000472223 CLTCQ00610 1675 aaKnown RBP24.79■■□□□ 1.56
CCM2-205ENST00000472223 CEP152O94986 1710 aa24.79■■□□□ 1.56
CCM2-205ENST00000472223 ABCC3O15438 1527 aa24.78■■□□□ 1.56
CCM2-205ENST00000472223 VWDEQ8N2E2 1590 aa24.78■■□□□ 1.56
CCM2-205ENST00000472223 LMTK2Q8IWU2 1503 aa24.76■■□□□ 1.55
CCM2-205ENST00000472223 TET3O43151 1660 aa24.75■■□□□ 1.55
CCM2-205ENST00000472223 ADAMTSL3P82987 1691 aa24.75■■□□□ 1.55
CCM2-205ENST00000472223 PKD2Q13563 968 aa24.74■■□□□ 1.55
CCM2-205ENST00000472223 CAMSAP1Q5T5Y3 1602 aa24.73■■□□□ 1.55
CCM2-205ENST00000472223 PZPP20742 1482 aa24.73■■□□□ 1.55
CCM2-205ENST00000472223 ZMYM3Q14202 1370 aa24.73■■□□□ 1.55
CCM2-205ENST00000472223 MROH2AA6NES4 1674 aa24.72■■□□□ 1.55
CCM2-205ENST00000472223 MADDQ8WXG6 1647 aa24.72■■□□□ 1.55
CCM2-205ENST00000472223 RIMS1Q86UR5 1692 aaKnown RBP24.71■■□□□ 1.55
CCM2-205ENST00000472223 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
CCM2-205ENST00000472223 PLPPR3Q6T4P5 718 aa24.69■■□□□ 1.54
CCM2-205ENST00000472223 RPRD2Q5VT52 1461 aaKnown RBP24.69■■□□□ 1.54
CCM2-205ENST00000472223 ARHGAP31Q2M1Z3 1444 aa24.69■■□□□ 1.54
CCM2-205ENST00000472223 CCER1Q8TC90 406 aaPredicted RBP24.66■■□□□ 1.54
CCM2-205ENST00000472223 CFAP65Q6ZU64 1925 aaKnown RBP24.66■■□□□ 1.54
CCM2-205ENST00000472223 E9PCH4 1651 aa24.65■■□□□ 1.54
CCM2-205ENST00000472223 DHX57Q6P158 1386 aaKnown RBP24.64■■□□□ 1.53
CCM2-205ENST00000472223 NPATQ14207 1427 aa24.63■■□□□ 1.53
CCM2-205ENST00000472223 FOXD1Q16676 465 aa24.62■■□□□ 1.53
CCM2-205ENST00000472223 C3P01024 1663 aa24.62■■□□□ 1.53
CCM2-205ENST00000472223 KDM4FA0A1W2PPD8 638 aa24.61■■□□□ 1.53
CCM2-205ENST00000472223 CEBPAP49715 358 aaPredicted RBP24.61■■□□□ 1.53
CCM2-205ENST00000472223 PTPRMP28827 1452 aa24.59■■□□□ 1.53
CCM2-205ENST00000472223 FBXO31Q5XUX0 539 aaPredicted RBP24.58■■□□□ 1.53
CCM2-205ENST00000472223 PREX1Q8TCU6 1659 aa24.57■■□□□ 1.52
CCM2-205ENST00000472223 SPHKAPQ2M3C7 1700 aa24.57■■□□□ 1.52
CCM2-205ENST00000472223 ERVK-7P63135 1459 aa24.55■■□□□ 1.52
CCM2-205ENST00000472223 SLC52A1Q9NWF4 448 aa24.54■■□□□ 1.52
CCM2-205ENST00000472223 TNRQ92752 1358 aa24.54■■□□□ 1.52
CCM2-205ENST00000472223 CLSPNQ9HAW4 1339 aa24.53■■□□□ 1.52
CCM2-205ENST00000472223 CCDC144AA2RUR9 1427 aa24.52■■□□□ 1.52
CCM2-205ENST00000472223 PTPRTO14522 1441 aa24.52■■□□□ 1.52
CCM2-205ENST00000472223 SPATA31D1Q6ZQQ2 1576 aa24.52■■□□□ 1.52
CCM2-205ENST00000472223 NOS1P29475 1434 aa24.52■■□□□ 1.52
CCM2-205ENST00000472223 STAG3Q9UJ98 1225 aa24.51■■□□□ 1.51
CCM2-205ENST00000472223 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
CCM2-205ENST00000472223 SETD1BQ9UPS6 1966 aaKnown RBP24.51■■□□□ 1.51
CCM2-205ENST00000472223 TRPM2O94759 1503 aa24.5■■□□□ 1.51
CCM2-205ENST00000472223 CHGAP10645 457 aaKnown RBP24.47■■□□□ 1.51
CCM2-205ENST00000472223 NLRP1Q9C000 1473 aa24.45■■□□□ 1.5
CCM2-205ENST00000472223 NEUROD1Q13562 356 aa24.44■■□□□ 1.5
CCM2-205ENST00000472223 IDI1Q13907 227 aa24.44■■□□□ 1.5
CCM2-205ENST00000472223 SYNMO15061 1565 aa24.44■■□□□ 1.5
CCM2-205ENST00000472223 PLA2R1Q13018 1463 aa24.44■■□□□ 1.5
CCM2-205ENST00000472223 KIF1BO60333 1816 aa24.42■■□□□ 1.5
CCM2-205ENST00000472223 UHRF1BP1Q6BDS2 1440 aa24.4■■□□□ 1.5
CCM2-205ENST00000472223 CLTCL1P53675 1640 aa24.39■■□□□ 1.5
CCM2-205ENST00000472223 SIN3AQ96ST3 1273 aa24.39■■□□□ 1.49
CCM2-205ENST00000472223 PIK3C2BO00750 1634 aa24.39■■□□□ 1.49
CCM2-205ENST00000472223 ZNF326Q5BKZ1 582 aaKnown RBP24.38■■□□□ 1.49
CCM2-205ENST00000472223 MYO3AQ8NEV4 1616 aa24.38■■□□□ 1.49
CCM2-205ENST00000472223 UGGT1Q9NYU2 1555 aa24.37■■□□□ 1.49
CCM2-205ENST00000472223 AEBP2Q6ZN18 517 aaPredicted RBP24.37■■□□□ 1.49
CCM2-205ENST00000472223 THEMISQ8N1K5 641 aaPredicted RBP24.36■■□□□ 1.49
CCM2-205ENST00000472223 A2ML1A8K2U0 1454 aa24.35■■□□□ 1.49
CCM2-205ENST00000472223 HDGFP51858 240 aaKnown RBP24.35■■□□□ 1.49
CCM2-205ENST00000472223 RGL3Q3MIN7 710 aa24.34■■□□□ 1.49
CCM2-205ENST00000472223 TONSLQ96HA7 1378 aa24.32■■□□□ 1.48
CCM2-205ENST00000472223 KDM5AP29375 1690 aaKnown RBP24.32■■□□□ 1.48
CCM2-205ENST00000472223 CEP170BQ9Y4F5 1589 aaPredicted RBP24.32■■□□□ 1.48
CCM2-205ENST00000472223 ADGRB3O60242 1522 aa24.31■■□□□ 1.48
CCM2-205ENST00000472223 TMEM131LA2VDJ0 1609 aa24.29■■□□□ 1.48
CCM2-205ENST00000472223 TIMELESSQ9UNS1 1208 aa24.29■■□□□ 1.48
CCM2-205ENST00000472223 ZNF142P52746 1687 aaPredicted RBP24.29■■□□□ 1.48
CCM2-205ENST00000472223 RPGRIP1LQ68CZ1 1315 aa24.29■■□□□ 1.48
CCM2-205ENST00000472223 UBR1Q8IWV7 1749 aa24.28■■□□□ 1.48
CCM2-205ENST00000472223 NEURL4Q96JN8 1562 aa24.28■■□□□ 1.48
CCM2-205ENST00000472223 EID1Q9Y6B2 187 aa24.27■■□□□ 1.48
CCM2-205ENST00000472223 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.26■■□□□ 1.47
CCM2-205ENST00000472223 STAC3Q96MF2 364 aa24.26■■□□□ 1.47
CCM2-205ENST00000472223 MYO5BQ9ULV0 1848 aa24.26■■□□□ 1.47
CCM2-205ENST00000472223 SPATA31E1Q6ZUB1 1445 aa24.25■■□□□ 1.47
CCM2-205ENST00000472223 PPP1R15AO75807 674 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms