RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 CNTLNQ9NXG0 1405 aa21.29■■□□□ 1
GTF3C3-206ENST00000448539 PTPRKQ15262 1439 aa21.27■■□□□ 1
GTF3C3-206ENST00000448539 ERBINQ96RT1 1412 aa21.27■■□□□ 1
GTF3C3-206ENST00000448539 HSPA2P54652 639 aa21.26■□□□□ 0.99
GTF3C3-206ENST00000448539 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
GTF3C3-206ENST00000448539 CEBPAP49715 358 aaPredicted RBP21.24■□□□□ 0.99
GTF3C3-206ENST00000448539 EIF2AK4Q9P2K8 1649 aaKnown RBP21.24■□□□□ 0.99
GTF3C3-206ENST00000448539 WASHC2CQ9Y4E1 1318 aa21.23■□□□□ 0.99
GTF3C3-206ENST00000448539 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
GTF3C3-206ENST00000448539 PREX1Q8TCU6 1659 aa21.2■□□□□ 0.98
GTF3C3-206ENST00000448539 ZMYM3Q14202 1370 aa21.2■□□□□ 0.98
GTF3C3-206ENST00000448539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.19■□□□□ 0.986e-8■■■■□ 21.3
GTF3C3-206ENST00000448539 KDM5DQ9BY66 1539 aa21.18■□□□□ 0.98
GTF3C3-206ENST00000448539 FAM135AQ9P2D6 1515 aa21.18■□□□□ 0.98
GTF3C3-206ENST00000448539 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
GTF3C3-206ENST00000448539 KANK1Q14678 1352 aa21.17■□□□□ 0.98
GTF3C3-206ENST00000448539 C3P01024 1663 aa21.17■□□□□ 0.98
GTF3C3-206ENST00000448539 CLTCQ00610 1675 aaKnown RBP21.17■□□□□ 0.98
GTF3C3-206ENST00000448539 MROH2AA6NES4 1674 aa21.15■□□□□ 0.98
GTF3C3-206ENST00000448539 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
GTF3C3-206ENST00000448539 UHRF1BP1Q6BDS2 1440 aa21.11■□□□□ 0.97
GTF3C3-206ENST00000448539 MROH1Q8NDA8 1641 aa21.11■□□□□ 0.97
GTF3C3-206ENST00000448539 ABCC3O15438 1527 aa21.1■□□□□ 0.97
GTF3C3-206ENST00000448539 PRDM15P57071 1507 aaPredicted RBP21.1■□□□□ 0.97
GTF3C3-206ENST00000448539 FBXO41Q8TF61 875 aa21.1■□□□□ 0.97
GTF3C3-206ENST00000448539 NPATQ14207 1427 aa21.09■□□□□ 0.97
GTF3C3-206ENST00000448539 ZC3H13Q5T200 1668 aaKnown RBP21.09■□□□□ 0.97
GTF3C3-206ENST00000448539 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.96
GTF3C3-206ENST00000448539 DEPDC5O75140 1603 aa21.07■□□□□ 0.96
GTF3C3-206ENST00000448539 PZPP20742 1482 aa21.06■□□□□ 0.96
GTF3C3-206ENST00000448539 STRCQ7RTU9 1775 aa21.05■□□□□ 0.96
GTF3C3-206ENST00000448539 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
GTF3C3-206ENST00000448539 NAIPQ13075 1403 aa21.04■□□□□ 0.96
GTF3C3-206ENST00000448539 SENP3Q9H4L4 574 aaPredicted RBP21.04■□□□□ 0.96
GTF3C3-206ENST00000448539 FBXO31Q5XUX0 539 aaPredicted RBP21.03■□□□□ 0.96
GTF3C3-206ENST00000448539 CEP152O94986 1710 aa21.03■□□□□ 0.96
GTF3C3-206ENST00000448539 NUP155O75694 1391 aa21.01■□□□□ 0.95
GTF3C3-206ENST00000448539 CAMSAP1Q5T5Y3 1602 aa21.01■□□□□ 0.95
GTF3C3-206ENST00000448539 TNRQ92752 1358 aa21.01■□□□□ 0.95
GTF3C3-206ENST00000448539 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
GTF3C3-206ENST00000448539 LMTK2Q8IWU2 1503 aa21■□□□□ 0.95
GTF3C3-206ENST00000448539 UNC13BO14795 1591 aa21■□□□□ 0.95
GTF3C3-206ENST00000448539 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
GTF3C3-206ENST00000448539 ARHGAP31Q2M1Z3 1444 aa20.99■□□□□ 0.95
GTF3C3-206ENST00000448539 TRIM52Q96A61 297 aa20.97■□□□□ 0.95
GTF3C3-206ENST00000448539 CERKQ8TCT0 537 aa20.96■□□□□ 0.95
GTF3C3-206ENST00000448539 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
GTF3C3-206ENST00000448539 ERVK-7P63135 1459 aa20.95■□□□□ 0.94
GTF3C3-206ENST00000448539 EFCAB6Q5THR3 1501 aa20.94■□□□□ 0.94
GTF3C3-206ENST00000448539 SPATA31D1Q6ZQQ2 1576 aa20.93■□□□□ 0.94
GTF3C3-206ENST00000448539 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
GTF3C3-206ENST00000448539 IQGAP3Q86VI3 1631 aa20.92■□□□□ 0.94
GTF3C3-206ENST00000448539 TET3O43151 1660 aa20.92■□□□□ 0.94
GTF3C3-206ENST00000448539 NLRP1Q9C000 1473 aa20.91■□□□□ 0.94
GTF3C3-206ENST00000448539 SETD5Q9C0A6 1442 aa20.91■□□□□ 0.94
GTF3C3-206ENST00000448539 RPRD2Q5VT52 1461 aaKnown RBP20.9■□□□□ 0.94
GTF3C3-206ENST00000448539 PTPRTO14522 1441 aa20.9■□□□□ 0.94
GTF3C3-206ENST00000448539 ACIN1Q9UKV3 1341 aaKnown RBP20.9■□□□□ 0.94
GTF3C3-206ENST00000448539 A2ML1A8K2U0 1454 aa20.89■□□□□ 0.94
GTF3C3-206ENST00000448539 CEP170BQ9Y4F5 1589 aaPredicted RBP20.89■□□□□ 0.93
GTF3C3-206ENST00000448539 CFAP65Q6ZU64 1925 aaKnown RBP20.88■□□□□ 0.93
GTF3C3-206ENST00000448539 ZNF142P52746 1687 aaPredicted RBP20.88■□□□□ 0.93
GTF3C3-206ENST00000448539 THEMISQ8N1K5 641 aaPredicted RBP20.85■□□□□ 0.93
GTF3C3-206ENST00000448539 SLC4A1APQ9BWU0 796 aaKnown RBP20.85■□□□□ 0.93
GTF3C3-206ENST00000448539 STAG3Q9UJ98 1225 aa20.85■□□□□ 0.93
GTF3C3-206ENST00000448539 NOS1P29475 1434 aa20.85■□□□□ 0.93
GTF3C3-206ENST00000448539 SLC52A1Q9NWF4 448 aa20.83■□□□□ 0.93
GTF3C3-206ENST00000448539 UGGT1Q9NYU2 1555 aa20.83■□□□□ 0.92
GTF3C3-206ENST00000448539 RAB3GAP2Q9H2M9 1393 aa20.83■□□□□ 0.92
GTF3C3-206ENST00000448539 NCKAP5LQ9HCH0 1330 aa20.81■□□□□ 0.92
GTF3C3-206ENST00000448539 E9PCH4 1651 aa20.81■□□□□ 0.92
GTF3C3-206ENST00000448539 PKD2Q13563 968 aa20.81■□□□□ 0.92
GTF3C3-206ENST00000448539 IDI1Q13907 227 aa20.81■□□□□ 0.92
GTF3C3-206ENST00000448539 LTBP4Q8N2S1 1624 aa20.79■□□□□ 0.92
GTF3C3-206ENST00000448539 SYNMO15061 1565 aa20.79■□□□□ 0.92
GTF3C3-206ENST00000448539 PLA2R1Q13018 1463 aa20.78■□□□□ 0.92
GTF3C3-206ENST00000448539 TRIM26Q12899 539 aaPredicted RBP20.77■□□□□ 0.92
GTF3C3-206ENST00000448539 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
GTF3C3-206ENST00000448539 HRCP23327 699 aa20.76■□□□□ 0.91
GTF3C3-206ENST00000448539 ANKLE2Q86XL3 938 aa20.76■□□□□ 0.91
GTF3C3-206ENST00000448539 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
GTF3C3-206ENST00000448539 PIK3C2BO00750 1634 aa20.74■□□□□ 0.91
GTF3C3-206ENST00000448539 UBR1Q8IWV7 1749 aa20.72■□□□□ 0.91
GTF3C3-206ENST00000448539 EID1Q9Y6B2 187 aa20.71■□□□□ 0.91
GTF3C3-206ENST00000448539 ADGRB3O60242 1522 aa20.7■□□□□ 0.9
GTF3C3-206ENST00000448539 FOXD1Q16676 465 aa20.7■□□□□ 0.9
GTF3C3-206ENST00000448539 ZNF335Q9H4Z2 1342 aaPredicted RBP20.7■□□□□ 0.9
GTF3C3-206ENST00000448539 SPHKAPQ2M3C7 1700 aa20.7■□□□□ 0.9
GTF3C3-206ENST00000448539 TXNDC2Q86VQ3 553 aa20.69■□□□□ 0.9
GTF3C3-206ENST00000448539 TMEM2Q9UHN6 1383 aa20.69■□□□□ 0.9
GTF3C3-206ENST00000448539 IQSEC2Q5JU85 1478 aa20.68■□□□□ 0.9
GTF3C3-206ENST00000448539 KDM5AP29375 1690 aaKnown RBP20.67■□□□□ 0.9
GTF3C3-206ENST00000448539 POLR1AO95602 1720 aaPredicted RBP20.67■□□□□ 0.9
GTF3C3-206ENST00000448539 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
GTF3C3-206ENST00000448539 TRPM2O94759 1503 aa20.67■□□□□ 0.9
GTF3C3-206ENST00000448539 SLIT1O75093 1534 aa20.66■□□□□ 0.9
GTF3C3-206ENST00000448539 ARHGAP23Q9P227 1491 aa20.65■□□□□ 0.9
GTF3C3-206ENST00000448539 NEURL4Q96JN8 1562 aa20.64■□□□□ 0.9
GTF3C3-206ENST00000448539 SCAF11Q99590 1463 aaKnown RBP20.64■□□□□ 0.89
GTF3C3-206ENST00000448539 NPHP4O75161 1426 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms