RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 PDE4AP27815 886 aa7.42□□□□□ -1.22
LRCH3-213ENST00000471667 FANCD2Q9BXW9 1451 aa7.42□□□□□ -1.22
LRCH3-213ENST00000471667 TK2O00142 265 aa7.41□□□□□ -1.22
LRCH3-213ENST00000471667 DISP3Q9P2K9 1392 aa7.4□□□□□ -1.22
LRCH3-213ENST00000471667 SMARCA4P51532 1647 aa7.4□□□□□ -1.22
LRCH3-213ENST00000471667 IFT140Q96RY7 1462 aa7.39□□□□□ -1.23
LRCH3-213ENST00000471667 KCNK17Q96T54 332 aa7.39□□□□□ -1.23
LRCH3-213ENST00000471667 LARP6Q9BRS8 491 aaKnown RBP7.39□□□□□ -1.23
LRCH3-213ENST00000471667 HRO43593 1189 aa7.38□□□□□ -1.23
LRCH3-213ENST00000471667 ZNF454Q8N9F8 522 aa7.38□□□□□ -1.23
LRCH3-213ENST00000471667 KCNH8Q96L42 1107 aa7.38□□□□□ -1.23
LRCH3-213ENST00000471667 DDX27Q96GQ7 796 aaKnown RBP7.37□□□□□ -1.23
LRCH3-213ENST00000471667 HCSTQ9UBK5 93 aa7.37□□□□□ -1.23
LRCH3-213ENST00000471667 FOSBP53539 338 aa7.35□□□□□ -1.23
LRCH3-213ENST00000471667 MFSD10Q14728 455 aa7.35□□□□□ -1.23
LRCH3-213ENST00000471667 BCL2L12Q9HB09 334 aa7.35□□□□□ -1.23
LRCH3-213ENST00000471667 ANO8Q9HCE9 1232 aaPredicted RBP7.35□□□□□ -1.23
LRCH3-213ENST00000471667 HECW2Q9P2P5 1572 aa7.34□□□□□ -1.23
LRCH3-213ENST00000471667 ZNF608Q9ULD9 1512 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-213ENST00000471667 EVI5O60447 810 aa7.34□□□□□ -1.23
LRCH3-213ENST00000471667 STAC3Q96MF2 364 aa7.34□□□□□ -1.23
LRCH3-213ENST00000471667 VPS9D1Q9Y2B5 631 aa7.34□□□□□ -1.23
LRCH3-213ENST00000471667 PEG3Q9GZU2 1588 aa7.33□□□□□ -1.24
LRCH3-213ENST00000471667 ILDR2Q71H61 639 aa7.33□□□□□ -1.24
LRCH3-213ENST00000471667 JPH4Q96JJ6 628 aa7.33□□□□□ -1.24
LRCH3-213ENST00000471667 MAP3K9P80192 1104 aa7.32□□□□□ -1.24
LRCH3-213ENST00000471667 CADPS2Q86UW7 1296 aa7.32□□□□□ -1.24
LRCH3-213ENST00000471667 KCTD12Q96CX2 325 aaKnown RBP7.32□□□□□ -1.24
LRCH3-213ENST00000471667 URB2Q14146 1524 aaKnown RBP7.32□□□□□ -1.24
LRCH3-213ENST00000471667 CHD1O14646 1710 aa7.31□□□□□ -1.24
LRCH3-213ENST00000471667 PTPREP23469 700 aa7.31□□□□□ -1.24
LRCH3-213ENST00000471667 SLC4A5Q9BY07 1137 aa7.31□□□□□ -1.24
LRCH3-213ENST00000471667 EMILIN3Q9NT22 766 aa7.31□□□□□ -1.24
LRCH3-213ENST00000471667 PLA2G2EQ9NZK7 142 aa7.31□□□□□ -1.24
LRCH3-213ENST00000471667 SYNJ2O15056 1496 aa7.3□□□□□ -1.24
LRCH3-213ENST00000471667 GAPVD1Q14C86 1478 aa7.3□□□□□ -1.24
LRCH3-213ENST00000471667 ZDHHC16Q969W1 377 aa7.3□□□□□ -1.24
LRCH3-213ENST00000471667 EIF4G3O43432 1585 aaKnown RBP7.29□□□□□ -1.24
LRCH3-213ENST00000471667 ADAM33Q9BZ11 813 aa7.29□□□□□ -1.24
LRCH3-213ENST00000471667 SYNJ1O43426 1573 aa7.29□□□□□ -1.24
LRCH3-213ENST00000471667 CHMP7Q8WUX9 453 aaPredicted RBP7.28□□□□□ -1.24
LRCH3-213ENST00000471667 ZBED2Q9BTP6 218 aa7.28□□□□□ -1.24
LRCH3-213ENST00000471667 KDM6BO15054 1643 aa7.27□□□□□ -1.25
LRCH3-213ENST00000471667 FAM69CQ0P6D2 419 aa7.26□□□□□ -1.25
LRCH3-213ENST00000471667 ADGRL1O94910 1474 aa7.25□□□□□ -1.25
LRCH3-213ENST00000471667 BHMG1C9JSJ3 638 aaPredicted RBP7.25□□□□□ -1.25
LRCH3-213ENST00000471667 PCDHGA10Q9Y5H3 936 aa7.25□□□□□ -1.25
LRCH3-213ENST00000471667 CFTRP13569 1480 aa7.24□□□□□ -1.25
LRCH3-213ENST00000471667 CLASP1Q7Z460 1538 aa7.24□□□□□ -1.25
LRCH3-213ENST00000471667 PTPN5P54829 565 aa7.24□□□□□ -1.25
LRCH3-213ENST00000471667 BBXQ8WY36 941 aaPredicted RBP7.24□□□□□ -1.25
LRCH3-213ENST00000471667 GOLGA8CPA6NN73 597 aa7.23□□□□□ -1.25
LRCH3-213ENST00000471667 CAMK2BQ13554 666 aa7.23□□□□□ -1.25
LRCH3-213ENST00000471667 TYW1BQ6NUM6 668 aa7.23□□□□□ -1.25
LRCH3-213ENST00000471667 MRPL50Q8N5N7 158 aaKnown RBP7.23□□□□□ -1.25
LRCH3-213ENST00000471667 AQRO60306 1485 aaKnown RBP eCLIP7.23□□□□□ -1.252e-6■■■□□ 18.4
LRCH3-213ENST00000471667 PPP1R3GB7ZBB8 358 aa7.22□□□□□ -1.25
LRCH3-213ENST00000471667 DPYSL4O14531 572 aa7.22□□□□□ -1.25
LRCH3-213ENST00000471667 PHF14O94880 888 aa7.22□□□□□ -1.25
LRCH3-213ENST00000471667 THSD4Q6ZMP0 1018 aa7.22□□□□□ -1.25
LRCH3-213ENST00000471667 WNT2BQ93097 391 aa7.22□□□□□ -1.25
LRCH3-213ENST00000471667 FBXW7Q969H0 707 aa7.22□□□□□ -1.25
LRCH3-213ENST00000471667 NBPF3Q9H094 633 aa7.22□□□□□ -1.25
LRCH3-213ENST00000471667 ABCC8Q09428 1581 aa7.21□□□□□ -1.25
LRCH3-213ENST00000471667 COL9A1P20849 921 aa7.21□□□□□ -1.26
LRCH3-213ENST00000471667 PROX2Q3B8N5 592 aa7.2□□□□□ -1.26
LRCH3-213ENST00000471667 SPATA31D1Q6ZQQ2 1576 aa7.19□□□□□ -1.26
LRCH3-213ENST00000471667 MROH2BQ7Z745 1585 aa7.19□□□□□ -1.26
LRCH3-213ENST00000471667 EPAS1Q99814 870 aa7.18□□□□□ -1.26
LRCH3-213ENST00000471667 RABGEF1Q9UJ41 708 aa7.18□□□□□ -1.26
LRCH3-213ENST00000471667 ABCC10Q5T3U5 1492 aa7.17□□□□□ -1.26
LRCH3-213ENST00000471667 SPRYD3Q8NCJ5 442 aa7.17□□□□□ -1.26
LRCH3-213ENST00000471667 KIF13AQ9H1H9 1805 aa7.17□□□□□ -1.26
LRCH3-213ENST00000471667 TOPBP1Q92547 1522 aa7.17□□□□□ -1.26
LRCH3-213ENST00000471667 C6orf132Q5T0Z8 1188 aa7.16□□□□□ -1.26
LRCH3-213ENST00000471667 DDX12PQ92771 950 aa7.16□□□□□ -1.26
LRCH3-213ENST00000471667 SNAPC4Q5SXM2 1469 aa7.16□□□□□ -1.26
LRCH3-213ENST00000471667 AMER1Q5JTC6 1135 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-213ENST00000471667 RBM33Q96EV2 1170 aaKnown RBP7.15□□□□□ -1.26
LRCH3-213ENST00000471667 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-213ENST00000471667 MAGI1Q96QZ7 1491 aaPredicted RBP7.15□□□□□ -1.27
LRCH3-213ENST00000471667 ANKK1Q8NFD2 765 aa7.14□□□□□ -1.27
LRCH3-213ENST00000471667 KIAA1468Q9P260 1216 aa7.14□□□□□ -1.27
LRCH3-213ENST00000471667 TOP2BQ02880 1626 aa7.13□□□□□ -1.27
LRCH3-213ENST00000471667 LAPTM4BQ86VI4 370 aa7.13□□□□□ -1.27
LRCH3-213ENST00000471667 ONECUT3O60422 494 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-213ENST00000471667 PDIA6Q15084 440 aa7.12□□□□□ -1.27
LRCH3-213ENST00000471667 IFFO2Q5TF58 517 aa7.12□□□□□ -1.27
LRCH3-213ENST00000471667 CERKQ8TCT0 537 aa7.12□□□□□ -1.27
LRCH3-213ENST00000471667 RTN4Q9NQC3 1192 aaKnown RBP7.12□□□□□ -1.27
LRCH3-213ENST00000471667 TRIM6-TRIM34B2RNG4 842 aa7.11□□□□□ -1.27
LRCH3-213ENST00000471667 BCAMP50895 628 aa7.11□□□□□ -1.27
LRCH3-213ENST00000471667 NBR1Q14596 966 aa7.11□□□□□ -1.27
LRCH3-213ENST00000471667 ZFRQ96KR1 1074 aaKnown RBP7.11□□□□□ -1.27
LRCH3-213ENST00000471667 SEPT9Q9UHD8 586 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-213ENST00000471667 SOWAHBA6NEL2 793 aa7.1□□□□□ -1.27
LRCH3-213ENST00000471667 SPDYE16A6NNV3 312 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-213ENST00000471667 EN1Q05925 392 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-213ENST00000471667 PAXIP1Q6ZW49 1069 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-213ENST00000471667 DNMBPQ6XZF7 1577 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms