RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 DENND4BO75064 1496 aaPredicted RBP9.7□□□□□ -0.86
MSH2-204ENST00000461394 UNC13BO14795 1591 aa9.7□□□□□ -0.86
MSH2-204ENST00000461394 SCAPERQ9BY12 1400 aa9.69□□□□□ -0.86
MSH2-204ENST00000461394 KDM5DQ9BY66 1539 aa9.69□□□□□ -0.86
MSH2-204ENST00000461394 ATP7AQ04656 1500 aa9.68□□□□□ -0.86
MSH2-204ENST00000461394 AFAP1Q8N556 730 aa9.68□□□□□ -0.86
MSH2-204ENST00000461394 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
MSH2-204ENST00000461394 FAM135AQ9P2D6 1515 aa9.67□□□□□ -0.86
MSH2-204ENST00000461394 ERBINQ96RT1 1412 aa9.67□□□□□ -0.86
MSH2-204ENST00000461394 ANKRD30BQ9BXX2 1392 aa9.67□□□□□ -0.86
MSH2-204ENST00000461394 INO80Q9ULG1 1556 aaPredicted RBP9.67□□□□□ -0.86
MSH2-204ENST00000461394 RTEL1-TNFRSF6BF6WH68 1400 aa9.66□□□□□ -0.86
MSH2-204ENST00000461394 IQGAP3Q86VI3 1631 aa9.66□□□□□ -0.86
MSH2-204ENST00000461394 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
MSH2-204ENST00000461394 RPRD2Q5VT52 1461 aaKnown RBP9.66□□□□□ -0.86
MSH2-204ENST00000461394 MAP3K4Q9Y6R4 1608 aa9.64□□□□□ -0.87
MSH2-204ENST00000461394 L3MBTL2Q969R5 705 aa9.64□□□□□ -0.87
MSH2-204ENST00000461394 ZNF518AQ6AHZ1 1483 aa9.64□□□□□ -0.87
MSH2-204ENST00000461394 KIDINS220Q9ULH0 1771 aa9.63□□□□□ -0.87
MSH2-204ENST00000461394 HECW2Q9P2P5 1572 aa9.63□□□□□ -0.87
MSH2-204ENST00000461394 KANK1Q14678 1352 aa9.63□□□□□ -0.87
MSH2-204ENST00000461394 ZNF326Q5BKZ1 582 aaKnown RBP9.62□□□□□ -0.87
MSH2-204ENST00000461394 EIF2AK4Q9P2K8 1649 aaKnown RBP9.62□□□□□ -0.87
MSH2-204ENST00000461394 NEO1Q92859 1461 aa9.61□□□□□ -0.87
MSH2-204ENST00000461394 PLCB2Q00722 1185 aa9.61□□□□□ -0.87
MSH2-204ENST00000461394 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
MSH2-204ENST00000461394 POGZQ7Z3K3 1410 aa9.61□□□□□ -0.87
MSH2-204ENST00000461394 GLI2P10070 1586 aa9.61□□□□□ -0.87
MSH2-204ENST00000461394 TEX14Q8IWB6 1497 aa9.6□□□□□ -0.87
MSH2-204ENST00000461394 DIP2BQ9P265 1576 aa9.6□□□□□ -0.87
MSH2-204ENST00000461394 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
MSH2-204ENST00000461394 KIF3BO15066 747 aa9.6□□□□□ -0.87
MSH2-204ENST00000461394 FAM69CQ0P6D2 419 aa9.6□□□□□ -0.87
MSH2-204ENST00000461394 DEPDC5O75140 1603 aa9.6□□□□□ -0.87
MSH2-204ENST00000461394 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
MSH2-204ENST00000461394 TET3O43151 1660 aa9.59□□□□□ -0.87
MSH2-204ENST00000461394 DMRT2Q9Y5R5 561 aa9.59□□□□□ -0.87
MSH2-204ENST00000461394 KDM5CP41229 1560 aa9.58□□□□□ -0.88
MSH2-204ENST00000461394 E9PCH4 1651 aa9.58□□□□□ -0.88
MSH2-204ENST00000461394 KDM2AQ9Y2K7 1162 aa9.58□□□□□ -0.88
MSH2-204ENST00000461394 CEP152O94986 1710 aa9.58□□□□□ -0.88
MSH2-204ENST00000461394 SPHKAPQ2M3C7 1700 aa9.58□□□□□ -0.88
MSH2-204ENST00000461394 DHX29Q7Z478 1369 aaKnown RBP9.58□□□□□ -0.88
MSH2-204ENST00000461394 A2MP01023 1474 aa9.58□□□□□ -0.88
MSH2-204ENST00000461394 ABCA6Q8N139 1617 aa9.57□□□□□ -0.88
MSH2-204ENST00000461394 RICTORQ6R327 1708 aa9.57□□□□□ -0.88
MSH2-204ENST00000461394 EIF4G2P78344 907 aaKnown RBP eCLIP9.57□□□□□ -0.88
MSH2-204ENST00000461394 MIER1Q8N108 512 aa9.57□□□□□ -0.88
MSH2-204ENST00000461394 RAPGEF3O95398 923 aa9.56□□□□□ -0.88
MSH2-204ENST00000461394 MLH3Q9UHC1 1453 aa9.55□□□□□ -0.88
MSH2-204ENST00000461394 KIF13AQ9H1H9 1805 aa9.55□□□□□ -0.88
MSH2-204ENST00000461394 HSPA5P11021 654 aaKnown RBP9.55□□□□□ -0.88
MSH2-204ENST00000461394 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
MSH2-204ENST00000461394 NBPF8Q3BBV2 869 aa9.55□□□□□ -0.88
MSH2-204ENST00000461394 DCAF11Q8TEB1 546 aa9.55□□□□□ -0.88
MSH2-204ENST00000461394 PRDM15P57071 1507 aaPredicted RBP9.55□□□□□ -0.88
MSH2-204ENST00000461394 RNF17Q9BXT8 1623 aaKnown RBP9.54□□□□□ -0.88
MSH2-204ENST00000461394 RGL3Q3MIN7 710 aa9.54□□□□□ -0.88
MSH2-204ENST00000461394 PPRC1Q5VV67 1664 aaKnown RBP9.54□□□□□ -0.88
MSH2-204ENST00000461394 GGT6Q6P531 493 aa9.53□□□□□ -0.88
MSH2-204ENST00000461394 YTHDC1Q96MU7 727 aaKnown RBP9.53□□□□□ -0.88
MSH2-204ENST00000461394 DIP2CQ9Y2E4 1556 aa9.53□□□□□ -0.88
MSH2-204ENST00000461394 MROH1Q8NDA8 1641 aa9.53□□□□□ -0.88
MSH2-204ENST00000461394 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.88
MSH2-204ENST00000461394 TRPM2O94759 1503 aa9.52□□□□□ -0.88
MSH2-204ENST00000461394 KIF1BO60333 1816 aa9.52□□□□□ -0.89
MSH2-204ENST00000461394 BCANQ96GW7 911 aa9.52□□□□□ -0.89
MSH2-204ENST00000461394 POLR1AO95602 1720 aaPredicted RBP9.51□□□□□ -0.89
MSH2-204ENST00000461394 FRMPD1Q5SYB0 1578 aa9.51□□□□□ -0.89
MSH2-204ENST00000461394 VWDEQ8N2E2 1590 aa9.51□□□□□ -0.89
MSH2-204ENST00000461394 CLTCL1P53675 1640 aa9.51□□□□□ -0.89
MSH2-204ENST00000461394 ATP10AO60312 1499 aa9.51□□□□□ -0.89
MSH2-204ENST00000461394 PLA2R1Q13018 1463 aa9.51□□□□□ -0.89
MSH2-204ENST00000461394 EFCAB6Q5THR3 1501 aa9.51□□□□□ -0.89
MSH2-204ENST00000461394 BCORL1Q5H9F3 1711 aa9.51□□□□□ -0.89
MSH2-204ENST00000461394 CENPBP07199 599 aaPredicted RBP9.5□□□□□ -0.89
MSH2-204ENST00000461394 RALGAPBQ86X10 1494 aa9.5□□□□□ -0.89
MSH2-204ENST00000461394 CAMSAP1Q5T5Y3 1602 aa9.49□□□□□ -0.89
MSH2-204ENST00000461394 TRPM1Q7Z4N2 1603 aa9.49□□□□□ -0.89
MSH2-204ENST00000461394 UHRF1BP1Q6BDS2 1440 aa9.49□□□□□ -0.89
MSH2-204ENST00000461394 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
MSH2-204ENST00000461394 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
MSH2-204ENST00000461394 CARD11Q9BXL7 1154 aa9.49□□□□□ -0.89
MSH2-204ENST00000461394 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
MSH2-204ENST00000461394 WASHC2CQ9Y4E1 1318 aa9.49□□□□□ -0.89
MSH2-204ENST00000461394 ROCK2O75116 1388 aaKnown RBP9.49□□□□□ -0.89
MSH2-204ENST00000461394 ZC3H13Q5T200 1668 aaKnown RBP9.48□□□□□ -0.89
MSH2-204ENST00000461394 ZMYM4Q5VZL5 1548 aa9.48□□□□□ -0.89
MSH2-204ENST00000461394 ANP32CO43423 234 aa9.48□□□□□ -0.89
MSH2-204ENST00000461394 USP47Q96K76 1375 aa9.48□□□□□ -0.89
MSH2-204ENST00000461394 YEATS2Q9ULM3 1422 aa9.48□□□□□ -0.89
MSH2-204ENST00000461394 LMTK2Q8IWU2 1503 aa9.47□□□□□ -0.89
MSH2-204ENST00000461394 CHGAP10645 457 aaKnown RBP9.47□□□□□ -0.89
MSH2-204ENST00000461394 ABCC3O15438 1527 aa9.46□□□□□ -0.89
MSH2-204ENST00000461394 PTPRTO14522 1441 aa9.46□□□□□ -0.9
MSH2-204ENST00000461394 PRAG1Q86YV5 1406 aa9.46□□□□□ -0.9
MSH2-204ENST00000461394 MROH2AA6NES4 1674 aa9.45□□□□□ -0.9
MSH2-204ENST00000461394 UGGT1Q9NYU2 1555 aa9.45□□□□□ -0.9
MSH2-204ENST00000461394 WASHC2AQ641Q2 1341 aa9.44□□□□□ -0.9
MSH2-204ENST00000461394 CCDC7Q96M83 1385 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms