RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 ZMYM3Q14202 1370 aa14.4□□□□□ -0.1
PKP4-208ENST00000462335 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
PKP4-208ENST00000462335 ERBINQ96RT1 1412 aa14.38□□□□□ -0.11
PKP4-208ENST00000462335 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
PKP4-208ENST00000462335 CLTCQ00610 1675 aaKnown RBP14.36□□□□□ -0.11
PKP4-208ENST00000462335 ROCK1Q13464 1354 aa14.35□□□□□ -0.11
PKP4-208ENST00000462335 ANKRD50Q9ULJ7 1429 aa14.35□□□□□ -0.11
PKP4-208ENST00000462335 EIF2AK4Q9P2K8 1649 aaKnown RBP14.35□□□□□ -0.11
PKP4-208ENST00000462335 SETD1BQ9UPS6 1966 aaKnown RBP14.34□□□□□ -0.11
PKP4-208ENST00000462335 ADGRL2O95490 1459 aa14.34□□□□□ -0.11
PKP4-208ENST00000462335 KDM5DQ9BY66 1539 aa14.33□□□□□ -0.12
PKP4-208ENST00000462335 UHRF1BP1Q6BDS2 1440 aa14.32□□□□□ -0.12
PKP4-208ENST00000462335 TRIM52Q96A61 297 aa14.32□□□□□ -0.12
PKP4-208ENST00000462335 MROH2AA6NES4 1674 aa14.32□□□□□ -0.12
PKP4-208ENST00000462335 C3P01024 1663 aa14.32□□□□□ -0.12
PKP4-208ENST00000462335 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
PKP4-208ENST00000462335 FAM135AQ9P2D6 1515 aa14.3□□□□□ -0.12
PKP4-208ENST00000462335 HSPA2P54652 639 aa14.29□□□□□ -0.12
PKP4-208ENST00000462335 FBXO31Q5XUX0 539 aaPredicted RBP14.29□□□□□ -0.12
PKP4-208ENST00000462335 STAG3Q9UJ98 1225 aa14.29□□□□□ -0.12
PKP4-208ENST00000462335 NPATQ14207 1427 aa14.29□□□□□ -0.12
PKP4-208ENST00000462335 RNF17Q9BXT8 1623 aaKnown RBP14.29□□□□□ -0.12
PKP4-208ENST00000462335 CFAP65Q6ZU64 1925 aaKnown RBP14.27□□□□□ -0.12
PKP4-208ENST00000462335 NUP155O75694 1391 aa14.27□□□□□ -0.12
PKP4-208ENST00000462335 TNRQ92752 1358 aa14.27□□□□□ -0.12
PKP4-208ENST00000462335 ZC3H13Q5T200 1668 aaKnown RBP14.26□□□□□ -0.13
PKP4-208ENST00000462335 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
PKP4-208ENST00000462335 ABCC3O15438 1527 aa14.25□□□□□ -0.13
PKP4-208ENST00000462335 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
PKP4-208ENST00000462335 PZPP20742 1482 aa14.25□□□□□ -0.13
PKP4-208ENST00000462335 CEP152O94986 1710 aa14.24□□□□□ -0.13
PKP4-208ENST00000462335 ACIN1Q9UKV3 1341 aaKnown RBP14.24□□□□□ -0.13
PKP4-208ENST00000462335 THEMISQ8N1K5 641 aaPredicted RBP14.24□□□□□ -0.13
PKP4-208ENST00000462335 PRDM15P57071 1507 aaPredicted RBP14.22□□□□□ -0.13
PKP4-208ENST00000462335 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
PKP4-208ENST00000462335 DEPDC5O75140 1603 aa14.21□□□□□ -0.13
PKP4-208ENST00000462335 CAMSAP1Q5T5Y3 1602 aa14.21□□□□□ -0.13
PKP4-208ENST00000462335 NAIPQ13075 1403 aa14.21□□□□□ -0.13
PKP4-208ENST00000462335 CHGAP10645 457 aaKnown RBP14.2□□□□□ -0.14
PKP4-208ENST00000462335 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
PKP4-208ENST00000462335 HFM1A2PYH4 1435 aa14.2□□□□□ -0.14
PKP4-208ENST00000462335 MROH1Q8NDA8 1641 aa14.19□□□□□ -0.14
PKP4-208ENST00000462335 ARHGAP31Q2M1Z3 1444 aa14.18□□□□□ -0.14
PKP4-208ENST00000462335 NLRP1Q9C000 1473 aa14.18□□□□□ -0.14
PKP4-208ENST00000462335 ANKLE2Q86XL3 938 aa14.17□□□□□ -0.14
PKP4-208ENST00000462335 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
PKP4-208ENST00000462335 EID1Q9Y6B2 187 aa14.17□□□□□ -0.14
PKP4-208ENST00000462335 ERVK-7P63135 1459 aa14.17□□□□□ -0.14
PKP4-208ENST00000462335 HDGFP51858 240 aaKnown RBP14.16□□□□□ -0.14
PKP4-208ENST00000462335 PKD2Q13563 968 aa14.16□□□□□ -0.14
PKP4-208ENST00000462335 BCANQ96GW7 911 aa14.16□□□□□ -0.14
PKP4-208ENST00000462335 A2ML1A8K2U0 1454 aa14.16□□□□□ -0.14
PKP4-208ENST00000462335 UNC13BO14795 1591 aa14.16□□□□□ -0.14
PKP4-208ENST00000462335 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
PKP4-208ENST00000462335 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
PKP4-208ENST00000462335 LMTK2Q8IWU2 1503 aa14.15□□□□□ -0.14
PKP4-208ENST00000462335 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
PKP4-208ENST00000462335 CEP170BQ9Y4F5 1589 aaPredicted RBP14.15□□□□□ -0.14
PKP4-208ENST00000462335 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.15
PKP4-208ENST00000462335 TET3O43151 1660 aa14.14□□□□□ -0.15
PKP4-208ENST00000462335 RPRD2Q5VT52 1461 aaKnown RBP14.14□□□□□ -0.15
PKP4-208ENST00000462335 EFCAB6Q5THR3 1501 aa14.14□□□□□ -0.15
PKP4-208ENST00000462335 VWDEQ8N2E2 1590 aa14.13□□□□□ -0.15
PKP4-208ENST00000462335 IDI1Q13907 227 aa14.13□□□□□ -0.15
PKP4-208ENST00000462335 SPATA31D1Q6ZQQ2 1576 aa14.13□□□□□ -0.15
PKP4-208ENST00000462335 UGGT1Q9NYU2 1555 aa14.13□□□□□ -0.15
PKP4-208ENST00000462335 IQGAP3Q86VI3 1631 aa14.12□□□□□ -0.15
PKP4-208ENST00000462335 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
PKP4-208ENST00000462335 TXNDC2Q86VQ3 553 aa14.11□□□□□ -0.15
PKP4-208ENST00000462335 MPHOSPH9Q99550 1183 aa14.11□□□□□ -0.15
PKP4-208ENST00000462335 TRIM26Q12899 539 aaPredicted RBP14.1□□□□□ -0.15
PKP4-208ENST00000462335 ZNF326Q5BKZ1 582 aaKnown RBP14.1□□□□□ -0.15
PKP4-208ENST00000462335 ZNF142P52746 1687 aaPredicted RBP14.09□□□□□ -0.15
PKP4-208ENST00000462335 RAB3GAP2Q9H2M9 1393 aa14.09□□□□□ -0.15
PKP4-208ENST00000462335 E9PCH4 1651 aa14.07□□□□□ -0.16
PKP4-208ENST00000462335 NOS1P29475 1434 aa14.07□□□□□ -0.16
PKP4-208ENST00000462335 PLA2R1Q13018 1463 aa14.06□□□□□ -0.16
PKP4-208ENST00000462335 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.06□□□□□ -0.16
PKP4-208ENST00000462335 HRCP23327 699 aa14.05□□□□□ -0.16
PKP4-208ENST00000462335 FOXD1Q16676 465 aa14.05□□□□□ -0.16
PKP4-208ENST00000462335 PTPRTO14522 1441 aa14.05□□□□□ -0.16
PKP4-208ENST00000462335 PIK3C2BO00750 1634 aa14.04□□□□□ -0.16
PKP4-208ENST00000462335 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
PKP4-208ENST00000462335 STRCQ7RTU9 1775 aa14.03□□□□□ -0.16
PKP4-208ENST00000462335 UBR1Q8IWV7 1749 aa14.02□□□□□ -0.16
PKP4-208ENST00000462335 SYNMO15061 1565 aa14.02□□□□□ -0.16
PKP4-208ENST00000462335 TMEM2Q9UHN6 1383 aa14.02□□□□□ -0.17
PKP4-208ENST00000462335 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
PKP4-208ENST00000462335 SCAF11Q99590 1463 aaKnown RBP14□□□□□ -0.17
PKP4-208ENST00000462335 NPHP4O75161 1426 aaPredicted RBP14□□□□□ -0.17
PKP4-208ENST00000462335 LTKP29376 864 aa14□□□□□ -0.17
PKP4-208ENST00000462335 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
PKP4-208ENST00000462335 POLR1AO95602 1720 aaPredicted RBP14□□□□□ -0.17
PKP4-208ENST00000462335 ADGRB3O60242 1522 aa14□□□□□ -0.17
PKP4-208ENST00000462335 CCDC144AA2RUR9 1427 aa13.98□□□□□ -0.17
PKP4-208ENST00000462335 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
PKP4-208ENST00000462335 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
PKP4-208ENST00000462335 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
PKP4-208ENST00000462335 KIF1BO60333 1816 aa13.97□□□□□ -0.17
PKP4-208ENST00000462335 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms