RNA–Protein interactions for RNA: ENST00000470650.1

CCDC93-206, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-206ENST00000470650 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
CCDC93-206ENST00000470650 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
CCDC93-206ENST00000470650 NBR1Q14596 966 aa12.36□□□□□ -0.43
CCDC93-206ENST00000470650 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
CCDC93-206ENST00000470650 PTPREP23469 700 aa12.35□□□□□ -0.43
CCDC93-206ENST00000470650 COL9A1P20849 921 aa12.33□□□□□ -0.44
CCDC93-206ENST00000470650 MLLT3P42568 568 aaPredicted RBP12.33□□□□□ -0.44
CCDC93-206ENST00000470650 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
CCDC93-206ENST00000470650 EPAS1Q99814 870 aa12.33□□□□□ -0.44
CCDC93-206ENST00000470650 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
CCDC93-206ENST00000470650 TSR1Q2NL82 804 aaKnown RBP12.3□□□□□ -0.44
CCDC93-206ENST00000470650 C6orf132Q5T0Z8 1188 aa12.3□□□□□ -0.44
CCDC93-206ENST00000470650 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
CCDC93-206ENST00000470650 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
CCDC93-206ENST00000470650 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
CCDC93-206ENST00000470650 SEMA3EO15041 775 aa12.28□□□□□ -0.44
CCDC93-206ENST00000470650 MAP3K7O43318 606 aa12.28□□□□□ -0.44
CCDC93-206ENST00000470650 OSBPP22059 807 aa12.28□□□□□ -0.44
CCDC93-206ENST00000470650 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
CCDC93-206ENST00000470650 VPS9D1Q9Y2B5 631 aa12.28□□□□□ -0.44
CCDC93-206ENST00000470650 EN1Q05925 392 aaPredicted RBP12.27□□□□□ -0.45
CCDC93-206ENST00000470650 PROX2Q3B8N5 592 aa12.27□□□□□ -0.45
CCDC93-206ENST00000470650 ZBED2Q9BTP6 218 aa12.27□□□□□ -0.45
CCDC93-206ENST00000470650 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
CCDC93-206ENST00000470650 HRO43593 1189 aa12.25□□□□□ -0.45
CCDC93-206ENST00000470650 TK2O00142 265 aa12.24□□□□□ -0.45
CCDC93-206ENST00000470650 PPP1R3GB7ZBB8 358 aa12.23□□□□□ -0.45
CCDC93-206ENST00000470650 CDHR5Q9HBB8 845 aa12.23□□□□□ -0.45
CCDC93-206ENST00000470650 RNF166Q96A37 237 aaPredicted RBP12.22□□□□□ -0.45
CCDC93-206ENST00000470650 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
CCDC93-206ENST00000470650 CECR2Q9BXF3 1484 aa12.19□□□□□ -0.46
CCDC93-206ENST00000470650 CC2D2AQ9P2K1 1620 aa12.19□□□□□ -0.46
CCDC93-206ENST00000470650 BHMG1C9JSJ3 638 aaPredicted RBP12.17□□□□□ -0.46
CCDC93-206ENST00000470650 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
CCDC93-206ENST00000470650 KIAA1468Q9P260 1216 aa12.15□□□□□ -0.46
CCDC93-206ENST00000470650 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
CCDC93-206ENST00000470650 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
CCDC93-206ENST00000470650 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
CCDC93-206ENST00000470650 KCTD12Q96CX2 325 aaKnown RBP12.12□□□□□ -0.47
CCDC93-206ENST00000470650 NPDC1Q9NQX5 325 aaPredicted RBP12.12□□□□□ -0.47
CCDC93-206ENST00000470650 FAM198AQ9UFP1 575 aa12.12□□□□□ -0.47
CCDC93-206ENST00000470650 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
CCDC93-206ENST00000470650 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
CCDC93-206ENST00000470650 RABGEF1Q9UJ41 708 aa12.11□□□□□ -0.47
CCDC93-206ENST00000470650 C3orf80F5H4A9 247 aa12.1□□□□□ -0.47
CCDC93-206ENST00000470650 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
CCDC93-206ENST00000470650 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
CCDC93-206ENST00000470650 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.48
CCDC93-206ENST00000470650 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
CCDC93-206ENST00000470650 SMAPO00193 183 aa12.08□□□□□ -0.48
CCDC93-206ENST00000470650 PRSS12P56730 875 aa12.08□□□□□ -0.48
CCDC93-206ENST00000470650 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
CCDC93-206ENST00000470650 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
CCDC93-206ENST00000470650 SHROOM4Q9ULL8 1493 aa12.05□□□□□ -0.48
CCDC93-206ENST00000470650 PADI6Q6TGC4 694 aa12.04□□□□□ -0.48
CCDC93-206ENST00000470650 ONECUT3O60422 494 aaPredicted RBP12.03□□□□□ -0.48
CCDC93-206ENST00000470650 PTPN5P54829 565 aa12.03□□□□□ -0.48
CCDC93-206ENST00000470650 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
CCDC93-206ENST00000470650 CERKQ8TCT0 537 aa12.03□□□□□ -0.48
CCDC93-206ENST00000470650 WNT2BQ93097 391 aa12.03□□□□□ -0.48
CCDC93-206ENST00000470650 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
CCDC93-206ENST00000470650 PTGDRQ13258 359 aa12.02□□□□□ -0.49
CCDC93-206ENST00000470650 PNMA3Q9UL41 463 aa12□□□□□ -0.49
CCDC93-206ENST00000470650 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
CCDC93-206ENST00000470650 SMYD5Q6GMV2 418 aa11.99□□□□□ -0.49
CCDC93-206ENST00000470650 NUDT18Q6ZVK8 323 aa11.99□□□□□ -0.49
CCDC93-206ENST00000470650 TATDN2Q93075 761 aa11.99□□□□□ -0.49
CCDC93-206ENST00000470650 ZFRQ96KR1 1074 aaKnown RBP11.99□□□□□ -0.49
CCDC93-206ENST00000470650 BCAMP50895 628 aa11.98□□□□□ -0.49
CCDC93-206ENST00000470650 THSD4Q6ZMP0 1018 aa11.97□□□□□ -0.49
CCDC93-206ENST00000470650 TTC13Q8NBP0 860 aa11.97□□□□□ -0.49
CCDC93-206ENST00000470650 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.49
CCDC93-206ENST00000470650 LAPTM4BQ86VI4 370 aa11.96□□□□□ -0.49
CCDC93-206ENST00000470650 HCSTQ9UBK5 93 aa11.95□□□□□ -0.5
CCDC93-206ENST00000470650 FCHSD2O94868 740 aa11.94□□□□□ -0.5
CCDC93-206ENST00000470650 FECHP22830 423 aa11.94□□□□□ -0.5
CCDC93-206ENST00000470650 ANKK1Q8NFD2 765 aa11.94□□□□□ -0.5
CCDC93-206ENST00000470650 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
CCDC93-206ENST00000470650 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
CCDC93-206ENST00000470650 GPR37O15354 613 aa11.91□□□□□ -0.5
CCDC93-206ENST00000470650 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
CCDC93-206ENST00000470650 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
CCDC93-206ENST00000470650 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
CCDC93-206ENST00000470650 EYA1Q99502 592 aa11.88□□□□□ -0.51
CCDC93-206ENST00000470650 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.88□□□□□ -0.51
CCDC93-206ENST00000470650 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
CCDC93-206ENST00000470650 LRCH3Q96II8 777 aa11.87□□□□□ -0.51
CCDC93-206ENST00000470650 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
CCDC93-206ENST00000470650 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
CCDC93-206ENST00000470650 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
CCDC93-206ENST00000470650 HIC1Q14526 733 aa11.85□□□□□ -0.51
CCDC93-206ENST00000470650 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC93-206ENST00000470650 GNPATO15228 680 aa11.84□□□□□ -0.51
CCDC93-206ENST00000470650 RNF40O75150 1001 aa11.84□□□□□ -0.51
CCDC93-206ENST00000470650 SWT1Q5T5J6 900 aaKnown RBP11.84□□□□□ -0.51
CCDC93-206ENST00000470650 CUX2O14529 1486 aa11.83□□□□□ -0.52
CCDC93-206ENST00000470650 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
CCDC93-206ENST00000470650 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
CCDC93-206ENST00000470650 RBM46Q8TBY0 533 aaKnown RBP11.8□□□□□ -0.52
CCDC93-206ENST00000470650 NLRP7Q8WX94 980 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms