RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 ZMYM4Q5VZL5 1548 aa7.3□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 ARHGAP5Q13017 1502 aa7.29□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 CAPN15O75808 1086 aa7.29□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 WDR70Q9NW82 654 aa7.29□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 ADGRL1O94910 1474 aa7.29□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 MAGI2Q86UL8 1455 aa7.29□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 POGZQ7Z3K3 1410 aa7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 GPATCH8Q9UKJ3 1502 aaKnown RBP7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 CDC42BPAQ5VT25 1732 aa7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 RICTORQ6R327 1708 aa7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 CDC42BPBQ9Y5S2 1711 aa7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 NUBP1P53384 320 aa7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 NEUROD2Q15784 382 aa7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 KCNV2Q8TDN2 545 aa7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 ZC3H15Q8WU90 426 aaKnown RBP7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 LRRC9Q6ZRR7 1453 aa7.28□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 SCAPERQ9BY12 1400 aa7.27□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 ABCC1P33527 1531 aa7.27□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 ARHGEF40Q8TER5 1519 aa7.27□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 KIAA1107Q9UPP5 1409 aa7.27□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 ITSN2Q9NZM3 1697 aa7.26□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 KDM5CP41229 1560 aa7.26□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 NCOA2Q15596 1464 aa7.26□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 ZNF518AQ6AHZ1 1483 aa7.26□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 PLEKHH2Q8IVE3 1493 aa7.26□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 CCNB3Q8WWL7 1395 aa7.26□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 RAPGEF3O95398 923 aa7.26□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 SUPT6HQ7KZ85 1726 aaKnown RBP7.26□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 ARHGEF1Q92888 912 aaKnown RBP7.25□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 ZMYND15Q9H091 742 aa7.25□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 SAMD9LQ8IVG5 1584 aa7.25□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 ZFYVE16Q7Z3T8 1539 aa7.24□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 ARHGEF12Q9NZN5 1544 aa7.24□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 MLH3Q9UHC1 1453 aa7.24□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 DCAF8Q5TAQ9 597 aa7.23□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 CFDP1Q9UEE9 299 aaPredicted RBP7.23□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 SYCP2Q9BX26 1530 aa7.22□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 HECW2Q9P2P5 1572 aa7.22□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 REREQ9P2R6 1566 aa7.22□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 MIA2Q96PC5 1412 aa7.22□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 TRAPPC8Q9Y2L5 1435 aa7.22□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 KANK4Q5T7N3 995 aaPredicted RBP7.22□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 RSPH6AQ9H0K4 717 aa7.22□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 MYOM3Q5VTT5 1437 aa7.21□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 YEATS2Q9ULM3 1422 aa7.21□□□□□ -1.25
RNU6ATAC28P-201ENST00000459249 NPM2Q86SE8 214 aaKnown RBP7.21□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 BCL11BQ9C0K0 894 aaPredicted RBP7.21□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 SLC24A3Q9HC58 644 aa7.21□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 STK24Q9Y6E0 443 aa7.21□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ATP10AO60312 1499 aa7.21□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 MBD5Q9P267 1494 aa7.21□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 C9orf84Q5VXU9 1444 aa7.2□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 KDM4FA0A1W2PPD8 638 aa7.2□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 HRCP23327 699 aa7.2□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 AFAP1Q8N556 730 aa7.2□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ARHGEF5Q12774 1597 aa7.2□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 INO80Q9ULG1 1556 aaPredicted RBP7.2□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 DIP2CQ9Y2E4 1556 aa7.2□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 RTEL1-TNFRSF6BF6WH68 1400 aa7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 CAMSAP2Q08AD1 1489 aa7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 CCDC141Q6ZP82 1450 aa7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 AGLP35573 1532 aa7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ZMYND10O75800 440 aa7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 RSPH4AQ5TD94 716 aa7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ZFP91Q96JP5 570 aaPredicted RBP7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ADAMTSL3P82987 1691 aa7.19□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 BCORL1Q5H9F3 1711 aa7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 KIDINS220Q9ULH0 1771 aa7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ATP7AQ04656 1500 aa7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 TESPA1A2RU30 521 aaPredicted RBP7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ABCB7O75027 752 aa7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 FAM212AQ96EL1 285 aa7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 RNF39Q9H2S5 420 aa7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ZNF777Q9ULD5 760 aaPredicted RBP7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ABCA6Q8N139 1617 aa7.18□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 TCOF1Q13428 1488 aaKnown RBP7.17□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 HNRNPMP52272 730 aaKnown RBP eCLIP7.17□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 C1QBPQ07021 282 aaKnown RBP7.17□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 CADPS2Q86UW7 1296 aa7.17□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 SPAG9O60271 1321 aaKnown RBP7.17□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 ZNF644Q9H582 1327 aaPredicted RBP7.17□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 FGD6Q6ZV73 1430 aa7.17□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 PLXNC1O60486 1568 aa7.16□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 MAST1Q9Y2H9 1570 aa7.16□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 SIGLEC1Q9BZZ2 1709 aa7.16□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 SHANK2Q9UPX8 1470 aa7.16□□□□□ -1.26
RNU6ATAC28P-201ENST00000459249 PTPN23Q9H3S7 1636 aa7.15□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 A2MP01023 1474 aa7.14□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 ARID4BQ4LE39 1312 aaPredicted RBP7.14□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 ADGBQ8N7X0 1667 aa7.14□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 MADDQ8WXG6 1647 aa7.13□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 PTPRMP28827 1452 aa7.13□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 SMYD5Q6GMV2 418 aa7.13□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 DNMT1P26358 1616 aaKnown RBP7.12□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 FAM135AQ9P2D6 1515 aa7.12□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 ABCC5O15440 1437 aa7.12□□□□□ -1.27
RNU6ATAC28P-201ENST00000459249 DHX29Q7Z478 1369 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms