RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
NCL-207ENST00000461347 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
NCL-207ENST00000461347 DAPK1P53355 1430 aa18.63■□□□□ 0.57
NCL-207ENST00000461347 SPRYD3Q8NCJ5 442 aa18.62■□□□□ 0.57
NCL-207ENST00000461347 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
NCL-207ENST00000461347 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
NCL-207ENST00000461347 EPRSP07814 1512 aaKnown RBP18.61■□□□□ 0.57
NCL-207ENST00000461347 LRRIQ1Q96JM4 1722 aa18.6■□□□□ 0.57
NCL-207ENST00000461347 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
NCL-207ENST00000461347 NBPF1Q3BBV0 1214 aa18.59■□□□□ 0.57
NCL-207ENST00000461347 CENPQQ7L2Z9 268 aaPredicted RBP18.59■□□□□ 0.57
NCL-207ENST00000461347 FAM161AQ3B820 660 aa18.58■□□□□ 0.57
NCL-207ENST00000461347 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
NCL-207ENST00000461347 CFAP43Q8NDM7 1665 aa18.57■□□□□ 0.56
NCL-207ENST00000461347 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
NCL-207ENST00000461347 GSE1Q14687 1217 aa18.56■□□□□ 0.56
NCL-207ENST00000461347 SKAP1Q86WV1 359 aa18.56■□□□□ 0.56
NCL-207ENST00000461347 ANP32BQ92688 251 aaKnown RBP18.56■□□□□ 0.56
NCL-207ENST00000461347 BACH2Q9BYV9 841 aa18.56■□□□□ 0.56
NCL-207ENST00000461347 APAF1O14727 1248 aa18.56■□□□□ 0.56
NCL-207ENST00000461347 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
NCL-207ENST00000461347 ADAMTS8Q9UP79 889 aa18.56■□□□□ 0.56
NCL-207ENST00000461347 RPRD2Q5VT52 1461 aaKnown RBP18.55■□□□□ 0.56
NCL-207ENST00000461347 MAGI1Q96QZ7 1491 aaPredicted RBP18.55■□□□□ 0.56
NCL-207ENST00000461347 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
NCL-207ENST00000461347 U2SURPO15042 1029 aaKnown RBP18.54■□□□□ 0.56
NCL-207ENST00000461347 HECW1Q76N89 1606 aa18.54■□□□□ 0.56
NCL-207ENST00000461347 ABCC5O15440 1437 aa18.53■□□□□ 0.56
NCL-207ENST00000461347 RSPH4AQ5TD94 716 aa18.53■□□□□ 0.56
NCL-207ENST00000461347 ROCK1Q13464 1354 aa18.52■□□□□ 0.56
NCL-207ENST00000461347 STAG3Q9UJ98 1225 aa18.51■□□□□ 0.55
NCL-207ENST00000461347 SLC24A1O60721 1099 aa18.51■□□□□ 0.55
NCL-207ENST00000461347 NFKBIBQ15653 356 aa18.51■□□□□ 0.55
NCL-207ENST00000461347 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
NCL-207ENST00000461347 UGGT2Q9NYU1 1516 aa18.5■□□□□ 0.55
NCL-207ENST00000461347 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
NCL-207ENST00000461347 BCL2L13Q9BXK5 485 aa18.5■□□□□ 0.55
NCL-207ENST00000461347 GZF1Q9H116 711 aaPredicted RBP18.49■□□□□ 0.55
NCL-207ENST00000461347 COG6Q9Y2V7 657 aa18.49■□□□□ 0.55
NCL-207ENST00000461347 CEP170Q5SW79 1584 aa18.49■□□□□ 0.55
NCL-207ENST00000461347 MAPK8IP3Q9UPT6 1336 aa18.49■□□□□ 0.55
NCL-207ENST00000461347 SAFB2Q14151 953 aaKnown RBP eCLIP18.48■□□□□ 0.55
NCL-207ENST00000461347 EFCAB2Q5VUJ9 269 aa18.48■□□□□ 0.55
NCL-207ENST00000461347 TROQ12816 1431 aaPredicted RBP18.47■□□□□ 0.55
NCL-207ENST00000461347 TRIM44Q96DX7 344 aaPredicted RBP18.47■□□□□ 0.55
NCL-207ENST00000461347 SNAPC4Q5SXM2 1469 aa18.47■□□□□ 0.55
NCL-207ENST00000461347 IQGAP2Q13576 1575 aa18.47■□□□□ 0.55
NCL-207ENST00000461347 NPM1P06748 294 aaKnown RBP eCLIP18.47■□□□□ 0.551e-8■■■□□ 18.9
NCL-207ENST00000461347 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
NCL-207ENST00000461347 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.554e-16■■□□□ 12.1
NCL-207ENST00000461347 NAP1L5Q96NT1 182 aaPredicted RBP18.45■□□□□ 0.54
NCL-207ENST00000461347 SHROOM2Q13796 1616 aa18.44■□□□□ 0.54
NCL-207ENST00000461347 GRIN2AQ12879 1464 aa18.44■□□□□ 0.54
NCL-207ENST00000461347 KIF3BO15066 747 aa18.44■□□□□ 0.54
NCL-207ENST00000461347 MYH16Q9H6N6 1097 aa18.44■□□□□ 0.54
NCL-207ENST00000461347 KANK1Q14678 1352 aa18.43■□□□□ 0.54
NCL-207ENST00000461347 C9orf84Q5VXU9 1444 aa18.43■□□□□ 0.54
NCL-207ENST00000461347 CHD1O14646 1710 aa18.43■□□□□ 0.54
NCL-207ENST00000461347 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
NCL-207ENST00000461347 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
NCL-207ENST00000461347 E9PSI1 815 aa18.42■□□□□ 0.54
NCL-207ENST00000461347 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
NCL-207ENST00000461347 NUP160Q12769 1436 aa18.42■□□□□ 0.54
NCL-207ENST00000461347 GLIPR1L2Q4G1C9 344 aa18.42■□□□□ 0.54
NCL-207ENST00000461347 L1TD1Q5T7N2 865 aaKnown RBP18.42■□□□□ 0.54
NCL-207ENST00000461347 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
NCL-207ENST00000461347 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
NCL-207ENST00000461347 PMFBP1Q8TBY8 1022 aa18.41■□□□□ 0.54
NCL-207ENST00000461347 HSCBQ8IWL3 235 aa18.41■□□□□ 0.54
NCL-207ENST00000461347 PTPRGP23470 1445 aa18.41■□□□□ 0.54
NCL-207ENST00000461347 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
NCL-207ENST00000461347 SPAG9O60271 1321 aaKnown RBP18.4■□□□□ 0.54
NCL-207ENST00000461347 HSP90AB1P08238 724 aaKnown RBP18.4■□□□□ 0.54
NCL-207ENST00000461347 CGNL1Q0VF96 1302 aa18.39■□□□□ 0.53
NCL-207ENST00000461347 EIF3AQ14152 1382 aaKnown RBP18.39■□□□□ 0.53
NCL-207ENST00000461347 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
NCL-207ENST00000461347 FRAT2O75474 233 aaPredicted RBP18.38■□□□□ 0.53
NCL-207ENST00000461347 ITPRIPQ8IWB1 547 aa18.38■□□□□ 0.53
NCL-207ENST00000461347 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
NCL-207ENST00000461347 PANK1Q8TE04 598 aa18.38■□□□□ 0.53
NCL-207ENST00000461347 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
NCL-207ENST00000461347 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
NCL-207ENST00000461347 GGT6Q6P531 493 aa18.37■□□□□ 0.53
NCL-207ENST00000461347 WASHC2CQ9Y4E1 1318 aa18.37■□□□□ 0.53
NCL-207ENST00000461347 CAMSAP2Q08AD1 1489 aa18.36■□□□□ 0.53
NCL-207ENST00000461347 SRPK2P78362 688 aaKnown RBP18.36■□□□□ 0.53
NCL-207ENST00000461347 SMC4Q9NTJ3 1288 aa18.36■□□□□ 0.53
NCL-207ENST00000461347 BCAR3O75815 825 aa18.36■□□□□ 0.53
NCL-207ENST00000461347 KIAA0586Q9BVV6 1533 aa18.35■□□□□ 0.53
NCL-207ENST00000461347 DISP1Q96F81 1524 aa18.35■□□□□ 0.53
NCL-207ENST00000461347 STK26Q9P289 416 aa18.34■□□□□ 0.53
NCL-207ENST00000461347 POGKQ9P215 609 aa18.34■□□□□ 0.53
NCL-207ENST00000461347 DHX29Q7Z478 1369 aaKnown RBP18.34■□□□□ 0.53
NCL-207ENST00000461347 NUTM2DQ5VT03 806 aaPredicted RBP18.32■□□□□ 0.52
NCL-207ENST00000461347 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
NCL-207ENST00000461347 GOLGA6L3A6NEY3 463 aa18.31■□□□□ 0.52
NCL-207ENST00000461347 TCOF1Q13428 1488 aaKnown RBP18.3■□□□□ 0.52
NCL-207ENST00000461347 ERBINQ96RT1 1412 aa18.29■□□□□ 0.52
NCL-207ENST00000461347 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
NCL-207ENST00000461347 PNNQ9H307 717 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms