RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 UNC13BO14795 1591 aa17.72■□□□□ 0.43
RNF13-208ENST00000467996 DEPDC5O75140 1603 aa17.72■□□□□ 0.43
RNF13-208ENST00000467996 ATP10AO60312 1499 aa17.7■□□□□ 0.42
RNF13-208ENST00000467996 DHX29Q7Z478 1369 aaKnown RBP17.7■□□□□ 0.42
RNF13-208ENST00000467996 RNF17Q9BXT8 1623 aaKnown RBP17.69■□□□□ 0.42
RNF13-208ENST00000467996 MROH1Q8NDA8 1641 aa17.67■□□□□ 0.42
RNF13-208ENST00000467996 AGLP35573 1532 aa17.66■□□□□ 0.42
RNF13-208ENST00000467996 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
RNF13-208ENST00000467996 HRCP23327 699 aa17.65■□□□□ 0.42
RNF13-208ENST00000467996 PRDM15P57071 1507 aaPredicted RBP17.65■□□□□ 0.42
RNF13-208ENST00000467996 IQGAP3Q86VI3 1631 aa17.64■□□□□ 0.41
RNF13-208ENST00000467996 CEP152O94986 1710 aa17.61■□□□□ 0.41
RNF13-208ENST00000467996 VWDEQ8N2E2 1590 aa17.61■□□□□ 0.41
RNF13-208ENST00000467996 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
RNF13-208ENST00000467996 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
RNF13-208ENST00000467996 PZPP20742 1482 aa17.59■□□□□ 0.41
RNF13-208ENST00000467996 ACIN1Q9UKV3 1341 aaKnown RBP17.59■□□□□ 0.41
RNF13-208ENST00000467996 KIF3BO15066 747 aa17.59■□□□□ 0.41
RNF13-208ENST00000467996 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
RNF13-208ENST00000467996 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
RNF13-208ENST00000467996 TET3O43151 1660 aa17.56■□□□□ 0.4
RNF13-208ENST00000467996 NUP155O75694 1391 aa17.55■□□□□ 0.4
RNF13-208ENST00000467996 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
RNF13-208ENST00000467996 ABCC3O15438 1527 aa17.53■□□□□ 0.4
RNF13-208ENST00000467996 LMTK2Q8IWU2 1503 aa17.53■□□□□ 0.4
RNF13-208ENST00000467996 CLTCQ00610 1675 aaKnown RBP17.53■□□□□ 0.4
RNF13-208ENST00000467996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
RNF13-208ENST00000467996 KANK1Q14678 1352 aa17.53■□□□□ 0.4
RNF13-208ENST00000467996 E9PCH4 1651 aa17.52■□□□□ 0.4
RNF13-208ENST00000467996 FER1L4A9Z1Z3 1794 aa17.51■□□□□ 0.39
RNF13-208ENST00000467996 GGT6Q6P531 493 aa17.51■□□□□ 0.39
RNF13-208ENST00000467996 EFCAB6Q5THR3 1501 aa17.51■□□□□ 0.39
RNF13-208ENST00000467996 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
RNF13-208ENST00000467996 MPHOSPH9Q99550 1183 aa17.49■□□□□ 0.39
RNF13-208ENST00000467996 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
RNF13-208ENST00000467996 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
RNF13-208ENST00000467996 MROH2AA6NES4 1674 aa17.47■□□□□ 0.39
RNF13-208ENST00000467996 SPHKAPQ2M3C7 1700 aa17.47■□□□□ 0.39
RNF13-208ENST00000467996 MLECQ14165 292 aa17.45■□□□□ 0.38
RNF13-208ENST00000467996 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
RNF13-208ENST00000467996 ADAMTSL3P82987 1691 aa17.45■□□□□ 0.38
RNF13-208ENST00000467996 MADDQ8WXG6 1647 aa17.44■□□□□ 0.38
RNF13-208ENST00000467996 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
RNF13-208ENST00000467996 PKD2Q13563 968 aa17.42■□□□□ 0.38
RNF13-208ENST00000467996 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
RNF13-208ENST00000467996 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
RNF13-208ENST00000467996 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
RNF13-208ENST00000467996 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
RNF13-208ENST00000467996 NPATQ14207 1427 aa17.4■□□□□ 0.38
RNF13-208ENST00000467996 ARHGAP31Q2M1Z3 1444 aa17.4■□□□□ 0.38
RNF13-208ENST00000467996 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
RNF13-208ENST00000467996 C3P01024 1663 aa17.39■□□□□ 0.37
RNF13-208ENST00000467996 TRPM2O94759 1503 aa17.38■□□□□ 0.37
RNF13-208ENST00000467996 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
RNF13-208ENST00000467996 ANKRD30BQ9BXX2 1392 aa17.37■□□□□ 0.37
RNF13-208ENST00000467996 PLA2R1Q13018 1463 aa17.36■□□□□ 0.37
RNF13-208ENST00000467996 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
RNF13-208ENST00000467996 PTPRTO14522 1441 aa17.35■□□□□ 0.37
RNF13-208ENST00000467996 SYNMO15061 1565 aa17.35■□□□□ 0.37
RNF13-208ENST00000467996 CLTCL1P53675 1640 aa17.35■□□□□ 0.37
RNF13-208ENST00000467996 SPATA31D1Q6ZQQ2 1576 aa17.34■□□□□ 0.37
RNF13-208ENST00000467996 PIK3C2BO00750 1634 aa17.33■□□□□ 0.37
RNF13-208ENST00000467996 ERVK-7P63135 1459 aa17.33■□□□□ 0.37
RNF13-208ENST00000467996 NOS1P29475 1434 aa17.32■□□□□ 0.36
RNF13-208ENST00000467996 ZMYM3Q14202 1370 aa17.32■□□□□ 0.36
RNF13-208ENST00000467996 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
RNF13-208ENST00000467996 KIF1BO60333 1816 aa17.31■□□□□ 0.36
RNF13-208ENST00000467996 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
RNF13-208ENST00000467996 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
RNF13-208ENST00000467996 FBXO31Q5XUX0 539 aaPredicted RBP17.25■□□□□ 0.35
RNF13-208ENST00000467996 MYO5BQ9ULV0 1848 aa17.25■□□□□ 0.35
RNF13-208ENST00000467996 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
RNF13-208ENST00000467996 PTPRMP28827 1452 aa17.24■□□□□ 0.35
RNF13-208ENST00000467996 NEURL4Q96JN8 1562 aa17.23■□□□□ 0.35
RNF13-208ENST00000467996 ADGRB3O60242 1522 aa17.23■□□□□ 0.35
RNF13-208ENST00000467996 NEUROD1Q13562 356 aa17.23■□□□□ 0.35
RNF13-208ENST00000467996 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
RNF13-208ENST00000467996 TNRQ92752 1358 aa17.22■□□□□ 0.35
RNF13-208ENST00000467996 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.35
RNF13-208ENST00000467996 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
RNF13-208ENST00000467996 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
RNF13-208ENST00000467996 MSH5O43196 834 aa17.2■□□□□ 0.34
RNF13-208ENST00000467996 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
RNF13-208ENST00000467996 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
RNF13-208ENST00000467996 ZNF142P52746 1687 aaPredicted RBP17.19■□□□□ 0.34
RNF13-208ENST00000467996 TONSLQ96HA7 1378 aa17.18■□□□□ 0.34
RNF13-208ENST00000467996 NLRP1Q9C000 1473 aa17.18■□□□□ 0.34
RNF13-208ENST00000467996 KDM4FA0A1W2PPD8 638 aa17.17■□□□□ 0.34
RNF13-208ENST00000467996 SLC52A1Q9NWF4 448 aa17.17■□□□□ 0.34
RNF13-208ENST00000467996 PPLO60437 1756 aa17.17■□□□□ 0.34
RNF13-208ENST00000467996 IDI1Q13907 227 aa17.15■□□□□ 0.34
RNF13-208ENST00000467996 CEP170BQ9Y4F5 1589 aaPredicted RBP17.15■□□□□ 0.34
RNF13-208ENST00000467996 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
RNF13-208ENST00000467996 SETD1BQ9UPS6 1966 aaKnown RBP17.14■□□□□ 0.33
RNF13-208ENST00000467996 NEXMIFQ5QGS0 1516 aa17.12■□□□□ 0.33
RNF13-208ENST00000467996 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
RNF13-208ENST00000467996 A2ML1A8K2U0 1454 aa17.12■□□□□ 0.33
RNF13-208ENST00000467996 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
RNF13-208ENST00000467996 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
RNF13-208ENST00000467996 RGL3Q3MIN7 710 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms