RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
SBDSP1-204ENST00000453858 RAPGEF2Q9Y4G8 1499 aa9.78□□□□□ -0.84
SBDSP1-204ENST00000453858 C3P01024 1663 aa9.77□□□□□ -0.84
SBDSP1-204ENST00000453858 CD44P16070 742 aaKnown RBP9.77□□□□□ -0.85
SBDSP1-204ENST00000453858 CPS1P31327 1500 aa9.77□□□□□ -0.85
SBDSP1-204ENST00000453858 PLA2R1Q13018 1463 aa9.76□□□□□ -0.85
SBDSP1-204ENST00000453858 EP400Q96L91 3159 aa9.75□□□□□ -0.85
SBDSP1-204ENST00000453858 HECW1Q76N89 1606 aa9.75□□□□□ -0.85
SBDSP1-204ENST00000453858 SHANK2Q9UPX8 1470 aa9.75□□□□□ -0.85
SBDSP1-204ENST00000453858 C9orf84Q5VXU9 1444 aa9.74□□□□□ -0.85
SBDSP1-204ENST00000453858 ARID3CA6NKF2 412 aa9.72□□□□□ -0.85
SBDSP1-204ENST00000453858 KIF27Q86VH2 1401 aa9.72□□□□□ -0.85
SBDSP1-204ENST00000453858 NPATQ14207 1427 aa9.71□□□□□ -0.86
SBDSP1-204ENST00000453858 ZNF579Q8NAF0 562 aaKnown RBP9.69□□□□□ -0.86
SBDSP1-204ENST00000453858 VWDEQ8N2E2 1590 aa9.67□□□□□ -0.86
SBDSP1-204ENST00000453858 SETBP1Q9Y6X0 1596 aa9.67□□□□□ -0.86
SBDSP1-204ENST00000453858 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
SBDSP1-204ENST00000453858 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
SBDSP1-204ENST00000453858 ZMYM3Q14202 1370 aa9.64□□□□□ -0.87
SBDSP1-204ENST00000453858 MNX1P50219 401 aaPredicted RBP9.64□□□□□ -0.87
SBDSP1-204ENST00000453858 RBM33Q96EV2 1170 aaKnown RBP9.64□□□□□ -0.87
SBDSP1-204ENST00000453858 AGLP35573 1532 aa9.64□□□□□ -0.87
SBDSP1-204ENST00000453858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.64□□□□□ -0.87
SBDSP1-204ENST00000453858 LRRC7Q96NW7 1537 aa9.63□□□□□ -0.87
SBDSP1-204ENST00000453858 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
SBDSP1-204ENST00000453858 FAM135BQ49AJ0 1406 aa9.63□□□□□ -0.87
SBDSP1-204ENST00000453858 CNTLNQ9NXG0 1405 aa9.63□□□□□ -0.87
SBDSP1-204ENST00000453858 GSE1Q14687 1217 aa9.62□□□□□ -0.87
SBDSP1-204ENST00000453858 NEURL4Q96JN8 1562 aa9.62□□□□□ -0.87
SBDSP1-204ENST00000453858 REREQ9P2R6 1566 aa9.61□□□□□ -0.87
SBDSP1-204ENST00000453858 ZNF142P52746 1687 aaPredicted RBP9.61□□□□□ -0.87
SBDSP1-204ENST00000453858 GOLGA3Q08378 1498 aa9.6□□□□□ -0.87
SBDSP1-204ENST00000453858 CFAP74Q9C0B2 1584 aa9.6□□□□□ -0.87
SBDSP1-204ENST00000453858 POTEIP0CG38 1075 aa9.6□□□□□ -0.87
SBDSP1-204ENST00000453858 AFAP1Q8N556 730 aa9.6□□□□□ -0.87
SBDSP1-204ENST00000453858 ESF1Q9H501 851 aaKnown RBP9.6□□□□□ -0.87
SBDSP1-204ENST00000453858 CDK12Q9NYV4 1490 aaPredicted RBP9.59□□□□□ -0.87
SBDSP1-204ENST00000453858 CEP170BQ9Y4F5 1589 aaPredicted RBP9.59□□□□□ -0.87
SBDSP1-204ENST00000453858 NUBP1P53384 320 aa9.59□□□□□ -0.87
SBDSP1-204ENST00000453858 UTRNP46939 3433 aa9.59□□□□□ -0.87
SBDSP1-204ENST00000453858 PAK3O75914 559 aaPredicted RBP9.58□□□□□ -0.88
SBDSP1-204ENST00000453858 RXRBP28702 533 aa9.58□□□□□ -0.88
SBDSP1-204ENST00000453858 LHX8Q68G74 356 aa9.58□□□□□ -0.88
SBDSP1-204ENST00000453858 STRCP1A6NGW2 1772 aa9.58□□□□□ -0.88
SBDSP1-204ENST00000453858 ZNF772Q68DY9 489 aaPredicted RBP9.57□□□□□ -0.88
SBDSP1-204ENST00000453858 CIZ1Q9ULV3 898 aaPredicted RBP9.57□□□□□ -0.88
SBDSP1-204ENST00000453858 PLCH2O75038 1416 aa9.56□□□□□ -0.88
SBDSP1-204ENST00000453858 DIP2CQ9Y2E4 1556 aa9.56□□□□□ -0.88
SBDSP1-204ENST00000453858 ECM2O94769 699 aaPredicted RBP9.56□□□□□ -0.88
SBDSP1-204ENST00000453858 FAM212AQ96EL1 285 aa9.56□□□□□ -0.88
SBDSP1-204ENST00000453858 MYO3AQ8NEV4 1616 aa9.56□□□□□ -0.88
SBDSP1-204ENST00000453858 RNF17Q9BXT8 1623 aaKnown RBP9.56□□□□□ -0.88
SBDSP1-204ENST00000453858 DNMT1P26358 1616 aaKnown RBP9.55□□□□□ -0.88
SBDSP1-204ENST00000453858 MED14O60244 1454 aa9.54□□□□□ -0.88
SBDSP1-204ENST00000453858 PLEKHD1A6NEE1 506 aa9.54□□□□□ -0.88
SBDSP1-204ENST00000453858 DCAF8Q5TAQ9 597 aa9.54□□□□□ -0.88
SBDSP1-204ENST00000453858 DCBLD2Q96PD2 775 aa9.54□□□□□ -0.88
SBDSP1-204ENST00000453858 MROH2AA6NES4 1674 aa9.54□□□□□ -0.88
SBDSP1-204ENST00000453858 KDM5CP41229 1560 aa9.54□□□□□ -0.88
SBDSP1-204ENST00000453858 A2ML1A8K2U0 1454 aa9.53□□□□□ -0.88
SBDSP1-204ENST00000453858 ANKLE2Q86XL3 938 aa9.52□□□□□ -0.89
SBDSP1-204ENST00000453858 LRP6O75581 1613 aa9.52□□□□□ -0.89
SBDSP1-204ENST00000453858 NUP153P49790 1475 aaKnown RBP9.52□□□□□ -0.89
SBDSP1-204ENST00000453858 MLH3Q9UHC1 1453 aa9.52□□□□□ -0.89
SBDSP1-204ENST00000453858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.51□□□□□ -0.89
SBDSP1-204ENST00000453858 SUPT6HQ7KZ85 1726 aaKnown RBP9.51□□□□□ -0.89
SBDSP1-204ENST00000453858 ZNF518AQ6AHZ1 1483 aa9.51□□□□□ -0.89
SBDSP1-204ENST00000453858 JCADQ9P266 1359 aa9.5□□□□□ -0.89
SBDSP1-204ENST00000453858 GALR2O43603 387 aaPredicted RBP9.5□□□□□ -0.89
SBDSP1-204ENST00000453858 EFCAB2Q5VUJ9 269 aa9.5□□□□□ -0.89
SBDSP1-204ENST00000453858 ABCA6Q8N139 1617 aa9.49□□□□□ -0.89
SBDSP1-204ENST00000453858 POLR1AO95602 1720 aaPredicted RBP9.49□□□□□ -0.89
SBDSP1-204ENST00000453858 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
SBDSP1-204ENST00000453858 NPHP4O75161 1426 aaPredicted RBP9.48□□□□□ -0.89
SBDSP1-204ENST00000453858 CHRM1P11229 460 aaPredicted RBP9.48□□□□□ -0.89
SBDSP1-204ENST00000453858 YY1P25490 414 aa9.48□□□□□ -0.89
SBDSP1-204ENST00000453858 RGS12O14924 1447 aa9.48□□□□□ -0.89
SBDSP1-204ENST00000453858 LRP5O75197 1615 aa9.47□□□□□ -0.89
SBDSP1-204ENST00000453858 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
SBDSP1-204ENST00000453858 XIRP1Q702N8 1843 aaKnown RBP9.47□□□□□ -0.89
SBDSP1-204ENST00000453858 SYNMO15061 1565 aa9.46□□□□□ -0.89
SBDSP1-204ENST00000453858 FAM9AQ8IZU1 332 aaPredicted RBP9.46□□□□□ -0.9
SBDSP1-204ENST00000453858 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
SBDSP1-204ENST00000453858 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
SBDSP1-204ENST00000453858 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
SBDSP1-204ENST00000453858 SPATA31A6Q5VVP1 1343 aa9.45□□□□□ -0.9
SBDSP1-204ENST00000453858 CDK13Q14004 1512 aaKnown RBP9.45□□□□□ -0.9
SBDSP1-204ENST00000453858 DEPDC5O75140 1603 aa9.45□□□□□ -0.9
SBDSP1-204ENST00000453858 ROBO1Q9Y6N7 1651 aa9.44□□□□□ -0.9
SBDSP1-204ENST00000453858 NUTM2BA6NNL0 878 aaPredicted RBP9.43□□□□□ -0.9
SBDSP1-204ENST00000453858 NUTM2EB1AL46 878 aaPredicted RBP9.43□□□□□ -0.9
SBDSP1-204ENST00000453858 NUTM2DQ5VT03 806 aaPredicted RBP9.43□□□□□ -0.9
SBDSP1-204ENST00000453858 NUTM2AQ8IVF1 878 aaPredicted RBP9.43□□□□□ -0.9
SBDSP1-204ENST00000453858 THEMISQ8N1K5 641 aaPredicted RBP9.43□□□□□ -0.9
SBDSP1-204ENST00000453858 RBM6P78332 1123 aaKnown RBP9.42□□□□□ -0.9
SBDSP1-204ENST00000453858 ABCC1P33527 1531 aa9.41□□□□□ -0.9
SBDSP1-204ENST00000453858 ATAD2Q6PL18 1390 aa9.41□□□□□ -0.9
SBDSP1-204ENST00000453858 FBXO31Q5XUX0 539 aaPredicted RBP9.41□□□□□ -0.9
SBDSP1-204ENST00000453858 CCDC125Q86Z20 511 aa9.41□□□□□ -0.9
SBDSP1-204ENST00000453858 MYT1LQ9UL68 1186 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms