RNA–Protein interactions for RNA: ENST00000461661.1

ITCH-203, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene ITCH, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-203ENST00000461661 KCNH8Q96L42 1107 aa7.48□□□□□ -1.21
ITCH-203ENST00000461661 SLC4A5Q9BY07 1137 aa7.47□□□□□ -1.21
ITCH-203ENST00000461661 MYT1LQ9UL68 1186 aa7.47□□□□□ -1.21
ITCH-203ENST00000461661 VPS9D1Q9Y2B5 631 aa7.47□□□□□ -1.21
ITCH-203ENST00000461661 COL9A1P20849 921 aa7.46□□□□□ -1.22
ITCH-203ENST00000461661 PRIM1P49642 420 aaKnown RBP7.46□□□□□ -1.22
ITCH-203ENST00000461661 NBR1Q14596 966 aa7.46□□□□□ -1.22
ITCH-203ENST00000461661 C6orf132Q5T0Z8 1188 aa7.46□□□□□ -1.22
ITCH-203ENST00000461661 RBM33Q96EV2 1170 aaKnown RBP7.46□□□□□ -1.22
ITCH-203ENST00000461661 ZBED2Q9BTP6 218 aa7.46□□□□□ -1.22
ITCH-203ENST00000461661 GRXCR2A6NFK2 248 aa7.45□□□□□ -1.22
ITCH-203ENST00000461661 EN1Q05925 392 aaPredicted RBP7.45□□□□□ -1.22
ITCH-203ENST00000461661 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
ITCH-203ENST00000461661 OSBPP22059 807 aa7.44□□□□□ -1.22
ITCH-203ENST00000461661 P3H3Q8IVL6 736 aa7.44□□□□□ -1.22
ITCH-203ENST00000461661 RNF166Q96A37 237 aaPredicted RBP7.44□□□□□ -1.22
ITCH-203ENST00000461661 BHMG1C9JSJ3 638 aaPredicted RBP7.43□□□□□ -1.22
ITCH-203ENST00000461661 TSR1Q2NL82 804 aaKnown RBP7.43□□□□□ -1.22
ITCH-203ENST00000461661 MLLT3P42568 568 aaPredicted RBP7.42□□□□□ -1.22
ITCH-203ENST00000461661 MAP3K7O43318 606 aa7.41□□□□□ -1.22
ITCH-203ENST00000461661 PROX2Q3B8N5 592 aa7.41□□□□□ -1.22
ITCH-203ENST00000461661 VSIG10Q8N0Z9 540 aa7.41□□□□□ -1.22
ITCH-203ENST00000461661 SEMA3EO15041 775 aa7.39□□□□□ -1.23
ITCH-203ENST00000461661 RABGEF1Q9UJ41 708 aa7.38□□□□□ -1.23
ITCH-203ENST00000461661 STAC3Q96MF2 364 aa7.37□□□□□ -1.23
ITCH-203ENST00000461661 CDHR5Q9HBB8 845 aa7.37□□□□□ -1.23
ITCH-203ENST00000461661 TRIM6-TRIM34B2RNG4 842 aa7.36□□□□□ -1.23
ITCH-203ENST00000461661 ONECUT3O60422 494 aaPredicted RBP7.36□□□□□ -1.23
ITCH-203ENST00000461661 KIAA1468Q9P260 1216 aa7.36□□□□□ -1.23
ITCH-203ENST00000461661 NPDC1Q9NQX5 325 aaPredicted RBP7.35□□□□□ -1.23
ITCH-203ENST00000461661 TSKSQ9UJT2 592 aa7.35□□□□□ -1.23
ITCH-203ENST00000461661 PRSS12P56730 875 aa7.34□□□□□ -1.23
ITCH-203ENST00000461661 MRPL50Q8N5N7 158 aaKnown RBP7.34□□□□□ -1.23
ITCH-203ENST00000461661 CERKQ8TCT0 537 aa7.34□□□□□ -1.23
ITCH-203ENST00000461661 KCTD12Q96CX2 325 aaKnown RBP7.34□□□□□ -1.23
ITCH-203ENST00000461661 NBPF3Q9H094 633 aa7.34□□□□□ -1.23
ITCH-203ENST00000461661 TESPA1A2RU30 521 aaPredicted RBP7.33□□□□□ -1.24
ITCH-203ENST00000461661 CDCA7LQ96GN5 454 aa7.33□□□□□ -1.24
ITCH-203ENST00000461661 FAM198AQ9UFP1 575 aa7.33□□□□□ -1.24
ITCH-203ENST00000461661 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
ITCH-203ENST00000461661 LAPTM4BQ86VI4 370 aa7.31□□□□□ -1.24
ITCH-203ENST00000461661 PACS2Q86VP3 889 aa7.3□□□□□ -1.24
ITCH-203ENST00000461661 HCSTQ9UBK5 93 aa7.3□□□□□ -1.24
ITCH-203ENST00000461661 SEPT9Q9UHD8 586 aaPredicted RBP7.3□□□□□ -1.24
ITCH-203ENST00000461661 GOLGA8CPA6NN73 597 aa7.29□□□□□ -1.24
ITCH-203ENST00000461661 PTGDRQ13258 359 aa7.29□□□□□ -1.24
ITCH-203ENST00000461661 THSD4Q6ZMP0 1018 aa7.29□□□□□ -1.24
ITCH-203ENST00000461661 TTC13Q8NBP0 860 aa7.29□□□□□ -1.24
ITCH-203ENST00000461661 WNT2BQ93097 391 aa7.29□□□□□ -1.24
ITCH-203ENST00000461661 RBM27Q9P2N5 1060 aaKnown RBP7.29□□□□□ -1.24
ITCH-203ENST00000461661 RBM26Q5T8P6 1007 aaKnown RBP7.28□□□□□ -1.24
ITCH-203ENST00000461661 ZFRQ96KR1 1074 aaKnown RBP7.28□□□□□ -1.24
ITCH-203ENST00000461661 FAM98CQ17RN3 349 aaKnown RBP7.27□□□□□ -1.25
ITCH-203ENST00000461661 PADI6Q6TGC4 694 aa7.27□□□□□ -1.25
ITCH-203ENST00000461661 NUTM2FA1L443 756 aa7.26□□□□□ -1.25
ITCH-203ENST00000461661 SMAPO00193 183 aa7.26□□□□□ -1.25
ITCH-203ENST00000461661 PTPN5P54829 565 aa7.26□□□□□ -1.25
ITCH-203ENST00000461661 SMYD5Q6GMV2 418 aa7.26□□□□□ -1.25
ITCH-203ENST00000461661 TATDN2Q93075 761 aa7.26□□□□□ -1.25
ITCH-203ENST00000461661 NUDT18Q6ZVK8 323 aa7.25□□□□□ -1.25
ITCH-203ENST00000461661 ANKK1Q8NFD2 765 aa7.25□□□□□ -1.25
ITCH-203ENST00000461661 PNMA3Q9UL41 463 aa7.25□□□□□ -1.25
ITCH-203ENST00000461661 SOWAHBA6NEL2 793 aa7.24□□□□□ -1.25
ITCH-203ENST00000461661 BCAMP50895 628 aa7.24□□□□□ -1.25
ITCH-203ENST00000461661 NBPF26B4DH59 902 aa7.23□□□□□ -1.25
ITCH-203ENST00000461661 FCHSD2O94868 740 aa7.22□□□□□ -1.25
ITCH-203ENST00000461661 EYA1Q99502 592 aa7.22□□□□□ -1.25
ITCH-203ENST00000461661 GPR37O15354 613 aa7.21□□□□□ -1.26
ITCH-203ENST00000461661 SAMD7Q7Z3H4 446 aa7.2□□□□□ -1.26
ITCH-203ENST00000461661 LRCH3Q96II8 777 aa7.2□□□□□ -1.26
ITCH-203ENST00000461661 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.2□□□□□ -1.26
ITCH-203ENST00000461661 ADGRG1Q9Y653 693 aa7.2□□□□□ -1.26
ITCH-203ENST00000461661 HIC1Q14526 733 aa7.19□□□□□ -1.26
ITCH-203ENST00000461661 FAM161AQ3B820 660 aa7.19□□□□□ -1.26
ITCH-203ENST00000461661 WBP1LQ9NX94 342 aa7.19□□□□□ -1.26
ITCH-203ENST00000461661 FECHP22830 423 aa7.18□□□□□ -1.26
ITCH-203ENST00000461661 PLA2G2EQ9NZK7 142 aa7.18□□□□□ -1.26
ITCH-203ENST00000461661 TSR3Q9UJK0 312 aaKnown RBP7.18□□□□□ -1.26
ITCH-203ENST00000461661 HPS5Q9UPZ3 1129 aa7.17□□□□□ -1.26
ITCH-203ENST00000461661 GNPATO15228 680 aa7.16□□□□□ -1.26
ITCH-203ENST00000461661 SWT1Q5T5J6 900 aaKnown RBP7.15□□□□□ -1.26
ITCH-203ENST00000461661 NYAP1Q6ZVC0 841 aa7.15□□□□□ -1.26
ITCH-203ENST00000461661 GPIHBP1Q8IV16 184 aa7.15□□□□□ -1.26
ITCH-203ENST00000461661 RBM46Q8TBY0 533 aaKnown RBP7.15□□□□□ -1.26
ITCH-203ENST00000461661 HDGFP51858 240 aaKnown RBP7.14□□□□□ -1.27
ITCH-203ENST00000461661 PPP4CP60510 307 aa7.14□□□□□ -1.27
ITCH-203ENST00000461661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.14□□□□□ -1.27
ITCH-203ENST00000461661 RCCD1A6NED2 376 aa7.13□□□□□ -1.27
ITCH-203ENST00000461661 TULP1O00294 542 aaPredicted RBP7.13□□□□□ -1.27
ITCH-203ENST00000461661 DNAJB2P25686 324 aa7.13□□□□□ -1.27
ITCH-203ENST00000461661 PXYLP1Q8TE99 480 aa7.13□□□□□ -1.27
ITCH-203ENST00000461661 OATP04181 439 aa7.12□□□□□ -1.27
ITCH-203ENST00000461661 METTL3Q86U44 580 aaKnown RBP7.12□□□□□ -1.27
ITCH-203ENST00000461661 TMEM134Q9H6X4 195 aa7.12□□□□□ -1.27
ITCH-203ENST00000461661 RNF40O75150 1001 aa7.11□□□□□ -1.27
ITCH-203ENST00000461661 ITGBL1O95965 494 aaPredicted RBP7.11□□□□□ -1.27
ITCH-203ENST00000461661 IFFO2Q5TF58 517 aa7.11□□□□□ -1.27
ITCH-203ENST00000461661 SLF2Q8IX21 1173 aa7.1□□□□□ -1.27
ITCH-203ENST00000461661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.09□□□□□ -1.27
ITCH-203ENST00000461661 APLP1P51693 650 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms