RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 LMOD2Q6P5Q4 547 aa14.26□□□□□ -0.13
SHANK2-211ENST00000449833 SF3A1Q15459 793 aaKnown RBP14.25□□□□□ -0.13
SHANK2-211ENST00000449833 CHMP4AQ9BY43 222 aa14.25□□□□□ -0.13
SHANK2-211ENST00000449833 KIAA0754O94854 1291 aa14.24□□□□□ -0.13
SHANK2-211ENST00000449833 BECN2A8MW95 431 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 GIMAP7Q8NHV1 300 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 ZNF592Q92610 1267 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 IPO7O95373 1038 aaKnown RBP14.23□□□□□ -0.13
SHANK2-211ENST00000449833 HDAC5Q9UQL6 1122 aa14.23□□□□□ -0.13
SHANK2-211ENST00000449833 H3BQV1 296 aa14.22□□□□□ -0.13
SHANK2-211ENST00000449833 IFFO2Q5TF58 517 aa14.22□□□□□ -0.13
SHANK2-211ENST00000449833 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
SHANK2-211ENST00000449833 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
SHANK2-211ENST00000449833 CAVIN1Q6NZI2 390 aaKnown RBP14.22□□□□□ -0.13
SHANK2-211ENST00000449833 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
SHANK2-211ENST00000449833 MYO6Q9UM54 1294 aa14.21□□□□□ -0.13
SHANK2-211ENST00000449833 CCDC39Q9UFE4 941 aa14.21□□□□□ -0.13
SHANK2-211ENST00000449833 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
SHANK2-211ENST00000449833 DDX49Q9Y6V7 483 aaKnown RBP14.2□□□□□ -0.14
SHANK2-211ENST00000449833 DDX11Q96FC9 970 aa14.2□□□□□ -0.14
SHANK2-211ENST00000449833 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
SHANK2-211ENST00000449833 DHX8Q14562 1220 aaKnown RBP14.2□□□□□ -0.14
SHANK2-211ENST00000449833 KANK1Q14678 1352 aa14.19□□□□□ -0.14
SHANK2-211ENST00000449833 FAM107BQ9H098 131 aa14.19□□□□□ -0.14
SHANK2-211ENST00000449833 CCP110O43303 1012 aa14.19□□□□□ -0.14
SHANK2-211ENST00000449833 ANKRD20A12PQ8NF67 263 aa14.18□□□□□ -0.14
SHANK2-211ENST00000449833 CALCOCO1Q9P1Z2 691 aa14.18□□□□□ -0.14
SHANK2-211ENST00000449833 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
SHANK2-211ENST00000449833 IRX3P78415 501 aaPredicted RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 TMX4Q9H1E5 349 aaPredicted RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 PDCL2Q8N4E4 241 aa14.17□□□□□ -0.14
SHANK2-211ENST00000449833 GOLGA6L10A6NI86 522 aa14.17□□□□□ -0.14
SHANK2-211ENST00000449833 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
SHANK2-211ENST00000449833 RALBP1Q15311 655 aa14.17□□□□□ -0.14
SHANK2-211ENST00000449833 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
SHANK2-211ENST00000449833 KCNH8Q96L42 1107 aa14.16□□□□□ -0.14
SHANK2-211ENST00000449833 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
SHANK2-211ENST00000449833 PHLDB1Q86UU1 1377 aa14.16□□□□□ -0.14
SHANK2-211ENST00000449833 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
SHANK2-211ENST00000449833 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
SHANK2-211ENST00000449833 MRE11P49959 708 aa14.15□□□□□ -0.14
SHANK2-211ENST00000449833 NOL8Q76FK4 1167 aaKnown RBP14.15□□□□□ -0.15
SHANK2-211ENST00000449833 SETSIPP0DME0 302 aa14.14□□□□□ -0.15
SHANK2-211ENST00000449833 MARCH6O60337 910 aa14.14□□□□□ -0.15
SHANK2-211ENST00000449833 FAM184AQ8NB25 1140 aa14.14□□□□□ -0.15
SHANK2-211ENST00000449833 DNAJC2Q99543 621 aaKnown RBP14.14□□□□□ -0.15
SHANK2-211ENST00000449833 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
SHANK2-211ENST00000449833 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
SHANK2-211ENST00000449833 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
SHANK2-211ENST00000449833 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
SHANK2-211ENST00000449833 VPS53Q5VIR6 699 aa14.13□□□□□ -0.15
SHANK2-211ENST00000449833 EIF3JO75822 258 aaKnown RBP14.12□□□□□ -0.15
SHANK2-211ENST00000449833 FOXD4L5Q5VV16 416 aaPredicted RBP14.12□□□□□ -0.15
SHANK2-211ENST00000449833 FOXD4L4Q8WXT5 416 aaPredicted RBP14.12□□□□□ -0.15
SHANK2-211ENST00000449833 CHMP3Q9Y3E7 222 aa14.12□□□□□ -0.15
SHANK2-211ENST00000449833 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
SHANK2-211ENST00000449833 EIF3AQ14152 1382 aaKnown RBP14.11□□□□□ -0.15
SHANK2-211ENST00000449833 FAM161AQ3B820 660 aa14.11□□□□□ -0.15
SHANK2-211ENST00000449833 HDGFP51858 240 aaKnown RBP14.11□□□□□ -0.15
SHANK2-211ENST00000449833 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
SHANK2-211ENST00000449833 CENPQQ7L2Z9 268 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-211ENST00000449833 PLCD4Q9BRC7 762 aa14.1□□□□□ -0.15
SHANK2-211ENST00000449833 CCNB3Q8WWL7 1395 aa14.1□□□□□ -0.15
SHANK2-211ENST00000449833 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
SHANK2-211ENST00000449833 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-211ENST00000449833 AKAP17AQ02040 695 aaKnown RBP14.1□□□□□ -0.15
SHANK2-211ENST00000449833 PDCL3Q9H2J4 239 aa14.09□□□□□ -0.15
SHANK2-211ENST00000449833 NASPP49321 788 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-211ENST00000449833 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
SHANK2-211ENST00000449833 ROCK2O75116 1388 aaKnown RBP14.08□□□□□ -0.15
SHANK2-211ENST00000449833 PDIA4P13667 645 aaKnown RBP14.08□□□□□ -0.15
SHANK2-211ENST00000449833 SPATA24Q86W54 205 aa14.08□□□□□ -0.15
SHANK2-211ENST00000449833 CENPJQ9HC77 1338 aaPredicted RBP14.08□□□□□ -0.16
SHANK2-211ENST00000449833 RSPH4AQ5TD94 716 aa14.08□□□□□ -0.16
SHANK2-211ENST00000449833 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.08□□□□□ -0.16
SHANK2-211ENST00000449833 SOX12O15370 315 aa14.08□□□□□ -0.16
SHANK2-211ENST00000449833 U2AF1L5P0DN76 240 aaPredicted RBP14.07□□□□□ -0.16
SHANK2-211ENST00000449833 U2AF1Q01081 240 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHANK2-211ENST00000449833 CCDC47Q96A33 483 aaKnown RBP14.07□□□□□ -0.16
SHANK2-211ENST00000449833 IFT57Q9NWB7 429 aa14.07□□□□□ -0.16
SHANK2-211ENST00000449833 CCDC173Q0VFZ6 552 aa14.07□□□□□ -0.16
SHANK2-211ENST00000449833 PAIP2Q9BPZ3 127 aaKnown RBP14.07□□□□□ -0.16
SHANK2-211ENST00000449833 CTR9Q6PD62 1173 aa14.07□□□□□ -0.16
SHANK2-211ENST00000449833 PDE3BQ13370 1112 aa14.07□□□□□ -0.16
SHANK2-211ENST00000449833 RNF20Q5VTR2 975 aa14.06□□□□□ -0.16
SHANK2-211ENST00000449833 MCTP1Q6DN14 999 aa14.06□□□□□ -0.16
SHANK2-211ENST00000449833 TCEAL9Q9UHQ7 104 aa14.06□□□□□ -0.16
SHANK2-211ENST00000449833 LRRFIP1Q32MZ4 808 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 NAT10Q9H0A0 1025 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 R3HCC1Q9Y3T6 440 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 ARHGAP35Q9NRY4 1499 aa14.05□□□□□ -0.16
SHANK2-211ENST00000449833 CLASRPQ8N2M8 674 aaKnown RBP14.05□□□□□ -0.16
SHANK2-211ENST00000449833 LETM1O95202 739 aaPredicted RBP14.04□□□□□ -0.16
SHANK2-211ENST00000449833 TRIM29Q14134 588 aa14.04□□□□□ -0.16
SHANK2-211ENST00000449833 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms