RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 RIMS1Q86UR5 1692 aaKnown RBP15.63■□□□□ 0.09
PKP4-206ENST00000452162 ANKRD30AQ9BXX3 1397 aa15.63■□□□□ 0.09
PKP4-206ENST00000452162 ADGRL2O95490 1459 aa15.62■□□□□ 0.09
PKP4-206ENST00000452162 KIF3BO15066 747 aa15.62■□□□□ 0.09
PKP4-206ENST00000452162 DUOX2Q9NRD8 1548 aa15.62■□□□□ 0.09
PKP4-206ENST00000452162 GGT6Q6P531 493 aa15.61■□□□□ 0.09
PKP4-206ENST00000452162 AEBP2Q6ZN18 517 aaPredicted RBP15.6■□□□□ 0.09
PKP4-206ENST00000452162 PTPRMP28827 1452 aa15.59■□□□□ 0.09
PKP4-206ENST00000452162 NAIPQ13075 1403 aa15.59■□□□□ 0.09
PKP4-206ENST00000452162 EIF2AK4Q9P2K8 1649 aaKnown RBP15.58■□□□□ 0.08
PKP4-206ENST00000452162 ROCK1Q13464 1354 aa15.57■□□□□ 0.08
PKP4-206ENST00000452162 ERBINQ96RT1 1412 aa15.56■□□□□ 0.08
PKP4-206ENST00000452162 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
PKP4-206ENST00000452162 GCC2Q8IWJ2 1684 aa15.55■□□□□ 0.08
PKP4-206ENST00000452162 RNF17Q9BXT8 1623 aaKnown RBP15.55■□□□□ 0.08
PKP4-206ENST00000452162 CLTCQ00610 1675 aaKnown RBP15.55■□□□□ 0.08
PKP4-206ENST00000452162 ESF1Q9H501 851 aaKnown RBP15.54■□□□□ 0.08
PKP4-206ENST00000452162 MROH1Q8NDA8 1641 aa15.54■□□□□ 0.08
PKP4-206ENST00000452162 ANKRD50Q9ULJ7 1429 aa15.53■□□□□ 0.08
PKP4-206ENST00000452162 CEBPAP49715 358 aaPredicted RBP15.53■□□□□ 0.08
PKP4-206ENST00000452162 C3P01024 1663 aa15.52■□□□□ 0.08
PKP4-206ENST00000452162 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
PKP4-206ENST00000452162 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
PKP4-206ENST00000452162 MROH2AA6NES4 1674 aa15.51■□□□□ 0.07
PKP4-206ENST00000452162 DEPDC5O75140 1603 aa15.5■□□□□ 0.07
PKP4-206ENST00000452162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.076e-10■■□□□ 11.5
PKP4-206ENST00000452162 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
PKP4-206ENST00000452162 KDM5DQ9BY66 1539 aa15.49■□□□□ 0.07
PKP4-206ENST00000452162 ZMYM3Q14202 1370 aa15.49■□□□□ 0.07
PKP4-206ENST00000452162 CEP152O94986 1710 aa15.49■□□□□ 0.07
PKP4-206ENST00000452162 PRDM15P57071 1507 aaPredicted RBP15.48■□□□□ 0.07
PKP4-206ENST00000452162 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
PKP4-206ENST00000452162 TIMELESSQ9UNS1 1208 aa15.47■□□□□ 0.07
PKP4-206ENST00000452162 ABCC3O15438 1527 aa15.47■□□□□ 0.07
PKP4-206ENST00000452162 FAM135AQ9P2D6 1515 aa15.47■□□□□ 0.07
PKP4-206ENST00000452162 CFAP65Q6ZU64 1925 aaKnown RBP15.46■□□□□ 0.07
PKP4-206ENST00000452162 ZC3H13Q5T200 1668 aaKnown RBP15.46■□□□□ 0.07
PKP4-206ENST00000452162 SETD1BQ9UPS6 1966 aaKnown RBP15.46■□□□□ 0.06
PKP4-206ENST00000452162 UNC13BO14795 1591 aa15.44■□□□□ 0.06
PKP4-206ENST00000452162 VWDEQ8N2E2 1590 aa15.44■□□□□ 0.06
PKP4-206ENST00000452162 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
PKP4-206ENST00000452162 CAMSAP1Q5T5Y3 1602 aa15.43■□□□□ 0.06
PKP4-206ENST00000452162 KANK1Q14678 1352 aa15.43■□□□□ 0.06
PKP4-206ENST00000452162 FBXO31Q5XUX0 539 aaPredicted RBP15.41■□□□□ 0.06
PKP4-206ENST00000452162 PZPP20742 1482 aa15.41■□□□□ 0.06
PKP4-206ENST00000452162 MIER1Q8N108 512 aa15.4■□□□□ 0.06
PKP4-206ENST00000452162 LMTK2Q8IWU2 1503 aa15.4■□□□□ 0.06
PKP4-206ENST00000452162 NPATQ14207 1427 aa15.39■□□□□ 0.05
PKP4-206ENST00000452162 PREX1Q8TCU6 1659 aa15.39■□□□□ 0.05
PKP4-206ENST00000452162 NUP155O75694 1391 aa15.39■□□□□ 0.05
PKP4-206ENST00000452162 IQGAP3Q86VI3 1631 aa15.38■□□□□ 0.05
PKP4-206ENST00000452162 LMTK3Q96Q04 1460 aa15.37■□□□□ 0.05
PKP4-206ENST00000452162 TET3O43151 1660 aa15.36■□□□□ 0.05
PKP4-206ENST00000452162 PPP1R15AO75807 674 aaPredicted RBP15.36■□□□□ 0.05
PKP4-206ENST00000452162 EFCAB6Q5THR3 1501 aa15.36■□□□□ 0.05
PKP4-206ENST00000452162 ARHGAP31Q2M1Z3 1444 aa15.36■□□□□ 0.05
PKP4-206ENST00000452162 UHRF1BP1Q6BDS2 1440 aa15.35■□□□□ 0.05
PKP4-206ENST00000452162 ERVK-7P63135 1459 aa15.35■□□□□ 0.05
PKP4-206ENST00000452162 ACIN1Q9UKV3 1341 aaKnown RBP15.34■□□□□ 0.05
PKP4-206ENST00000452162 TONSLQ96HA7 1378 aa15.34■□□□□ 0.05
PKP4-206ENST00000452162 SPATA31D1Q6ZQQ2 1576 aa15.34■□□□□ 0.05
PKP4-206ENST00000452162 MYO3AQ8NEV4 1616 aa15.34■□□□□ 0.05
PKP4-206ENST00000452162 TRIM52Q96A61 297 aa15.34■□□□□ 0.05
PKP4-206ENST00000452162 TNRQ92752 1358 aa15.34■□□□□ 0.05
PKP4-206ENST00000452162 E9PCH4 1651 aa15.33■□□□□ 0.04
PKP4-206ENST00000452162 HSPA2P54652 639 aa15.33■□□□□ 0.04
PKP4-206ENST00000452162 MPHOSPH9Q99550 1183 aa15.31■□□□□ 0.04
PKP4-206ENST00000452162 ZNF142P52746 1687 aaPredicted RBP15.3■□□□□ 0.04
PKP4-206ENST00000452162 CEP170BQ9Y4F5 1589 aaPredicted RBP15.3■□□□□ 0.04
PKP4-206ENST00000452162 RPRD2Q5VT52 1461 aaKnown RBP15.3■□□□□ 0.04
PKP4-206ENST00000452162 SYNMO15061 1565 aa15.28■□□□□ 0.04
PKP4-206ENST00000452162 NOS1P29475 1434 aa15.28■□□□□ 0.04
PKP4-206ENST00000452162 CENPBP07199 599 aaPredicted RBP15.28■□□□□ 0.04
PKP4-206ENST00000452162 A2ML1A8K2U0 1454 aa15.27■□□□□ 0.04
PKP4-206ENST00000452162 NLRP1Q9C000 1473 aa15.27■□□□□ 0.03
PKP4-206ENST00000452162 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
PKP4-206ENST00000452162 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
PKP4-206ENST00000452162 PKD2Q13563 968 aa15.25■□□□□ 0.03
PKP4-206ENST00000452162 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
PKP4-206ENST00000452162 IDI1Q13907 227 aa15.24■□□□□ 0.03
PKP4-206ENST00000452162 PIK3C2BO00750 1634 aa15.24■□□□□ 0.03
PKP4-206ENST00000452162 SPHKAPQ2M3C7 1700 aa15.24■□□□□ 0.03
PKP4-206ENST00000452162 UGGT1Q9NYU2 1555 aa15.23■□□□□ 0.03
PKP4-206ENST00000452162 UBR1Q8IWV7 1749 aa15.23■□□□□ 0.03
PKP4-206ENST00000452162 FOXD1Q16676 465 aa15.22■□□□□ 0.03
PKP4-206ENST00000452162 STRCQ7RTU9 1775 aa15.22■□□□□ 0.03
PKP4-206ENST00000452162 SLC52A1Q9NWF4 448 aa15.2■□□□□ 0.02
PKP4-206ENST00000452162 PTPRTO14522 1441 aa15.2■□□□□ 0.02
PKP4-206ENST00000452162 MYO5BQ9ULV0 1848 aa15.2■□□□□ 0.02
PKP4-206ENST00000452162 THEMISQ8N1K5 641 aaPredicted RBP15.19■□□□□ 0.02
PKP4-206ENST00000452162 PLA2R1Q13018 1463 aa15.19■□□□□ 0.02
PKP4-206ENST00000452162 YTHDC1Q96MU7 727 aaKnown RBP15.19■□□□□ 0.02
PKP4-206ENST00000452162 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
PKP4-206ENST00000452162 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
PKP4-206ENST00000452162 KDM5AP29375 1690 aaKnown RBP15.17■□□□□ 0.02
PKP4-206ENST00000452162 ADGRB3O60242 1522 aa15.17■□□□□ 0.02
PKP4-206ENST00000452162 TRPM2O94759 1503 aa15.17■□□□□ 0.02
PKP4-206ENST00000452162 CLTCL1P53675 1640 aa15.16■□□□□ 0.02
PKP4-206ENST00000452162 TMEM131LA2VDJ0 1609 aa15.16■□□□□ 0.02
PKP4-206ENST00000452162 POLR1AO95602 1720 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms