RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 PLEKHH2Q8IVE3 1493 aa16.66■□□□□ 0.26
COL27A1-202ENST00000451716 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
COL27A1-202ENST00000451716 PLCH2O75038 1416 aa16.64■□□□□ 0.25
COL27A1-202ENST00000451716 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
COL27A1-202ENST00000451716 BCORL1Q5H9F3 1711 aa16.63■□□□□ 0.25
COL27A1-202ENST00000451716 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
COL27A1-202ENST00000451716 AFAP1Q8N556 730 aa16.62■□□□□ 0.25
COL27A1-202ENST00000451716 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
COL27A1-202ENST00000451716 TRAPPC8Q9Y2L5 1435 aa16.62■□□□□ 0.25
COL27A1-202ENST00000451716 CCDC144AA2RUR9 1427 aa16.61■□□□□ 0.25
COL27A1-202ENST00000451716 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
COL27A1-202ENST00000451716 UHRF1BP1LA0JNW5 1464 aa16.6■□□□□ 0.25
COL27A1-202ENST00000451716 KDM5CP41229 1560 aa16.6■□□□□ 0.25
COL27A1-202ENST00000451716 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
COL27A1-202ENST00000451716 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
COL27A1-202ENST00000451716 PLA2R1Q13018 1463 aa16.6■□□□□ 0.25
COL27A1-202ENST00000451716 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
COL27A1-202ENST00000451716 NEFLP07196 543 aa16.57■□□□□ 0.24
COL27A1-202ENST00000451716 NBPF1Q3BBV0 1214 aa16.57■□□□□ 0.24
COL27A1-202ENST00000451716 POLR1AO95602 1720 aaPredicted RBP16.57■□□□□ 0.24
COL27A1-202ENST00000451716 SPAG9O60271 1321 aaKnown RBP16.56■□□□□ 0.24
COL27A1-202ENST00000451716 UNC13BO14795 1591 aa16.56■□□□□ 0.24
COL27A1-202ENST00000451716 PLXNC1O60486 1568 aa16.56■□□□□ 0.24
COL27A1-202ENST00000451716 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
COL27A1-202ENST00000451716 ABCC1P33527 1531 aa16.55■□□□□ 0.24
COL27A1-202ENST00000451716 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
COL27A1-202ENST00000451716 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
COL27A1-202ENST00000451716 SENP3-EIF4A1A0A087X0R7 540 aa16.52■□□□□ 0.23
COL27A1-202ENST00000451716 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.23
COL27A1-202ENST00000451716 PRAG1Q86YV5 1406 aa16.51■□□□□ 0.23
COL27A1-202ENST00000451716 ERBINQ96RT1 1412 aa16.51■□□□□ 0.23
COL27A1-202ENST00000451716 IQGAP3Q86VI3 1631 aa16.51■□□□□ 0.23
COL27A1-202ENST00000451716 A2MP01023 1474 aa16.51■□□□□ 0.23
COL27A1-202ENST00000451716 WDR7Q9Y4E6 1490 aa16.51■□□□□ 0.23
COL27A1-202ENST00000451716 ARID4BQ4LE39 1312 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-202ENST00000451716 FANCAO15360 1455 aa16.47■□□□□ 0.23
COL27A1-202ENST00000451716 MAGI2Q86UL8 1455 aa16.46■□□□□ 0.23
COL27A1-202ENST00000451716 SCAPERQ9BY12 1400 aa16.45■□□□□ 0.22
COL27A1-202ENST00000451716 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
COL27A1-202ENST00000451716 ZFYVE16Q7Z3T8 1539 aa16.45■□□□□ 0.22
COL27A1-202ENST00000451716 ASXL2Q76L83 1435 aa16.45■□□□□ 0.22
COL27A1-202ENST00000451716 KIF3BO15066 747 aa16.44■□□□□ 0.22
COL27A1-202ENST00000451716 CCDC136Q96JN2 1154 aa16.44■□□□□ 0.22
COL27A1-202ENST00000451716 TSHZ2Q9NRE2 1034 aa16.44■□□□□ 0.22
COL27A1-202ENST00000451716 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
COL27A1-202ENST00000451716 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
COL27A1-202ENST00000451716 RTEL1-TNFRSF6BF6WH68 1400 aa16.42■□□□□ 0.22
COL27A1-202ENST00000451716 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
COL27A1-202ENST00000451716 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
COL27A1-202ENST00000451716 ATP10AO60312 1499 aa16.41■□□□□ 0.22
COL27A1-202ENST00000451716 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
COL27A1-202ENST00000451716 ARAP3Q8WWN8 1544 aa16.4■□□□□ 0.22
COL27A1-202ENST00000451716 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
COL27A1-202ENST00000451716 E9PCH4 1651 aa16.39■□□□□ 0.21
COL27A1-202ENST00000451716 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
COL27A1-202ENST00000451716 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL27A1-202ENST00000451716 TESK2Q96S53 571 aa16.39■□□□□ 0.21
COL27A1-202ENST00000451716 ATP7AQ04656 1500 aa16.39■□□□□ 0.21
COL27A1-202ENST00000451716 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
COL27A1-202ENST00000451716 ABCA9Q8IUA7 1624 aa16.39■□□□□ 0.21
COL27A1-202ENST00000451716 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
COL27A1-202ENST00000451716 PKNOX2Q96KN3 472 aa16.36■□□□□ 0.21
COL27A1-202ENST00000451716 KANK1Q14678 1352 aa16.34■□□□□ 0.21
COL27A1-202ENST00000451716 INO80Q9ULG1 1556 aaPredicted RBP16.34■□□□□ 0.21
COL27A1-202ENST00000451716 PRDM15P57071 1507 aaPredicted RBP16.34■□□□□ 0.21
COL27A1-202ENST00000451716 CC2D1BQ5T0F9 858 aaKnown RBP16.33■□□□□ 0.21
COL27A1-202ENST00000451716 MYBBP1AQ9BQG0 1328 aaKnown RBP16.33■□□□□ 0.2
COL27A1-202ENST00000451716 PER1O15534 1290 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-202ENST00000451716 PANK3Q9H999 370 aa16.32■□□□□ 0.2
COL27A1-202ENST00000451716 TMF1P82094 1093 aa16.32■□□□□ 0.2
COL27A1-202ENST00000451716 RALBP1Q15311 655 aa16.32■□□□□ 0.2
COL27A1-202ENST00000451716 COL17A1Q9UMD9 1497 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-202ENST00000451716 TRPM2O94759 1503 aa16.31■□□□□ 0.2
COL27A1-202ENST00000451716 CLTCL1P53675 1640 aa16.31■□□□□ 0.2
COL27A1-202ENST00000451716 PTPRTO14522 1441 aa16.31■□□□□ 0.2
COL27A1-202ENST00000451716 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
COL27A1-202ENST00000451716 DEPDC5O75140 1603 aa16.31■□□□□ 0.2
COL27A1-202ENST00000451716 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
COL27A1-202ENST00000451716 SPHKAPQ2M3C7 1700 aa16.3■□□□□ 0.2
COL27A1-202ENST00000451716 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
COL27A1-202ENST00000451716 CD109Q6YHK3 1445 aa16.29■□□□□ 0.2
COL27A1-202ENST00000451716 TET3O43151 1660 aa16.28■□□□□ 0.2
COL27A1-202ENST00000451716 GGT6Q6P531 493 aa16.28■□□□□ 0.2
COL27A1-202ENST00000451716 BRD4O60885 1362 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-202ENST00000451716 LAMC1P11047 1609 aa16.27■□□□□ 0.2
COL27A1-202ENST00000451716 MADDQ8WXG6 1647 aa16.27■□□□□ 0.2
COL27A1-202ENST00000451716 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.19
COL27A1-202ENST00000451716 MROH1Q8NDA8 1641 aa16.26■□□□□ 0.19
COL27A1-202ENST00000451716 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
COL27A1-202ENST00000451716 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
COL27A1-202ENST00000451716 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
COL27A1-202ENST00000451716 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
COL27A1-202ENST00000451716 RAPGEF3O95398 923 aa16.25■□□□□ 0.19
COL27A1-202ENST00000451716 CHGAP10645 457 aaKnown RBP16.25■□□□□ 0.19
COL27A1-202ENST00000451716 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
COL27A1-202ENST00000451716 CEP152O94986 1710 aa16.25■□□□□ 0.19
COL27A1-202ENST00000451716 ADGRF5Q8IZF2 1346 aa16.25■□□□□ 0.19
COL27A1-202ENST00000451716 RNF17Q9BXT8 1623 aaKnown RBP16.24■□□□□ 0.19
COL27A1-202ENST00000451716 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
COL27A1-202ENST00000451716 LRPPRCP42704 1394 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms