RNA–Protein interactions for RNA: ENST00000451850.6

AMD1-205, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 1 (best)

Gene AMD1, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-205ENST00000451850 TRIM66O15016 1216 aa9.14□□□□□ -0.95
AMD1-205ENST00000451850 KIF21AQ7Z4S6 1674 aa9.13□□□□□ -0.95
AMD1-205ENST00000451850 CEP162Q5TB80 1403 aa9.13□□□□□ -0.95
AMD1-205ENST00000451850 DHX37Q8IY37 1157 aaKnown RBP9.13□□□□□ -0.95
AMD1-205ENST00000451850 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
AMD1-205ENST00000451850 ARIH1Q9Y4X5 557 aaPredicted RBP9.13□□□□□ -0.95
AMD1-205ENST00000451850 CCDC88BA6NC98 1476 aa9.12□□□□□ -0.95
AMD1-205ENST00000451850 DSG2Q14126 1118 aa9.12□□□□□ -0.95
AMD1-205ENST00000451850 TOP2AP11388 1531 aaKnown RBP9.12□□□□□ -0.95
AMD1-205ENST00000451850 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
AMD1-205ENST00000451850 LAMC3Q9Y6N6 1575 aa9.11□□□□□ -0.95
AMD1-205ENST00000451850 FANCD2Q9BXW9 1451 aa9.11□□□□□ -0.95
AMD1-205ENST00000451850 PLEKHG3A1L390 1219 aa9.1□□□□□ -0.95
AMD1-205ENST00000451850 FAM177A1Q8N128 213 aaPredicted RBP9.09□□□□□ -0.95
AMD1-205ENST00000451850 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
AMD1-205ENST00000451850 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
AMD1-205ENST00000451850 CHRDL2Q6WN34 429 aa9.09□□□□□ -0.95
AMD1-205ENST00000451850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.09□□□□□ -0.952e-22■□□□□ 9.3
AMD1-205ENST00000451850 GRXCR2A6NFK2 248 aa9.08□□□□□ -0.96
AMD1-205ENST00000451850 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
AMD1-205ENST00000451850 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
AMD1-205ENST00000451850 CUX2O14529 1486 aa9.06□□□□□ -0.96
AMD1-205ENST00000451850 CFTRP13569 1480 aa9.06□□□□□ -0.96
AMD1-205ENST00000451850 ABCC8Q09428 1581 aa9.06□□□□□ -0.96
AMD1-205ENST00000451850 GPR37O15354 613 aa9.05□□□□□ -0.96
AMD1-205ENST00000451850 BRD2P25440 801 aaKnown RBP9.05□□□□□ -0.96
AMD1-205ENST00000451850 RSPH4AQ5TD94 716 aa9.05□□□□□ -0.96
AMD1-205ENST00000451850 SERPINA10Q9UK55 444 aa9.05□□□□□ -0.96
AMD1-205ENST00000451850 TNIKQ9UKE5 1360 aa9.05□□□□□ -0.96
AMD1-205ENST00000451850 THOC2Q8NI27 1593 aaKnown RBP9.04□□□□□ -0.96
AMD1-205ENST00000451850 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
AMD1-205ENST00000451850 PDIA6Q15084 440 aa9.04□□□□□ -0.96
AMD1-205ENST00000451850 CCDC97Q96F63 343 aaPredicted RBP9.04□□□□□ -0.96
AMD1-205ENST00000451850 MRC2Q9UBG0 1479 aa9.04□□□□□ -0.96
AMD1-205ENST00000451850 SOGA1O94964 1423 aa9.04□□□□□ -0.96
AMD1-205ENST00000451850 TTLL13PA6NNM8 815 aa9.04□□□□□ -0.96
AMD1-205ENST00000451850 FECHP22830 423 aa9.04□□□□□ -0.96
AMD1-205ENST00000451850 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
AMD1-205ENST00000451850 UPF1Q92900 1129 aaKnown RBP eCLIP9.02□□□□□ -0.977e-9■■□□□ 13.1
AMD1-205ENST00000451850 BCL11AQ9H165 835 aa9.02□□□□□ -0.97
AMD1-205ENST00000451850 CCDC102AQ96A19 550 aa9.01□□□□□ -0.97
AMD1-205ENST00000451850 TRIM35Q9UPQ4 493 aa9.01□□□□□ -0.97
AMD1-205ENST00000451850 PROSER2Q86WR7 435 aaPredicted RBP9□□□□□ -0.97
AMD1-205ENST00000451850 MICALL2Q8IY33 904 aa9□□□□□ -0.97
AMD1-205ENST00000451850 FNBP4Q8N3X1 1017 aaPredicted RBP9□□□□□ -0.97
AMD1-205ENST00000451850 POLR3GLQ9BT43 218 aa9□□□□□ -0.97
AMD1-205ENST00000451850 URB2Q14146 1524 aaKnown RBP9□□□□□ -0.97
AMD1-205ENST00000451850 MCM6Q14566 821 aa9□□□□□ -0.97
AMD1-205ENST00000451850 BMP2KQ9NSY1 1161 aaPredicted RBP8.99□□□□□ -0.97
AMD1-205ENST00000451850 PLPP6Q8IY26 295 aa8.99□□□□□ -0.97
AMD1-205ENST00000451850 DDX12PQ92771 950 aa8.99□□□□□ -0.97
AMD1-205ENST00000451850 RUSC2Q8N2Y8 1516 aa8.98□□□□□ -0.97
AMD1-205ENST00000451850 PARP9Q8IXQ6 854 aa8.98□□□□□ -0.97
AMD1-205ENST00000451850 TMC2Q8TDI7 906 aa8.98□□□□□ -0.97
AMD1-205ENST00000451850 DDRGK1Q96HY6 314 aa8.98□□□□□ -0.97
AMD1-205ENST00000451850 C2orf72A6NCS6 295 aa8.98□□□□□ -0.97
AMD1-205ENST00000451850 AMOTL2Q9Y2J4 779 aa8.98□□□□□ -0.97
AMD1-205ENST00000451850 UBE2Q2Q8WVN8 375 aa8.97□□□□□ -0.97
AMD1-205ENST00000451850 ANP32EQ9BTT0 268 aa8.97□□□□□ -0.97
AMD1-205ENST00000451850 CLSPNQ9HAW4 1339 aa8.97□□□□□ -0.97
AMD1-205ENST00000451850 FOXK1P85037 733 aa8.96□□□□□ -0.97
AMD1-205ENST00000451850 ILDR1Q86SU0 546 aaPredicted RBP8.96□□□□□ -0.97
AMD1-205ENST00000451850 SPDYE16A6NNV3 312 aaPredicted RBP8.95□□□□□ -0.98
AMD1-205ENST00000451850 GALR2O43603 387 aaPredicted RBP8.95□□□□□ -0.98
AMD1-205ENST00000451850 MAP3K9P80192 1104 aa8.95□□□□□ -0.98
AMD1-205ENST00000451850 GOLGA3Q08378 1498 aa8.95□□□□□ -0.98
AMD1-205ENST00000451850 WDR62O43379 1518 aa8.95□□□□□ -0.98
AMD1-205ENST00000451850 IRF6O14896 467 aa8.95□□□□□ -0.98
AMD1-205ENST00000451850 POM121Q96HA1 1249 aa8.95□□□□□ -0.98
AMD1-205ENST00000451850 ZNF608Q9ULD9 1512 aaPredicted RBP8.95□□□□□ -0.98
AMD1-205ENST00000451850 PRIM1P49642 420 aaKnown RBP8.94□□□□□ -0.98
AMD1-205ENST00000451850 TTLL12Q14166 644 aaPredicted RBP8.94□□□□□ -0.98
AMD1-205ENST00000451850 EEA1Q15075 1411 aa8.94□□□□□ -0.98
AMD1-205ENST00000451850 TDRD9Q8NDG6 1382 aaKnown RBP8.94□□□□□ -0.98
AMD1-205ENST00000451850 OSBPP22059 807 aa8.94□□□□□ -0.98
AMD1-205ENST00000451850 PDCD7Q8N8D1 485 aaKnown RBP8.94□□□□□ -0.98
AMD1-205ENST00000451850 MAP2K5Q13163 448 aa8.93□□□□□ -0.98
AMD1-205ENST00000451850 PLSCR2Q9NRY7 297 aa8.93□□□□□ -0.98
AMD1-205ENST00000451850 CCDC125Q86Z20 511 aa8.93□□□□□ -0.98
AMD1-205ENST00000451850 AQRO60306 1485 aaKnown RBP eCLIP8.93□□□□□ -0.984e-8■■■■■ 31
AMD1-205ENST00000451850 MINK1Q8N4C8 1332 aaPredicted RBP8.92□□□□□ -0.98
AMD1-205ENST00000451850 GOPCQ9HD26 462 aa8.92□□□□□ -0.98
AMD1-205ENST00000451850 RAD54L2Q9Y4B4 1467 aa8.92□□□□□ -0.98
AMD1-205ENST00000451850 TIE1P35590 1138 aa8.92□□□□□ -0.98
AMD1-205ENST00000451850 TOPBP1Q92547 1522 aa8.92□□□□□ -0.98
AMD1-205ENST00000451850 GNPATO15228 680 aa8.91□□□□□ -0.98
AMD1-205ENST00000451850 PPM1GO15355 546 aaPredicted RBP8.91□□□□□ -0.98
AMD1-205ENST00000451850 REPIN1Q9BWE0 567 aaKnown RBP8.91□□□□□ -0.98
AMD1-205ENST00000451850 IGSF5Q9NSI5 407 aa8.91□□□□□ -0.98
AMD1-205ENST00000451850 CLIP1P30622 1438 aa8.9□□□□□ -0.98
AMD1-205ENST00000451850 UNCXA6NJT0 531 aa8.9□□□□□ -0.98
AMD1-205ENST00000451850 MS4A1P11836 297 aa8.89□□□□□ -0.99
AMD1-205ENST00000451850 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
AMD1-205ENST00000451850 CWC22Q9HCG8 908 aaKnown RBP8.88□□□□□ -0.99
AMD1-205ENST00000451850 AMHR2Q16671 573 aa8.87□□□□□ -0.99
AMD1-205ENST00000451850 KIF3CO14782 793 aa8.87□□□□□ -0.99
AMD1-205ENST00000451850 ATN1P54259 1190 aaPredicted RBP8.87□□□□□ -0.99
AMD1-205ENST00000451850 POLA1P09884 1462 aaPredicted RBP8.87□□□□□ -0.99
AMD1-205ENST00000451850 BOLA1Q9Y3E2 137 aa8.87□□□□□ -0.99
AMD1-205ENST00000451850 VPS8Q8N3P4 1428 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms