RNA–Protein interactions for RNA: ENST00000471979.6

PACRGL-205, Transcript of parkin coregulated like, humanhuman

TSL 2

Gene PACRGL, Length 1,394 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-205ENST00000471979 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.652e-6■■■□□ 17.2
PACRGL-205ENST00000471979 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
PACRGL-205ENST00000471979 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
PACRGL-205ENST00000471979 FOSBP53539 338 aa10.99□□□□□ -0.65
PACRGL-205ENST00000471979 TTLL12Q14166 644 aaPredicted RBP10.99□□□□□ -0.65
PACRGL-205ENST00000471979 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
PACRGL-205ENST00000471979 NUDT7P0C024 238 aa10.97□□□□□ -0.65
PACRGL-205ENST00000471979 FBXW7Q969H0 707 aa10.97□□□□□ -0.65
PACRGL-205ENST00000471979 PHOX2BQ99453 314 aa10.97□□□□□ -0.65
PACRGL-205ENST00000471979 DAXXQ9UER7 740 aaPredicted RBP10.97□□□□□ -0.65
PACRGL-205ENST00000471979 ARSIQ5FYB1 569 aa10.96□□□□□ -0.65
PACRGL-205ENST00000471979 GIGYF2Q6Y7W6 1299 aaKnown RBP10.95□□□□□ -0.66
PACRGL-205ENST00000471979 MS4A1P11836 297 aa10.94□□□□□ -0.66
PACRGL-205ENST00000471979 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
PACRGL-205ENST00000471979 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
PACRGL-205ENST00000471979 DDRGK1Q96HY6 314 aa10.94□□□□□ -0.66
PACRGL-205ENST00000471979 C6orf132Q5T0Z8 1188 aa10.93□□□□□ -0.66
PACRGL-205ENST00000471979 DOK7Q18PE1 504 aa10.92□□□□□ -0.66
PACRGL-205ENST00000471979 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
PACRGL-205ENST00000471979 ZDHHC16Q969W1 377 aa10.92□□□□□ -0.66
PACRGL-205ENST00000471979 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
PACRGL-205ENST00000471979 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
PACRGL-205ENST00000471979 PADI6Q6TGC4 694 aa10.91□□□□□ -0.66
PACRGL-205ENST00000471979 MDM2Q00987 491 aaPredicted RBP10.9□□□□□ -0.67
PACRGL-205ENST00000471979 NLRP7Q8WX94 980 aa10.9□□□□□ -0.67
PACRGL-205ENST00000471979 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
PACRGL-205ENST00000471979 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
PACRGL-205ENST00000471979 CLCN1P35523 988 aa10.87□□□□□ -0.67
PACRGL-205ENST00000471979 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
PACRGL-205ENST00000471979 CERKQ8TCT0 537 aa10.87□□□□□ -0.67
PACRGL-205ENST00000471979 GPCPD1Q9NPB8 672 aa10.87□□□□□ -0.67
PACRGL-205ENST00000471979 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
PACRGL-205ENST00000471979 RIMBP2O15034 1052 aa10.86□□□□□ -0.67
PACRGL-205ENST00000471979 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
PACRGL-205ENST00000471979 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
PACRGL-205ENST00000471979 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
PACRGL-205ENST00000471979 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
PACRGL-205ENST00000471979 RBM27Q9P2N5 1060 aaKnown RBP10.83□□□□□ -0.68
PACRGL-205ENST00000471979 OATP04181 439 aa10.82□□□□□ -0.68
PACRGL-205ENST00000471979 COL9A1P20849 921 aa10.82□□□□□ -0.68
PACRGL-205ENST00000471979 PRSS12P56730 875 aa10.82□□□□□ -0.68
PACRGL-205ENST00000471979 FAM198AQ9UFP1 575 aa10.82□□□□□ -0.68
PACRGL-205ENST00000471979 SSTR3P32745 418 aaPredicted RBP10.81□□□□□ -0.68
PACRGL-205ENST00000471979 MAMSTRQ6ZN01 415 aa10.81□□□□□ -0.68
PACRGL-205ENST00000471979 CDCA7LQ96GN5 454 aa10.81□□□□□ -0.68
PACRGL-205ENST00000471979 GOPCQ9HD26 462 aa10.81□□□□□ -0.68
PACRGL-205ENST00000471979 SUPT5HO00267 1087 aaKnown RBP10.8□□□□□ -0.68
PACRGL-205ENST00000471979 FAM217BQ9NTX9 383 aaPredicted RBP10.8□□□□□ -0.68
PACRGL-205ENST00000471979 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.68
PACRGL-205ENST00000471979 BEGAINQ9BUH8 593 aa10.77□□□□□ -0.68
PACRGL-205ENST00000471979 BCL2L12Q9HB09 334 aa10.77□□□□□ -0.68
PACRGL-205ENST00000471979 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
PACRGL-205ENST00000471979 C3orf80F5H4A9 247 aa10.76□□□□□ -0.69
PACRGL-205ENST00000471979 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
PACRGL-205ENST00000471979 HOXB1P14653 301 aaPredicted RBP10.75□□□□□ -0.69
PACRGL-205ENST00000471979 PCMTD1Q96MG8 357 aaPredicted RBP10.75□□□□□ -0.69
PACRGL-205ENST00000471979 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
PACRGL-205ENST00000471979 PSDA5PKW4 1024 aaPredicted RBP10.73□□□□□ -0.69
PACRGL-205ENST00000471979 PPP1R3GB7ZBB8 358 aa10.73□□□□□ -0.69
PACRGL-205ENST00000471979 EYA1Q99502 592 aa10.73□□□□□ -0.69
PACRGL-205ENST00000471979 ZMYND15Q9H091 742 aa10.73□□□□□ -0.69
PACRGL-205ENST00000471979 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
PACRGL-205ENST00000471979 PTPREP23469 700 aa10.72□□□□□ -0.69
PACRGL-205ENST00000471979 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
PACRGL-205ENST00000471979 SKIV2LQ15477 1246 aaKnown RBP10.7□□□□□ -0.7
PACRGL-205ENST00000471979 PROCA1Q8NCQ7 364 aaPredicted RBP10.7□□□□□ -0.7
PACRGL-205ENST00000471979 SNPHO15079 494 aa10.69□□□□□ -0.7
PACRGL-205ENST00000471979 NUDT18Q6ZVK8 323 aa10.69□□□□□ -0.7
PACRGL-205ENST00000471979 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
PACRGL-205ENST00000471979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.68□□□□□ -0.7
PACRGL-205ENST00000471979 MYSM1Q5VVJ2 828 aa10.68□□□□□ -0.7
PACRGL-205ENST00000471979 OTUD5Q96G74 571 aa10.68□□□□□ -0.7
PACRGL-205ENST00000471979 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
PACRGL-205ENST00000471979 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
PACRGL-205ENST00000471979 TRIM6-TRIM34B2RNG4 842 aa10.67□□□□□ -0.7
PACRGL-205ENST00000471979 PROX2Q3B8N5 592 aa10.67□□□□□ -0.7
PACRGL-205ENST00000471979 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
PACRGL-205ENST00000471979 TBC1D2Q9BYX2 928 aa10.66□□□□□ -0.7
PACRGL-205ENST00000471979 FLIIQ13045 1269 aa10.65□□□□□ -0.7
PACRGL-205ENST00000471979 TATDN2Q93075 761 aa10.65□□□□□ -0.7
PACRGL-205ENST00000471979 PNMA3Q9UL41 463 aa10.65□□□□□ -0.7
PACRGL-205ENST00000471979 SMAPO00193 183 aa10.65□□□□□ -0.71
PACRGL-205ENST00000471979 ARXQ96QS3 562 aa10.65□□□□□ -0.71
PACRGL-205ENST00000471979 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.65□□□□□ -0.71
PACRGL-205ENST00000471979 NBPF26B4DH59 902 aa10.64□□□□□ -0.71
PACRGL-205ENST00000471979 CD46P15529 392 aa10.64□□□□□ -0.71
PACRGL-205ENST00000471979 DNAJB2P25686 324 aa10.63□□□□□ -0.71
PACRGL-205ENST00000471979 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
PACRGL-205ENST00000471979 FBXO31Q5XUX0 539 aaPredicted RBP10.63□□□□□ -0.71
PACRGL-205ENST00000471979 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
PACRGL-205ENST00000471979 MCM6Q14566 821 aa10.61□□□□□ -0.71
PACRGL-205ENST00000471979 PACS2Q86VP3 889 aa10.61□□□□□ -0.71
PACRGL-205ENST00000471979 SPIRE2Q8WWL2 714 aa10.61□□□□□ -0.71
PACRGL-205ENST00000471979 LIMD1Q9UGP4 676 aa10.61□□□□□ -0.71
PACRGL-205ENST00000471979 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
PACRGL-205ENST00000471979 DDX11L8A8MPP1 907 aa10.6□□□□□ -0.71
PACRGL-205ENST00000471979 PSEN2P49810 448 aa10.6□□□□□ -0.71
PACRGL-205ENST00000471979 ZBED2Q9BTP6 218 aa10.6□□□□□ -0.71
PACRGL-205ENST00000471979 POTEEQ6S8J3 1075 aa10.59□□□□□ -0.71
PACRGL-205ENST00000471979 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms