RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 DHX29Q7Z478 1369 aaKnown RBP24.56■■□□□ 1.52
NELFCD-201ENST00000460601 ACIN1Q9UKV3 1341 aaKnown RBP24.56■■□□□ 1.52
NELFCD-201ENST00000460601 PKD2Q13563 968 aa24.55■■□□□ 1.52
NELFCD-201ENST00000460601 FAM135AQ9P2D6 1515 aa24.55■■□□□ 1.52
NELFCD-201ENST00000460601 KIF3BO15066 747 aa24.53■■□□□ 1.52
NELFCD-201ENST00000460601 A2MP01023 1474 aa24.53■■□□□ 1.52
NELFCD-201ENST00000460601 MAGI2Q86UL8 1455 aa24.52■■□□□ 1.52
NELFCD-201ENST00000460601 DIP2CQ9Y2E4 1556 aa24.51■■□□□ 1.51
NELFCD-201ENST00000460601 ANKRD30BQ9BXX2 1392 aa24.5■■□□□ 1.51
NELFCD-201ENST00000460601 ZMYM4Q5VZL5 1548 aa24.49■■□□□ 1.51
NELFCD-201ENST00000460601 IQGAP3Q86VI3 1631 aa24.48■■□□□ 1.51
NELFCD-201ENST00000460601 DEPDC5O75140 1603 aa24.47■■□□□ 1.51
NELFCD-201ENST00000460601 EIF2AK4Q9P2K8 1649 aaKnown RBP24.47■■□□□ 1.51
NELFCD-201ENST00000460601 MROH1Q8NDA8 1641 aa24.45■■□□□ 1.5
NELFCD-201ENST00000460601 PRDM15P57071 1507 aaPredicted RBP24.41■■□□□ 1.5
NELFCD-201ENST00000460601 GGT6Q6P531 493 aa24.4■■□□□ 1.5
NELFCD-201ENST00000460601 TONSLQ96HA7 1378 aa24.39■■□□□ 1.5
NELFCD-201ENST00000460601 VWDEQ8N2E2 1590 aa24.37■■□□□ 1.49
NELFCD-201ENST00000460601 RNF17Q9BXT8 1623 aaKnown RBP24.37■■□□□ 1.49
NELFCD-201ENST00000460601 RPRD2Q5VT52 1461 aaKnown RBP24.37■■□□□ 1.49
NELFCD-201ENST00000460601 KANK1Q14678 1352 aa24.35■■□□□ 1.49
NELFCD-201ENST00000460601 SIGLEC1Q9BZZ2 1709 aa24.34■■□□□ 1.49
NELFCD-201ENST00000460601 ATP10AO60312 1499 aa24.34■■□□□ 1.49
NELFCD-201ENST00000460601 E9PCH4 1651 aa24.33■■□□□ 1.49
NELFCD-201ENST00000460601 PLA2R1Q13018 1463 aa24.33■■□□□ 1.49
NELFCD-201ENST00000460601 BCORL1Q5H9F3 1711 aa24.33■■□□□ 1.49
NELFCD-201ENST00000460601 CEP152O94986 1710 aa24.32■■□□□ 1.48
NELFCD-201ENST00000460601 ARHGEF40Q8TER5 1519 aa24.31■■□□□ 1.48
NELFCD-201ENST00000460601 TIMELESSQ9UNS1 1208 aa24.31■■□□□ 1.48
NELFCD-201ENST00000460601 TET3O43151 1660 aa24.3■■□□□ 1.48
NELFCD-201ENST00000460601 L3MBTL2Q969R5 705 aa24.29■■□□□ 1.48
NELFCD-201ENST00000460601 PPP1R15AO75807 674 aaPredicted RBP24.28■■□□□ 1.48
NELFCD-201ENST00000460601 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
NELFCD-201ENST00000460601 EFCAB6Q5THR3 1501 aa24.25■■□□□ 1.47
NELFCD-201ENST00000460601 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
NELFCD-201ENST00000460601 REREQ9P2R6 1566 aa24.24■■□□□ 1.47
NELFCD-201ENST00000460601 ABCC3O15438 1527 aa24.24■■□□□ 1.47
NELFCD-201ENST00000460601 LMTK2Q8IWU2 1503 aa24.23■■□□□ 1.47
NELFCD-201ENST00000460601 MLECQ14165 292 aa24.21■■□□□ 1.47
NELFCD-201ENST00000460601 NPATQ14207 1427 aa24.2■■□□□ 1.46
NELFCD-201ENST00000460601 SPHKAPQ2M3C7 1700 aa24.19■■□□□ 1.46
NELFCD-201ENST00000460601 AGLP35573 1532 aa24.19■■□□□ 1.46
NELFCD-201ENST00000460601 PTPRTO14522 1441 aa24.17■■□□□ 1.46
NELFCD-201ENST00000460601 CAMSAP1Q5T5Y3 1602 aa24.17■■□□□ 1.46
NELFCD-201ENST00000460601 UGGT1Q9NYU2 1555 aa24.17■■□□□ 1.46
NELFCD-201ENST00000460601 TRPM2O94759 1503 aa24.17■■□□□ 1.46
NELFCD-201ENST00000460601 CFAP65Q6ZU64 1925 aaKnown RBP24.16■■□□□ 1.46
NELFCD-201ENST00000460601 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
NELFCD-201ENST00000460601 CLTCL1P53675 1640 aa24.14■■□□□ 1.45
NELFCD-201ENST00000460601 ARID4BQ4LE39 1312 aaPredicted RBP24.13■■□□□ 1.45
NELFCD-201ENST00000460601 NBPF8Q3BBV2 869 aa24.12■■□□□ 1.45
NELFCD-201ENST00000460601 ZC3H13Q5T200 1668 aaKnown RBP24.12■■□□□ 1.45
NELFCD-201ENST00000460601 ZNF326Q5BKZ1 582 aaKnown RBP24.1■■□□□ 1.45
NELFCD-201ENST00000460601 KDM2AQ9Y2K7 1162 aa24.09■■□□□ 1.45
NELFCD-201ENST00000460601 ZNF316A6NFI3 1004 aaPredicted RBP24.08■■□□□ 1.45
NELFCD-201ENST00000460601 DCAF11Q8TEB1 546 aa24.08■■□□□ 1.45
NELFCD-201ENST00000460601 CLTCQ00610 1675 aaKnown RBP24.07■■□□□ 1.44
NELFCD-201ENST00000460601 SPATA31E1Q6ZUB1 1445 aa24.06■■□□□ 1.44
NELFCD-201ENST00000460601 HIRIP3Q9BW71 556 aaPredicted RBP24.04■■□□□ 1.44
NELFCD-201ENST00000460601 ARHGAP31Q2M1Z3 1444 aa24.04■■□□□ 1.44
NELFCD-201ENST00000460601 FBXO31Q5XUX0 539 aaPredicted RBP24.04■■□□□ 1.44
NELFCD-201ENST00000460601 SYNMO15061 1565 aa24.02■■□□□ 1.44
NELFCD-201ENST00000460601 NOS1P29475 1434 aa24.02■■□□□ 1.44
NELFCD-201ENST00000460601 CNTLNQ9NXG0 1405 aa24.01■■□□□ 1.43
NELFCD-201ENST00000460601 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
NELFCD-201ENST00000460601 PREX1Q8TCU6 1659 aa23.98■■□□□ 1.43
NELFCD-201ENST00000460601 MROH2AA6NES4 1674 aa23.98■■□□□ 1.43
NELFCD-201ENST00000460601 CHGAP10645 457 aaKnown RBP23.96■■□□□ 1.43
NELFCD-201ENST00000460601 ESF1Q9H501 851 aaKnown RBP23.96■■□□□ 1.43
NELFCD-201ENST00000460601 UHRF1BP1Q6BDS2 1440 aa23.95■■□□□ 1.43
NELFCD-201ENST00000460601 KIF1BO60333 1816 aa23.95■■□□□ 1.42
NELFCD-201ENST00000460601 ERVK-7P63135 1459 aa23.94■■□□□ 1.42
NELFCD-201ENST00000460601 ZMYM3Q14202 1370 aa23.93■■□□□ 1.42
NELFCD-201ENST00000460601 PIK3C2BO00750 1634 aa23.93■■□□□ 1.42
NELFCD-201ENST00000460601 IDI1Q13907 227 aa23.93■■□□□ 1.42
NELFCD-201ENST00000460601 PRAG1Q86YV5 1406 aa23.93■■□□□ 1.42
NELFCD-201ENST00000460601 ADGRB3O60242 1522 aa23.92■■□□□ 1.42
NELFCD-201ENST00000460601 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
NELFCD-201ENST00000460601 NEURL4Q96JN8 1562 aa23.87■■□□□ 1.41
NELFCD-201ENST00000460601 SPATA31D1Q6ZQQ2 1576 aa23.86■■□□□ 1.41
NELFCD-201ENST00000460601 HSPA5P11021 654 aaKnown RBP23.86■■□□□ 1.41
NELFCD-201ENST00000460601 CEBPAP49715 358 aaPredicted RBP23.86■■□□□ 1.41
NELFCD-201ENST00000460601 PLPPR3Q6T4P5 718 aa23.86■■□□□ 1.41
NELFCD-201ENST00000460601 NBPF1Q3BBV0 1214 aa23.85■■□□□ 1.41
NELFCD-201ENST00000460601 SLC52A1Q9NWF4 448 aa23.85■■□□□ 1.41
NELFCD-201ENST00000460601 TRPM1Q7Z4N2 1603 aa23.85■■□□□ 1.41
NELFCD-201ENST00000460601 MADDQ8WXG6 1647 aa23.84■■□□□ 1.41
NELFCD-201ENST00000460601 FER1L4A9Z1Z3 1794 aa23.84■■□□□ 1.41
NELFCD-201ENST00000460601 NUTM2DQ5VT03 806 aaPredicted RBP23.83■■□□□ 1.41
NELFCD-201ENST00000460601 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.4
NELFCD-201ENST00000460601 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.4
NELFCD-201ENST00000460601 IFT172Q9UG01 1749 aa23.82■■□□□ 1.4
NELFCD-201ENST00000460601 ROCK2O75116 1388 aaKnown RBP23.82■■□□□ 1.4
NELFCD-201ENST00000460601 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
NELFCD-201ENST00000460601 DIEXFQ68CQ4 756 aaKnown RBP23.81■■□□□ 1.4
NELFCD-201ENST00000460601 CARD11Q9BXL7 1154 aa23.81■■□□□ 1.4
NELFCD-201ENST00000460601 TMEM131LA2VDJ0 1609 aa23.8■■□□□ 1.4
NELFCD-201ENST00000460601 USP47Q96K76 1375 aa23.78■■□□□ 1.4
NELFCD-201ENST00000460601 PPLO60437 1756 aa23.78■■□□□ 1.4
NELFCD-201ENST00000460601 C3P01024 1663 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms