RNA–Protein interactions for RNA: ENST00000450294.3

LINC01828-202, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5 BASIC

Gene LINC01828, Length 955 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-202ENST00000450294 PTPN5P54829 565 aa12.46□□□□□ -0.41
LINC01828-202ENST00000450294 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
LINC01828-202ENST00000450294 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
LINC01828-202ENST00000450294 IFFO2Q5TF58 517 aa12.43□□□□□ -0.42
LINC01828-202ENST00000450294 LAPTM4BQ86VI4 370 aa12.43□□□□□ -0.42
LINC01828-202ENST00000450294 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
LINC01828-202ENST00000450294 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
LINC01828-202ENST00000450294 DPYSL4O14531 572 aa12.39□□□□□ -0.43
LINC01828-202ENST00000450294 RGS20O76081 388 aa12.39□□□□□ -0.43
LINC01828-202ENST00000450294 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
LINC01828-202ENST00000450294 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
LINC01828-202ENST00000450294 C6orf132Q5T0Z8 1188 aa12.36□□□□□ -0.43
LINC01828-202ENST00000450294 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
LINC01828-202ENST00000450294 PDIA6Q15084 440 aa12.33□□□□□ -0.44
LINC01828-202ENST00000450294 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
LINC01828-202ENST00000450294 COL9A1P20849 921 aa12.32□□□□□ -0.44
LINC01828-202ENST00000450294 TRIM6-TRIM34B2RNG4 842 aa12.3□□□□□ -0.44
LINC01828-202ENST00000450294 NBR1Q14596 966 aa12.29□□□□□ -0.44
LINC01828-202ENST00000450294 E2F4Q16254 413 aa12.29□□□□□ -0.44
LINC01828-202ENST00000450294 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
LINC01828-202ENST00000450294 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
LINC01828-202ENST00000450294 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
LINC01828-202ENST00000450294 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
LINC01828-202ENST00000450294 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
LINC01828-202ENST00000450294 DDX12PQ92771 950 aa12.28□□□□□ -0.44
LINC01828-202ENST00000450294 ZFRQ96KR1 1074 aaKnown RBP12.28□□□□□ -0.44
LINC01828-202ENST00000450294 MAP3K7O43318 606 aa12.27□□□□□ -0.45
LINC01828-202ENST00000450294 PACS2Q86VP3 889 aa12.27□□□□□ -0.45
LINC01828-202ENST00000450294 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
LINC01828-202ENST00000450294 A0A0G2JS52 829 aa12.25□□□□□ -0.45
LINC01828-202ENST00000450294 ARIH1Q9Y4X5 557 aaPredicted RBP12.25□□□□□ -0.45
LINC01828-202ENST00000450294 ITGBL1O95965 494 aaPredicted RBP12.23□□□□□ -0.45
LINC01828-202ENST00000450294 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
LINC01828-202ENST00000450294 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
LINC01828-202ENST00000450294 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
LINC01828-202ENST00000450294 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
LINC01828-202ENST00000450294 BCAMP50895 628 aa12.21□□□□□ -0.45
LINC01828-202ENST00000450294 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
LINC01828-202ENST00000450294 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
LINC01828-202ENST00000450294 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
LINC01828-202ENST00000450294 KCNC4Q03721 635 aa12.16□□□□□ -0.46
LINC01828-202ENST00000450294 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
LINC01828-202ENST00000450294 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
LINC01828-202ENST00000450294 HPS5Q9UPZ3 1129 aa12.15□□□□□ -0.46
LINC01828-202ENST00000450294 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
LINC01828-202ENST00000450294 WBP1LQ9NX94 342 aa12.14□□□□□ -0.47
LINC01828-202ENST00000450294 PRSS12P56730 875 aa12.13□□□□□ -0.47
LINC01828-202ENST00000450294 TSR1Q2NL82 804 aaKnown RBP12.13□□□□□ -0.47
LINC01828-202ENST00000450294 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
LINC01828-202ENST00000450294 IRX2Q9BZI1 471 aaPredicted RBP12.13□□□□□ -0.47
LINC01828-202ENST00000450294 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
LINC01828-202ENST00000450294 GRXCR2A6NFK2 248 aa12.12□□□□□ -0.47
LINC01828-202ENST00000450294 PPP4CP60510 307 aa12.11□□□□□ -0.47
LINC01828-202ENST00000450294 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
LINC01828-202ENST00000450294 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
LINC01828-202ENST00000450294 TATDN2Q93075 761 aa12.05□□□□□ -0.48
LINC01828-202ENST00000450294 PNMA3Q9UL41 463 aa12.05□□□□□ -0.48
LINC01828-202ENST00000450294 OSBPP22059 807 aa12.02□□□□□ -0.49
LINC01828-202ENST00000450294 SAMD7Q7Z3H4 446 aa12.02□□□□□ -0.49
LINC01828-202ENST00000450294 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
LINC01828-202ENST00000450294 SMAPO00193 183 aa11.97□□□□□ -0.49
LINC01828-202ENST00000450294 RNF40O75150 1001 aa11.97□□□□□ -0.49
LINC01828-202ENST00000450294 LAPTM4AQ15012 233 aa11.97□□□□□ -0.49
LINC01828-202ENST00000450294 SLF2Q8IX21 1173 aa11.97□□□□□ -0.49
LINC01828-202ENST00000450294 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.49
LINC01828-202ENST00000450294 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
LINC01828-202ENST00000450294 PRR14Q9BWN1 585 aa11.96□□□□□ -0.49
LINC01828-202ENST00000450294 IL21Q9HBE4 155 aa11.96□□□□□ -0.49
LINC01828-202ENST00000450294 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
LINC01828-202ENST00000450294 FAM198AQ9UFP1 575 aa11.94□□□□□ -0.5
LINC01828-202ENST00000450294 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
LINC01828-202ENST00000450294 PADI6Q6TGC4 694 aa11.91□□□□□ -0.5
LINC01828-202ENST00000450294 TTC13Q8NBP0 860 aa11.91□□□□□ -0.5
LINC01828-202ENST00000450294 GGCXP38435 758 aa11.9□□□□□ -0.5
LINC01828-202ENST00000450294 TJAP1Q5JTD0 557 aa11.9□□□□□ -0.5
LINC01828-202ENST00000450294 MTRQ99707 1265 aa11.9□□□□□ -0.5
LINC01828-202ENST00000450294 Q6ZNB5 142 aa11.86□□□□□ -0.51
LINC01828-202ENST00000450294 NPDC1Q9NQX5 325 aaPredicted RBP11.86□□□□□ -0.51
LINC01828-202ENST00000450294 SWT1Q5T5J6 900 aaKnown RBP11.85□□□□□ -0.51
LINC01828-202ENST00000450294 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
LINC01828-202ENST00000450294 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
LINC01828-202ENST00000450294 V9GY48 417 aaPredicted RBP11.84□□□□□ -0.51
LINC01828-202ENST00000450294 DNAJB2P25686 324 aa11.82□□□□□ -0.52
LINC01828-202ENST00000450294 APLP1P51693 650 aa11.82□□□□□ -0.52
LINC01828-202ENST00000450294 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
LINC01828-202ENST00000450294 C3orf80F5H4A9 247 aa11.81□□□□□ -0.52
LINC01828-202ENST00000450294 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
LINC01828-202ENST00000450294 PTGDRQ13258 359 aa11.8□□□□□ -0.52
LINC01828-202ENST00000450294 EYA1Q99502 592 aa11.8□□□□□ -0.52
LINC01828-202ENST00000450294 TMUB1Q9BVT8 246 aa11.8□□□□□ -0.52
LINC01828-202ENST00000450294 PPP1R18Q6NYC8 613 aa11.79□□□□□ -0.52
LINC01828-202ENST00000450294 PRKD2Q9BZL6 878 aa11.79□□□□□ -0.52
LINC01828-202ENST00000450294 MLLT3P42568 568 aaPredicted RBP11.78□□□□□ -0.52
LINC01828-202ENST00000450294 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
LINC01828-202ENST00000450294 PCDHB3Q9Y5E6 796 aa11.77□□□□□ -0.53
LINC01828-202ENST00000450294 NUTM2FA1L443 756 aa11.76□□□□□ -0.53
LINC01828-202ENST00000450294 FCHSD2O94868 740 aa11.76□□□□□ -0.53
LINC01828-202ENST00000450294 GFRA3O60609 400 aa11.75□□□□□ -0.53
LINC01828-202ENST00000450294 ZPR1O75312 459 aa11.74□□□□□ -0.53
LINC01828-202ENST00000450294 COPS2P61201 443 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms