RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ARHGEF1Q92888 912 aaKnown RBP7.49□□□□□ -1.21
HMGB3P21-201ENST00000452483 POTEEQ6S8J3 1075 aa7.48□□□□□ -1.21
HMGB3P21-201ENST00000452483 AXIN2Q9Y2T1 843 aa7.48□□□□□ -1.21
HMGB3P21-201ENST00000452483 PHF14O94880 888 aa7.47□□□□□ -1.21
HMGB3P21-201ENST00000452483 PTGER2P43116 358 aa7.47□□□□□ -1.21
HMGB3P21-201ENST00000452483 DDX12PQ92771 950 aa7.47□□□□□ -1.21
HMGB3P21-201ENST00000452483 ZDHHC16Q969W1 377 aa7.47□□□□□ -1.21
HMGB3P21-201ENST00000452483 PCDHGA10Q9Y5H3 936 aa7.47□□□□□ -1.21
HMGB3P21-201ENST00000452483 LSM11P83369 360 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGB3P21-201ENST00000452483 KCNH8Q96L42 1107 aa7.46□□□□□ -1.22
HMGB3P21-201ENST00000452483 KCNK17Q96T54 332 aa7.46□□□□□ -1.22
HMGB3P21-201ENST00000452483 BCL2L12Q9HB09 334 aa7.46□□□□□ -1.22
HMGB3P21-201ENST00000452483 ARHGAP33O14559 1287 aa7.45□□□□□ -1.22
HMGB3P21-201ENST00000452483 UBTFP17480 764 aaKnown RBP7.45□□□□□ -1.22
HMGB3P21-201ENST00000452483 TYW1BQ6NUM6 668 aa7.45□□□□□ -1.22
HMGB3P21-201ENST00000452483 FBXW7Q969H0 707 aa7.45□□□□□ -1.22
HMGB3P21-201ENST00000452483 ADAM33Q9BZ11 813 aa7.45□□□□□ -1.22
HMGB3P21-201ENST00000452483 PSEN2P49810 448 aa7.44□□□□□ -1.22
HMGB3P21-201ENST00000452483 EPAS1Q99814 870 aa7.44□□□□□ -1.22
HMGB3P21-201ENST00000452483 PTPREP23469 700 aa7.43□□□□□ -1.22
HMGB3P21-201ENST00000452483 GRXCR2A6NFK2 248 aa7.42□□□□□ -1.22
HMGB3P21-201ENST00000452483 EN1Q05925 392 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P21-201ENST00000452483 DMRTA1Q5VZB9 504 aa7.42□□□□□ -1.22
HMGB3P21-201ENST00000452483 ANKRD13DQ6ZTN6 518 aa7.42□□□□□ -1.22
HMGB3P21-201ENST00000452483 RBM33Q96EV2 1170 aaKnown RBP7.41□□□□□ -1.22
HMGB3P21-201ENST00000452483 PPP1R3GB7ZBB8 358 aa7.39□□□□□ -1.23
HMGB3P21-201ENST00000452483 MAP3K7O43318 606 aa7.39□□□□□ -1.23
HMGB3P21-201ENST00000452483 MLLT3P42568 568 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P21-201ENST00000452483 ADGRD1Q6QNK2 874 aa7.39□□□□□ -1.23
HMGB3P21-201ENST00000452483 SEMA3EO15041 775 aa7.38□□□□□ -1.23
HMGB3P21-201ENST00000452483 OSBPP22059 807 aa7.38□□□□□ -1.23
HMGB3P21-201ENST00000452483 PRIM1P49642 420 aaKnown RBP7.38□□□□□ -1.23
HMGB3P21-201ENST00000452483 TK2O00142 265 aa7.37□□□□□ -1.23
HMGB3P21-201ENST00000452483 COL9A1P20849 921 aa7.37□□□□□ -1.23
HMGB3P21-201ENST00000452483 HRCP23327 699 aa7.37□□□□□ -1.23
HMGB3P21-201ENST00000452483 TSR1Q2NL82 804 aaKnown RBP7.37□□□□□ -1.23
HMGB3P21-201ENST00000452483 C6orf132Q5T0Z8 1188 aa7.37□□□□□ -1.23
HMGB3P21-201ENST00000452483 ZBED2Q9BTP6 218 aa7.37□□□□□ -1.23
HMGB3P21-201ENST00000452483 SLC4A5Q9BY07 1137 aa7.35□□□□□ -1.23
HMGB3P21-201ENST00000452483 VPS9D1Q9Y2B5 631 aa7.35□□□□□ -1.23
HMGB3P21-201ENST00000452483 CDHR5Q9HBB8 845 aa7.34□□□□□ -1.23
HMGB3P21-201ENST00000452483 TESPA1A2RU30 521 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P21-201ENST00000452483 HRO43593 1189 aa7.33□□□□□ -1.24
HMGB3P21-201ENST00000452483 PROX2Q3B8N5 592 aa7.33□□□□□ -1.24
HMGB3P21-201ENST00000452483 MYT1LQ9UL68 1186 aa7.33□□□□□ -1.24
HMGB3P21-201ENST00000452483 RNF166Q96A37 237 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P21-201ENST00000452483 CERKQ8TCT0 537 aa7.3□□□□□ -1.24
HMGB3P21-201ENST00000452483 TRIM6-TRIM34B2RNG4 842 aa7.29□□□□□ -1.24
HMGB3P21-201ENST00000452483 SMYD5Q6GMV2 418 aa7.29□□□□□ -1.24
HMGB3P21-201ENST00000452483 NBPF3Q9H094 633 aa7.29□□□□□ -1.24
HMGB3P21-201ENST00000452483 RABGEF1Q9UJ41 708 aa7.29□□□□□ -1.24
HMGB3P21-201ENST00000452483 BHMG1C9JSJ3 638 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P21-201ENST00000452483 STAC3Q96MF2 364 aa7.28□□□□□ -1.24
HMGB3P21-201ENST00000452483 PRSS12P56730 875 aa7.27□□□□□ -1.25
HMGB3P21-201ENST00000452483 CDCA7LQ96GN5 454 aa7.27□□□□□ -1.25
HMGB3P21-201ENST00000452483 RBM27Q9P2N5 1060 aaKnown RBP7.27□□□□□ -1.25
HMGB3P21-201ENST00000452483 TSKSQ9UJT2 592 aa7.27□□□□□ -1.25
HMGB3P21-201ENST00000452483 CCDC9Q9Y3X0 531 aaKnown RBP7.27□□□□□ -1.25
HMGB3P21-201ENST00000452483 NUTM2FA1L443 756 aa7.26□□□□□ -1.25
HMGB3P21-201ENST00000452483 ONECUT3O60422 494 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P21-201ENST00000452483 RBM26Q5T8P6 1007 aaKnown RBP7.26□□□□□ -1.25
HMGB3P21-201ENST00000452483 MRPL50Q8N5N7 158 aaKnown RBP7.26□□□□□ -1.25
HMGB3P21-201ENST00000452483 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P21-201ENST00000452483 KIAA1468Q9P260 1216 aa7.26□□□□□ -1.25
HMGB3P21-201ENST00000452483 EIF5BO60841 1220 aaKnown RBP7.25□□□□□ -1.25
HMGB3P21-201ENST00000452483 PTGDRQ13258 359 aa7.25□□□□□ -1.25
HMGB3P21-201ENST00000452483 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P21-201ENST00000452483 PADI6Q6TGC4 694 aa7.24□□□□□ -1.25
HMGB3P21-201ENST00000452483 FAM198AQ9UFP1 575 aa7.24□□□□□ -1.25
HMGB3P21-201ENST00000452483 SEPT9Q9UHD8 586 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P21-201ENST00000452483 NBPF26B4DH59 902 aa7.23□□□□□ -1.25
HMGB3P21-201ENST00000452483 LAPTM4BQ86VI4 370 aa7.23□□□□□ -1.25
HMGB3P21-201ENST00000452483 PACS2Q86VP3 889 aa7.23□□□□□ -1.25
HMGB3P21-201ENST00000452483 ZBTB7CA1YPR0 619 aa7.22□□□□□ -1.25
HMGB3P21-201ENST00000452483 GOLGA8CPA6NN73 597 aa7.22□□□□□ -1.25
HMGB3P21-201ENST00000452483 FCHSD2O94868 740 aa7.22□□□□□ -1.25
HMGB3P21-201ENST00000452483 KCTD12Q96CX2 325 aaKnown RBP7.22□□□□□ -1.25
HMGB3P21-201ENST00000452483 GPR37O15354 613 aa7.21□□□□□ -1.26
HMGB3P21-201ENST00000452483 FAM98CQ17RN3 349 aaKnown RBP7.21□□□□□ -1.26
HMGB3P21-201ENST00000452483 GPIHBP1Q8IV16 184 aa7.21□□□□□ -1.26
HMGB3P21-201ENST00000452483 TTC13Q8NBP0 860 aa7.21□□□□□ -1.26
HMGB3P21-201ENST00000452483 C3orf80F5H4A9 247 aa7.2□□□□□ -1.26
HMGB3P21-201ENST00000452483 WNT2BQ93097 391 aa7.2□□□□□ -1.26
HMGB3P21-201ENST00000452483 ARID3AQ99856 593 aa7.2□□□□□ -1.26
HMGB3P21-201ENST00000452483 PNMA3Q9UL41 463 aa7.2□□□□□ -1.26
HMGB3P21-201ENST00000452483 SMAPO00193 183 aa7.19□□□□□ -1.26
HMGB3P21-201ENST00000452483 HIC1Q14526 733 aa7.19□□□□□ -1.26
HMGB3P21-201ENST00000452483 ANKK1Q8NFD2 765 aa7.19□□□□□ -1.26
HMGB3P21-201ENST00000452483 TATDN2Q93075 761 aa7.19□□□□□ -1.26
HMGB3P21-201ENST00000452483 ZFRQ96KR1 1074 aaKnown RBP7.19□□□□□ -1.26
HMGB3P21-201ENST00000452483 NEUROD2Q15784 382 aa7.18□□□□□ -1.26
HMGB3P21-201ENST00000452483 THSD4Q6ZMP0 1018 aa7.18□□□□□ -1.26
HMGB3P21-201ENST00000452483 NUDT18Q6ZVK8 323 aa7.18□□□□□ -1.26
HMGB3P21-201ENST00000452483 RSPH6AQ9H0K4 717 aa7.18□□□□□ -1.26
HMGB3P21-201ENST00000452483 ZMYND15Q9H091 742 aa7.17□□□□□ -1.26
HMGB3P21-201ENST00000452483 GNPATO15228 680 aa7.16□□□□□ -1.26
HMGB3P21-201ENST00000452483 BCAMP50895 628 aa7.16□□□□□ -1.26
HMGB3P21-201ENST00000452483 HCSTQ9UBK5 93 aa7.16□□□□□ -1.26
HMGB3P21-201ENST00000452483 LMOD2Q6P5Q4 547 aa7.15□□□□□ -1.26
HMGB3P21-201ENST00000452483 ADGRG1Q9Y653 693 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms