RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 KCNJ4P48050 445 aa13.61□□□□□ -0.23
AMBRA1-202ENST00000458649 U2AF1Q01081 240 aaKnown RBP eCLIP13.61□□□□□ -0.23
AMBRA1-202ENST00000458649 STK31Q9BXU1 1019 aa13.61□□□□□ -0.23
AMBRA1-202ENST00000458649 EVA1CP58658 441 aa13.6□□□□□ -0.23
AMBRA1-202ENST00000458649 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
AMBRA1-202ENST00000458649 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
AMBRA1-202ENST00000458649 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
AMBRA1-202ENST00000458649 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-202ENST00000458649 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
AMBRA1-202ENST00000458649 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
AMBRA1-202ENST00000458649 ATF3P18847 181 aa13.58□□□□□ -0.24
AMBRA1-202ENST00000458649 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
AMBRA1-202ENST00000458649 ABCA10Q8WWZ4 1543 aa13.58□□□□□ -0.24
AMBRA1-202ENST00000458649 NLRP13Q86W25 1043 aa13.58□□□□□ -0.24
AMBRA1-202ENST00000458649 KIF15Q9NS87 1388 aa13.57□□□□□ -0.24
AMBRA1-202ENST00000458649 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
AMBRA1-202ENST00000458649 VSIG10Q8N0Z9 540 aa13.57□□□□□ -0.24
AMBRA1-202ENST00000458649 G3V3G9 751 aa13.56□□□□□ -0.24
AMBRA1-202ENST00000458649 DCAF8Q5TAQ9 597 aa13.56□□□□□ -0.24
AMBRA1-202ENST00000458649 PRG4Q92954 1404 aaPredicted RBP13.56□□□□□ -0.24
AMBRA1-202ENST00000458649 NUTM2DQ5VT03 806 aaPredicted RBP13.56□□□□□ -0.24
AMBRA1-202ENST00000458649 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
AMBRA1-202ENST00000458649 LAMC3Q9Y6N6 1575 aa13.55□□□□□ -0.24
AMBRA1-202ENST00000458649 COG3Q96JB2 828 aa13.55□□□□□ -0.24
AMBRA1-202ENST00000458649 USP47Q96K76 1375 aa13.55□□□□□ -0.24
AMBRA1-202ENST00000458649 RBM19Q9Y4C8 960 aaKnown RBP13.55□□□□□ -0.24
AMBRA1-202ENST00000458649 TIAM1Q13009 1591 aa13.55□□□□□ -0.24
AMBRA1-202ENST00000458649 ANKRD50Q9ULJ7 1429 aa13.55□□□□□ -0.24
AMBRA1-202ENST00000458649 GTF2E1P29083 439 aaPredicted RBP13.55□□□□□ -0.24
AMBRA1-202ENST00000458649 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
AMBRA1-202ENST00000458649 MCCP23508 829 aa13.54□□□□□ -0.24
AMBRA1-202ENST00000458649 TNNT3P45378 269 aaPredicted RBP13.54□□□□□ -0.24
AMBRA1-202ENST00000458649 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
AMBRA1-202ENST00000458649 PRKRIP1Q9H875 184 aaPredicted RBP13.53□□□□□ -0.24
AMBRA1-202ENST00000458649 EHBP1L1Q8N3D4 1523 aa13.53□□□□□ -0.24
AMBRA1-202ENST00000458649 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.24
AMBRA1-202ENST00000458649 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.25
AMBRA1-202ENST00000458649 MSNP26038 577 aaKnown RBP13.52□□□□□ -0.25
AMBRA1-202ENST00000458649 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
AMBRA1-202ENST00000458649 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
AMBRA1-202ENST00000458649 MIA2Q96PC5 1412 aa13.52□□□□□ -0.25
AMBRA1-202ENST00000458649 RGS3P49796 1198 aa13.51□□□□□ -0.25
AMBRA1-202ENST00000458649 PSME1Q06323 249 aa13.51□□□□□ -0.25
AMBRA1-202ENST00000458649 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
AMBRA1-202ENST00000458649 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
AMBRA1-202ENST00000458649 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
AMBRA1-202ENST00000458649 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
AMBRA1-202ENST00000458649 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
AMBRA1-202ENST00000458649 CHAF1AQ13111 956 aaPredicted RBP13.5□□□□□ -0.25
AMBRA1-202ENST00000458649 GORABQ5T7V8 394 aa13.5□□□□□ -0.25
AMBRA1-202ENST00000458649 PANK3Q9H999 370 aa13.49□□□□□ -0.25
AMBRA1-202ENST00000458649 MYBBP1AQ9BQG0 1328 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-202ENST00000458649 CGNL1Q0VF96 1302 aa13.49□□□□□ -0.25
AMBRA1-202ENST00000458649 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
AMBRA1-202ENST00000458649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.252e-7■■■□□ 18.3
AMBRA1-202ENST00000458649 LTV1Q96GA3 475 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-202ENST00000458649 ARHGAP5Q13017 1502 aa13.49□□□□□ -0.25
AMBRA1-202ENST00000458649 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
AMBRA1-202ENST00000458649 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-202ENST00000458649 PRKCSHP14314 528 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-202ENST00000458649 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-202ENST00000458649 KIAA0586Q9BVV6 1533 aa13.48□□□□□ -0.25
AMBRA1-202ENST00000458649 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
AMBRA1-202ENST00000458649 HMMRO75330 724 aa13.47□□□□□ -0.25
AMBRA1-202ENST00000458649 NAP1L2Q9ULW6 460 aaPredicted RBP13.47□□□□□ -0.25
AMBRA1-202ENST00000458649 HECW1Q76N89 1606 aa13.47□□□□□ -0.25
AMBRA1-202ENST00000458649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.47□□□□□ -0.25
AMBRA1-202ENST00000458649 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
AMBRA1-202ENST00000458649 KIAA1211Q6ZU35 1233 aa13.46□□□□□ -0.25
AMBRA1-202ENST00000458649 TTC5Q8N0Z6 440 aa13.45□□□□□ -0.26
AMBRA1-202ENST00000458649 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
AMBRA1-202ENST00000458649 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
AMBRA1-202ENST00000458649 TEFQ10587 303 aa13.45□□□□□ -0.26
AMBRA1-202ENST00000458649 CUL7Q14999 1698 aa13.44□□□□□ -0.26
AMBRA1-202ENST00000458649 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
AMBRA1-202ENST00000458649 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
AMBRA1-202ENST00000458649 MSH5O43196 834 aa13.44□□□□□ -0.26
AMBRA1-202ENST00000458649 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
AMBRA1-202ENST00000458649 AFAP1Q8N556 730 aa13.43□□□□□ -0.26
AMBRA1-202ENST00000458649 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
AMBRA1-202ENST00000458649 KIF7Q2M1P5 1343 aa13.42□□□□□ -0.26
AMBRA1-202ENST00000458649 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
AMBRA1-202ENST00000458649 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
AMBRA1-202ENST00000458649 IQGAP2Q13576 1575 aa13.42□□□□□ -0.26
AMBRA1-202ENST00000458649 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
AMBRA1-202ENST00000458649 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
AMBRA1-202ENST00000458649 SUPT6HQ7KZ85 1726 aaKnown RBP13.41□□□□□ -0.26
AMBRA1-202ENST00000458649 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
AMBRA1-202ENST00000458649 FRAT2O75474 233 aaPredicted RBP13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 MAP3K1Q13233 1512 aa13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 URB2Q14146 1524 aaKnown RBP13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 C9orf84Q5VXU9 1444 aa13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 PKNOX2Q96KN3 472 aa13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 ZBED9Q6R2W3 1325 aa13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 PCF11O94913 1555 aaKnown RBP13.4□□□□□ -0.26
AMBRA1-202ENST00000458649 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-202ENST00000458649 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms