RNA–Protein interactions for RNA: ENST00000467173.1

USP9X-206, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-206ENST00000467173 DPYSL4O14531 572 aa12.36□□□□□ -0.43
USP9X-206ENST00000467173 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
USP9X-206ENST00000467173 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
USP9X-206ENST00000467173 COL9A1P20849 921 aa12.34□□□□□ -0.43
USP9X-206ENST00000467173 IFFO2Q5TF58 517 aa12.34□□□□□ -0.43
USP9X-206ENST00000467173 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
USP9X-206ENST00000467173 LAPTM4BQ86VI4 370 aa12.33□□□□□ -0.44
USP9X-206ENST00000467173 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
USP9X-206ENST00000467173 ANKK1Q8NFD2 765 aa12.32□□□□□ -0.44
USP9X-206ENST00000467173 PROX2Q3B8N5 592 aa12.31□□□□□ -0.44
USP9X-206ENST00000467173 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
USP9X-206ENST00000467173 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
USP9X-206ENST00000467173 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
USP9X-206ENST00000467173 DDX12PQ92771 950 aa12.26□□□□□ -0.45
USP9X-206ENST00000467173 RGS20O76081 388 aa12.25□□□□□ -0.45
USP9X-206ENST00000467173 PDIA6Q15084 440 aa12.25□□□□□ -0.45
USP9X-206ENST00000467173 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
USP9X-206ENST00000467173 TRIM6-TRIM34B2RNG4 842 aa12.23□□□□□ -0.45
USP9X-206ENST00000467173 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
USP9X-206ENST00000467173 ZFRQ96KR1 1074 aaKnown RBP12.22□□□□□ -0.45
USP9X-206ENST00000467173 SOWAHBA6NEL2 793 aa12.21□□□□□ -0.45
USP9X-206ENST00000467173 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
USP9X-206ENST00000467173 NBR1Q14596 966 aa12.21□□□□□ -0.45
USP9X-206ENST00000467173 E2F4Q16254 413 aa12.21□□□□□ -0.45
USP9X-206ENST00000467173 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
USP9X-206ENST00000467173 MAP3K7O43318 606 aa12.19□□□□□ -0.46
USP9X-206ENST00000467173 BCAMP50895 628 aa12.19□□□□□ -0.46
USP9X-206ENST00000467173 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
USP9X-206ENST00000467173 A0A0G2JS52 829 aa12.18□□□□□ -0.46
USP9X-206ENST00000467173 PACS2Q86VP3 889 aa12.18□□□□□ -0.46
USP9X-206ENST00000467173 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
USP9X-206ENST00000467173 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
USP9X-206ENST00000467173 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
USP9X-206ENST00000467173 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
USP9X-206ENST00000467173 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
USP9X-206ENST00000467173 CERKQ8TCT0 537 aa12.14□□□□□ -0.47
USP9X-206ENST00000467173 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
USP9X-206ENST00000467173 TSR1Q2NL82 804 aaKnown RBP12.13□□□□□ -0.47
USP9X-206ENST00000467173 LRCH3Q96II8 777 aa12.13□□□□□ -0.47
USP9X-206ENST00000467173 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.13□□□□□ -0.47
USP9X-206ENST00000467173 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
USP9X-206ENST00000467173 TSR3Q9UJK0 312 aaKnown RBP12.11□□□□□ -0.47
USP9X-206ENST00000467173 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
USP9X-206ENST00000467173 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
USP9X-206ENST00000467173 PRSS12P56730 875 aa12.08□□□□□ -0.48
USP9X-206ENST00000467173 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
USP9X-206ENST00000467173 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
USP9X-206ENST00000467173 KCNC4Q03721 635 aa12.07□□□□□ -0.48
USP9X-206ENST00000467173 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
USP9X-206ENST00000467173 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
USP9X-206ENST00000467173 PPP4CP60510 307 aa12.02□□□□□ -0.49
USP9X-206ENST00000467173 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
USP9X-206ENST00000467173 OSBPP22059 807 aa12.01□□□□□ -0.49
USP9X-206ENST00000467173 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
USP9X-206ENST00000467173 TATDN2Q93075 761 aa12□□□□□ -0.49
USP9X-206ENST00000467173 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
USP9X-206ENST00000467173 SAMD7Q7Z3H4 446 aa11.98□□□□□ -0.49
USP9X-206ENST00000467173 PNMA3Q9UL41 463 aa11.98□□□□□ -0.49
USP9X-206ENST00000467173 SMAPO00193 183 aa11.97□□□□□ -0.49
USP9X-206ENST00000467173 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
USP9X-206ENST00000467173 NECTIN2Q92692 538 aa11.94□□□□□ -0.5
USP9X-206ENST00000467173 CDHR5Q9HBB8 845 aa11.94□□□□□ -0.5
USP9X-206ENST00000467173 NUDT18Q6ZVK8 323 aa11.92□□□□□ -0.5
USP9X-206ENST00000467173 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
USP9X-206ENST00000467173 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
USP9X-206ENST00000467173 C3orf80F5H4A9 247 aa11.89□□□□□ -0.51
USP9X-206ENST00000467173 TJAP1Q5JTD0 557 aa11.89□□□□□ -0.51
USP9X-206ENST00000467173 IL21Q9HBE4 155 aa11.88□□□□□ -0.51
USP9X-206ENST00000467173 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
USP9X-206ENST00000467173 NPDC1Q9NQX5 325 aaPredicted RBP11.87□□□□□ -0.51
USP9X-206ENST00000467173 RNF40O75150 1001 aa11.86□□□□□ -0.51
USP9X-206ENST00000467173 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
USP9X-206ENST00000467173 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
USP9X-206ENST00000467173 MTRQ99707 1265 aa11.85□□□□□ -0.51
USP9X-206ENST00000467173 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
USP9X-206ENST00000467173 LAPTM4AQ15012 233 aa11.81□□□□□ -0.52
USP9X-206ENST00000467173 SWT1Q5T5J6 900 aaKnown RBP11.81□□□□□ -0.52
USP9X-206ENST00000467173 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
USP9X-206ENST00000467173 APLP1P51693 650 aa11.8□□□□□ -0.52
USP9X-206ENST00000467173 EYA1Q99502 592 aa11.79□□□□□ -0.52
USP9X-206ENST00000467173 PRR14Q9BWN1 585 aa11.79□□□□□ -0.52
USP9X-206ENST00000467173 MLLT3P42568 568 aaPredicted RBP11.78□□□□□ -0.52
USP9X-206ENST00000467173 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
USP9X-206ENST00000467173 Q6ZNB5 142 aa11.77□□□□□ -0.53
USP9X-206ENST00000467173 PTGDRQ13258 359 aa11.75□□□□□ -0.53
USP9X-206ENST00000467173 PPP1R18Q6NYC8 613 aa11.75□□□□□ -0.53
USP9X-206ENST00000467173 GGCXP38435 758 aa11.74□□□□□ -0.53
USP9X-206ENST00000467173 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
USP9X-206ENST00000467173 ZNF516Q92618 1163 aa11.74□□□□□ -0.53
USP9X-206ENST00000467173 PRKD2Q9BZL6 878 aa11.74□□□□□ -0.53
USP9X-206ENST00000467173 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.73□□□□□ -0.53
USP9X-206ENST00000467173 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
USP9X-206ENST00000467173 DNAJB2P25686 324 aa11.72□□□□□ -0.53
USP9X-206ENST00000467173 NUTM2FA1L443 756 aa11.7□□□□□ -0.54
USP9X-206ENST00000467173 GFRA3O60609 400 aa11.7□□□□□ -0.54
USP9X-206ENST00000467173 COPS2P61201 443 aa11.7□□□□□ -0.54
USP9X-206ENST00000467173 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
USP9X-206ENST00000467173 PCDHB3Q9Y5E6 796 aa11.68□□□□□ -0.54
USP9X-206ENST00000467173 ADGRG1Q9Y653 693 aa11.68□□□□□ -0.54
USP9X-206ENST00000467173 ZPR1O75312 459 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms