RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 MCCP23508 829 aa13.16□□□□□ -0.3
CTC1-202ENST00000449476 L1TD1Q5T7N2 865 aaKnown RBP13.16□□□□□ -0.3
CTC1-202ENST00000449476 PRXQ9BXM0 1461 aa13.15□□□□□ -0.3
CTC1-202ENST00000449476 CFTRP13569 1480 aa13.14□□□□□ -0.31
CTC1-202ENST00000449476 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.316e-6■■■■□ 25.1
CTC1-202ENST00000449476 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
CTC1-202ENST00000449476 MFAP1P55081 439 aaKnown RBP13.13□□□□□ -0.31
CTC1-202ENST00000449476 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
CTC1-202ENST00000449476 PDE4AP27815 886 aa13.13□□□□□ -0.31
CTC1-202ENST00000449476 FYCO1Q9BQS8 1478 aa13.12□□□□□ -0.31
CTC1-202ENST00000449476 APAF1O14727 1248 aa13.12□□□□□ -0.31
CTC1-202ENST00000449476 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
CTC1-202ENST00000449476 CENPQQ7L2Z9 268 aaPredicted RBP13.12□□□□□ -0.31
CTC1-202ENST00000449476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTC1-202ENST00000449476 CRBNQ96SW2 442 aa13.12□□□□□ -0.31
CTC1-202ENST00000449476 BCL2L13Q9BXK5 485 aa13.12□□□□□ -0.31
CTC1-202ENST00000449476 CNTLNQ9NXG0 1405 aa13.11□□□□□ -0.31
CTC1-202ENST00000449476 ANKRD50Q9ULJ7 1429 aa13.11□□□□□ -0.31
CTC1-202ENST00000449476 E9PSI1 815 aa13.11□□□□□ -0.31
CTC1-202ENST00000449476 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
CTC1-202ENST00000449476 NAP1L2Q9ULW6 460 aaPredicted RBP13.11□□□□□ -0.31
CTC1-202ENST00000449476 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
CTC1-202ENST00000449476 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
CTC1-202ENST00000449476 GZF1Q9H116 711 aaPredicted RBP13.1□□□□□ -0.31
CTC1-202ENST00000449476 STK31Q9BXU1 1019 aa13.1□□□□□ -0.31
CTC1-202ENST00000449476 GOLGA6L4A6NEF3 574 aa13.1□□□□□ -0.31
CTC1-202ENST00000449476 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
CTC1-202ENST00000449476 LMOD3Q0VAK6 560 aa13.08□□□□□ -0.32
CTC1-202ENST00000449476 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
CTC1-202ENST00000449476 EVC2Q86UK5 1308 aa13.08□□□□□ -0.32
CTC1-202ENST00000449476 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
CTC1-202ENST00000449476 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
CTC1-202ENST00000449476 COG6Q9Y2V7 657 aa13.07□□□□□ -0.32
CTC1-202ENST00000449476 TOP2BQ02880 1626 aa13.07□□□□□ -0.32
CTC1-202ENST00000449476 SLC4A10Q6U841 1118 aa13.06□□□□□ -0.32
CTC1-202ENST00000449476 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
CTC1-202ENST00000449476 HMMRO75330 724 aa13.06□□□□□ -0.32
CTC1-202ENST00000449476 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
CTC1-202ENST00000449476 FANCIQ9NVI1 1328 aa13.06□□□□□ -0.32
CTC1-202ENST00000449476 ZKSCAN2Q63HK3 967 aa13.05□□□□□ -0.32
CTC1-202ENST00000449476 CHMP4AQ9BY43 222 aa13.04□□□□□ -0.32
CTC1-202ENST00000449476 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
CTC1-202ENST00000449476 MSNP26038 577 aaKnown RBP13.04□□□□□ -0.32
CTC1-202ENST00000449476 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
CTC1-202ENST00000449476 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
CTC1-202ENST00000449476 MIA2Q96PC5 1412 aa13.04□□□□□ -0.32
CTC1-202ENST00000449476 AMPHP49418 695 aa13.04□□□□□ -0.32
CTC1-202ENST00000449476 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
CTC1-202ENST00000449476 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
CTC1-202ENST00000449476 CDK11BP21127 795 aaKnown RBP13.03□□□□□ -0.32
CTC1-202ENST00000449476 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
CTC1-202ENST00000449476 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
CTC1-202ENST00000449476 PTMSP20962 102 aa13.03□□□□□ -0.32
CTC1-202ENST00000449476 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
CTC1-202ENST00000449476 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
CTC1-202ENST00000449476 EFCAB5A4FU69 1503 aa13.01□□□□□ -0.33
CTC1-202ENST00000449476 NESP48681 1621 aa13.01□□□□□ -0.33
CTC1-202ENST00000449476 USP35Q9P2H5 1018 aa13.01□□□□□ -0.33
CTC1-202ENST00000449476 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
CTC1-202ENST00000449476 HFM1A2PYH4 1435 aa13.01□□□□□ -0.33
CTC1-202ENST00000449476 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
CTC1-202ENST00000449476 TIAM1Q13009 1591 aa13□□□□□ -0.33
CTC1-202ENST00000449476 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
CTC1-202ENST00000449476 NPHP1O15259 732 aa13□□□□□ -0.33
CTC1-202ENST00000449476 COG3Q96JB2 828 aa13□□□□□ -0.33
CTC1-202ENST00000449476 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
CTC1-202ENST00000449476 GOLGA6L3A6NEY3 463 aa12.99□□□□□ -0.33
CTC1-202ENST00000449476 ANKRD45Q5TZF3 282 aa12.99□□□□□ -0.33
CTC1-202ENST00000449476 POLA1P09884 1462 aaPredicted RBP12.98□□□□□ -0.33
CTC1-202ENST00000449476 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
CTC1-202ENST00000449476 NRDCO43847 1150 aa12.98□□□□□ -0.33
CTC1-202ENST00000449476 ADAMTS8Q9UP79 889 aa12.98□□□□□ -0.33
CTC1-202ENST00000449476 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
CTC1-202ENST00000449476 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
CTC1-202ENST00000449476 AFAP1Q8N556 730 aa12.98□□□□□ -0.33
CTC1-202ENST00000449476 HDAC5Q9UQL6 1122 aa12.98□□□□□ -0.33
CTC1-202ENST00000449476 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
CTC1-202ENST00000449476 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
CTC1-202ENST00000449476 HMGXB3Q12766 1538 aa12.97□□□□□ -0.33
CTC1-202ENST00000449476 RIPK4P57078 832 aa12.96□□□□□ -0.33
CTC1-202ENST00000449476 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
CTC1-202ENST00000449476 ZNF330Q9Y3S2 320 aaPredicted RBP12.96□□□□□ -0.33
CTC1-202ENST00000449476 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
CTC1-202ENST00000449476 EHBP1L1Q8N3D4 1523 aa12.96□□□□□ -0.33
CTC1-202ENST00000449476 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.34
CTC1-202ENST00000449476 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.34
CTC1-202ENST00000449476 CHAF1AQ13111 956 aaPredicted RBP12.95□□□□□ -0.34
CTC1-202ENST00000449476 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
CTC1-202ENST00000449476 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
CTC1-202ENST00000449476 KIAA1107Q9UPP5 1409 aa12.95□□□□□ -0.34
CTC1-202ENST00000449476 ST18O60284 1047 aa12.94□□□□□ -0.34
CTC1-202ENST00000449476 DRC7Q8IY82 874 aa12.94□□□□□ -0.34
CTC1-202ENST00000449476 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
CTC1-202ENST00000449476 TMEM132EQ6IEE7 984 aa12.94□□□□□ -0.34
CTC1-202ENST00000449476 SYAP1Q96A49 352 aaPredicted RBP12.94□□□□□ -0.34
CTC1-202ENST00000449476 GPATCH3Q96I76 525 aa12.94□□□□□ -0.34
CTC1-202ENST00000449476 PRG4Q92954 1404 aaPredicted RBP12.94□□□□□ -0.34
CTC1-202ENST00000449476 WDR97A6NE52 1622 aa12.94□□□□□ -0.34
CTC1-202ENST00000449476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
CTC1-202ENST00000449476 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms