RNA–Protein interactions for RNA: ENST00000472033.1

ABCA4-205, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-205ENST00000472033 NBR1Q14596 966 aa12.37□□□□□ -0.43
ABCA4-205ENST00000472033 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
ABCA4-205ENST00000472033 ADAM33Q9BZ11 813 aa12.37□□□□□ -0.43
ABCA4-205ENST00000472033 BCL2L12Q9HB09 334 aa12.37□□□□□ -0.43
ABCA4-205ENST00000472033 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
ABCA4-205ENST00000472033 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
ABCA4-205ENST00000472033 PSEN2P49810 448 aa12.34□□□□□ -0.43
ABCA4-205ENST00000472033 RBM33Q96EV2 1170 aaKnown RBP12.34□□□□□ -0.43
ABCA4-205ENST00000472033 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
ABCA4-205ENST00000472033 PTPREP23469 700 aa12.33□□□□□ -0.44
ABCA4-205ENST00000472033 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
ABCA4-205ENST00000472033 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
ABCA4-205ENST00000472033 SEMA3EO15041 775 aa12.31□□□□□ -0.44
ABCA4-205ENST00000472033 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
ABCA4-205ENST00000472033 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
ABCA4-205ENST00000472033 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
ABCA4-205ENST00000472033 MAP3K7O43318 606 aa12.29□□□□□ -0.44
ABCA4-205ENST00000472033 OSBPP22059 807 aa12.28□□□□□ -0.44
ABCA4-205ENST00000472033 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.45
ABCA4-205ENST00000472033 C6orf132Q5T0Z8 1188 aa12.27□□□□□ -0.45
ABCA4-205ENST00000472033 PPP1R3GB7ZBB8 358 aa12.25□□□□□ -0.45
ABCA4-205ENST00000472033 TSR1Q2NL82 804 aaKnown RBP12.25□□□□□ -0.45
ABCA4-205ENST00000472033 TESPA1A2RU30 521 aaPredicted RBP12.24□□□□□ -0.45
ABCA4-205ENST00000472033 COL9A1P20849 921 aa12.24□□□□□ -0.45
ABCA4-205ENST00000472033 SPNS2Q8IVW8 549 aa12.23□□□□□ -0.45
ABCA4-205ENST00000472033 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
ABCA4-205ENST00000472033 TK2O00142 265 aa12.21□□□□□ -0.45
ABCA4-205ENST00000472033 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
ABCA4-205ENST00000472033 SMYD5Q6GMV2 418 aa12.19□□□□□ -0.46
ABCA4-205ENST00000472033 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
ABCA4-205ENST00000472033 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
ABCA4-205ENST00000472033 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
ABCA4-205ENST00000472033 VPS9D1Q9Y2B5 631 aa12.19□□□□□ -0.46
ABCA4-205ENST00000472033 PROX2Q3B8N5 592 aa12.16□□□□□ -0.46
ABCA4-205ENST00000472033 EIF4G1Q04637 1599 aaKnown RBP12.16□□□□□ -0.46
ABCA4-205ENST00000472033 CC2D2AQ9P2K1 1620 aa12.15□□□□□ -0.47
ABCA4-205ENST00000472033 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
ABCA4-205ENST00000472033 HRO43593 1189 aa12.13□□□□□ -0.47
ABCA4-205ENST00000472033 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
ABCA4-205ENST00000472033 RBM26Q5T8P6 1007 aaKnown RBP12.12□□□□□ -0.47
ABCA4-205ENST00000472033 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
ABCA4-205ENST00000472033 CECR2Q9BXF3 1484 aa12.11□□□□□ -0.47
ABCA4-205ENST00000472033 TULP1O00294 542 aaPredicted RBP12.11□□□□□ -0.47
ABCA4-205ENST00000472033 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
ABCA4-205ENST00000472033 MYT1LQ9UL68 1186 aa12.11□□□□□ -0.47
ABCA4-205ENST00000472033 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
ABCA4-205ENST00000472033 PRSS12P56730 875 aa12.09□□□□□ -0.47
ABCA4-205ENST00000472033 NPDC1Q9NQX5 325 aaPredicted RBP12.09□□□□□ -0.47
ABCA4-205ENST00000472033 RABGEF1Q9UJ41 708 aa12.09□□□□□ -0.47
ABCA4-205ENST00000472033 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
ABCA4-205ENST00000472033 KIAA1468Q9P260 1216 aa12.08□□□□□ -0.48
ABCA4-205ENST00000472033 BHMG1C9JSJ3 638 aaPredicted RBP12.07□□□□□ -0.48
ABCA4-205ENST00000472033 ONECUT3O60422 494 aaPredicted RBP12.07□□□□□ -0.48
ABCA4-205ENST00000472033 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
ABCA4-205ENST00000472033 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
ABCA4-205ENST00000472033 PTGDRQ13258 359 aa12.06□□□□□ -0.48
ABCA4-205ENST00000472033 PACS2Q86VP3 889 aa12.05□□□□□ -0.48
ABCA4-205ENST00000472033 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
ABCA4-205ENST00000472033 RNF166Q96A37 237 aaPredicted RBP12.05□□□□□ -0.48
ABCA4-205ENST00000472033 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
ABCA4-205ENST00000472033 FCHSD2O94868 740 aa12.04□□□□□ -0.48
ABCA4-205ENST00000472033 PADI6Q6TGC4 694 aa12.04□□□□□ -0.48
ABCA4-205ENST00000472033 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.49
ABCA4-205ENST00000472033 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
ABCA4-205ENST00000472033 GOLGA8CPA6NN73 597 aa12□□□□□ -0.49
ABCA4-205ENST00000472033 SEPT9Q9UHD8 586 aaPredicted RBP12□□□□□ -0.49
ABCA4-205ENST00000472033 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
ABCA4-205ENST00000472033 TTC13Q8NBP0 860 aa11.99□□□□□ -0.49
ABCA4-205ENST00000472033 LAPTM4BQ86VI4 370 aa11.98□□□□□ -0.49
ABCA4-205ENST00000472033 GPR37O15354 613 aa11.97□□□□□ -0.49
ABCA4-205ENST00000472033 HIC1Q14526 733 aa11.97□□□□□ -0.49
ABCA4-205ENST00000472033 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
ABCA4-205ENST00000472033 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
ABCA4-205ENST00000472033 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
ABCA4-205ENST00000472033 C3orf80F5H4A9 247 aa11.96□□□□□ -0.49
ABCA4-205ENST00000472033 SMAPO00193 183 aa11.96□□□□□ -0.49
ABCA4-205ENST00000472033 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.49
ABCA4-205ENST00000472033 TATDN2Q93075 761 aa11.96□□□□□ -0.49
ABCA4-205ENST00000472033 FAM98CQ17RN3 349 aaKnown RBP11.95□□□□□ -0.5
ABCA4-205ENST00000472033 NUDT18Q6ZVK8 323 aa11.95□□□□□ -0.5
ABCA4-205ENST00000472033 WNT2BQ93097 391 aa11.95□□□□□ -0.5
ABCA4-205ENST00000472033 GNPATO15228 680 aa11.93□□□□□ -0.5
ABCA4-205ENST00000472033 BCANQ96GW7 911 aa11.93□□□□□ -0.5
ABCA4-205ENST00000472033 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
ABCA4-205ENST00000472033 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
ABCA4-205ENST00000472033 FECHP22830 423 aa11.9□□□□□ -0.5
ABCA4-205ENST00000472033 FAM161AQ3B820 660 aa11.89□□□□□ -0.51
ABCA4-205ENST00000472033 ADGRG1Q9Y653 693 aa11.89□□□□□ -0.51
ABCA4-205ENST00000472033 THSD4Q6ZMP0 1018 aa11.88□□□□□ -0.51
ABCA4-205ENST00000472033 RBM46Q8TBY0 533 aaKnown RBP11.87□□□□□ -0.51
ABCA4-205ENST00000472033 EYA1Q99502 592 aa11.87□□□□□ -0.51
ABCA4-205ENST00000472033 BCAMP50895 628 aa11.86□□□□□ -0.51
ABCA4-205ENST00000472033 HCSTQ9UBK5 93 aa11.86□□□□□ -0.51
ABCA4-205ENST00000472033 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
ABCA4-205ENST00000472033 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
ABCA4-205ENST00000472033 SOWAHBA6NEL2 793 aa11.84□□□□□ -0.51
ABCA4-205ENST00000472033 PTPN5P54829 565 aa11.84□□□□□ -0.51
ABCA4-205ENST00000472033 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
ABCA4-205ENST00000472033 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.84□□□□□ -0.51
ABCA4-205ENST00000472033 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms