RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SHANK2Q9UPX8 1470 aa11.39□□□□□ -0.59
AC004540.1-206ENST00000448056 ABCB7O75027 752 aa11.39□□□□□ -0.59
AC004540.1-206ENST00000448056 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
AC004540.1-206ENST00000448056 ANKRD30AQ9BXX3 1397 aa11.39□□□□□ -0.59
AC004540.1-206ENST00000448056 ROCK1Q13464 1354 aa11.38□□□□□ -0.59
AC004540.1-206ENST00000448056 ATP10AO60312 1499 aa11.38□□□□□ -0.59
AC004540.1-206ENST00000448056 MAST1Q9Y2H9 1570 aa11.37□□□□□ -0.59
AC004540.1-206ENST00000448056 ATP7AQ04656 1500 aa11.37□□□□□ -0.59
AC004540.1-206ENST00000448056 ZFYVE16Q7Z3T8 1539 aa11.37□□□□□ -0.59
AC004540.1-206ENST00000448056 HECW2Q9P2P5 1572 aa11.37□□□□□ -0.59
AC004540.1-206ENST00000448056 KIDINS220Q9ULH0 1771 aa11.36□□□□□ -0.59
AC004540.1-206ENST00000448056 DHX29Q7Z478 1369 aaKnown RBP11.36□□□□□ -0.59
AC004540.1-206ENST00000448056 ADGRL2O95490 1459 aa11.36□□□□□ -0.59
AC004540.1-206ENST00000448056 INO80Q9ULG1 1556 aaPredicted RBP11.36□□□□□ -0.59
AC004540.1-206ENST00000448056 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
AC004540.1-206ENST00000448056 CROCC2H7BZ55 1655 aa11.34□□□□□ -0.59
AC004540.1-206ENST00000448056 A2MP01023 1474 aa11.34□□□□□ -0.59
AC004540.1-206ENST00000448056 DIP2CQ9Y2E4 1556 aa11.33□□□□□ -0.6
AC004540.1-206ENST00000448056 ARID4BQ4LE39 1312 aaPredicted RBP11.33□□□□□ -0.6
AC004540.1-206ENST00000448056 ABCA6Q8N139 1617 aa11.32□□□□□ -0.6
AC004540.1-206ENST00000448056 ARHGEF40Q8TER5 1519 aa11.32□□□□□ -0.6
AC004540.1-206ENST00000448056 PLXNC1O60486 1568 aa11.32□□□□□ -0.6
AC004540.1-206ENST00000448056 DUOX2Q9NRD8 1548 aa11.31□□□□□ -0.6
AC004540.1-206ENST00000448056 KIF3BO15066 747 aa11.31□□□□□ -0.6
AC004540.1-206ENST00000448056 HFM1A2PYH4 1435 aa11.3□□□□□ -0.6
AC004540.1-206ENST00000448056 NAIPQ13075 1403 aa11.3□□□□□ -0.6
AC004540.1-206ENST00000448056 ANKRD50Q9ULJ7 1429 aa11.3□□□□□ -0.6
AC004540.1-206ENST00000448056 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
AC004540.1-206ENST00000448056 REREQ9P2R6 1566 aa11.29□□□□□ -0.6
AC004540.1-206ENST00000448056 GGT6Q6P531 493 aa11.29□□□□□ -0.6
AC004540.1-206ENST00000448056 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
AC004540.1-206ENST00000448056 ADGBQ8N7X0 1667 aa11.29□□□□□ -0.6
AC004540.1-206ENST00000448056 ERBINQ96RT1 1412 aa11.28□□□□□ -0.6
AC004540.1-206ENST00000448056 MLECQ14165 292 aa11.28□□□□□ -0.6
AC004540.1-206ENST00000448056 AGLP35573 1532 aa11.28□□□□□ -0.6
AC004540.1-206ENST00000448056 SETD5Q9C0A6 1442 aa11.27□□□□□ -0.6
AC004540.1-206ENST00000448056 HRCP23327 699 aa11.26□□□□□ -0.61
AC004540.1-206ENST00000448056 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
AC004540.1-206ENST00000448056 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
AC004540.1-206ENST00000448056 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
AC004540.1-206ENST00000448056 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
AC004540.1-206ENST00000448056 WASHC2CQ9Y4E1 1318 aa11.23□□□□□ -0.61
AC004540.1-206ENST00000448056 RAB3GAP2Q9H2M9 1393 aa11.23□□□□□ -0.61
AC004540.1-206ENST00000448056 NUP155O75694 1391 aa11.22□□□□□ -0.61
AC004540.1-206ENST00000448056 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
AC004540.1-206ENST00000448056 EIF2AK4Q9P2K8 1649 aaKnown RBP11.22□□□□□ -0.61
AC004540.1-206ENST00000448056 KANK1Q14678 1352 aa11.21□□□□□ -0.61
AC004540.1-206ENST00000448056 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.61
AC004540.1-206ENST00000448056 BCORL1Q5H9F3 1711 aa11.21□□□□□ -0.62
AC004540.1-206ENST00000448056 GCC2Q8IWJ2 1684 aa11.2□□□□□ -0.62
AC004540.1-206ENST00000448056 RNF17Q9BXT8 1623 aaKnown RBP11.19□□□□□ -0.62
AC004540.1-206ENST00000448056 ZMYM3Q14202 1370 aa11.17□□□□□ -0.62
AC004540.1-206ENST00000448056 DEPDC5O75140 1603 aa11.17□□□□□ -0.62
AC004540.1-206ENST00000448056 MROH1Q8NDA8 1641 aa11.17□□□□□ -0.62
AC004540.1-206ENST00000448056 FKBP8Q14318 412 aa11.17□□□□□ -0.62
AC004540.1-206ENST00000448056 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
AC004540.1-206ENST00000448056 CNTLNQ9NXG0 1405 aa11.17□□□□□ -0.62
AC004540.1-206ENST00000448056 VWDEQ8N2E2 1590 aa11.16□□□□□ -0.62
AC004540.1-206ENST00000448056 PRDM15P57071 1507 aaPredicted RBP11.16□□□□□ -0.62
AC004540.1-206ENST00000448056 KDM5DQ9BY66 1539 aa11.16□□□□□ -0.62
AC004540.1-206ENST00000448056 CEBPAP49715 358 aaPredicted RBP11.16□□□□□ -0.62
AC004540.1-206ENST00000448056 ADAMTSL3P82987 1691 aa11.16□□□□□ -0.62
AC004540.1-206ENST00000448056 UNC13BO14795 1591 aa11.16□□□□□ -0.62
AC004540.1-206ENST00000448056 ABCC3O15438 1527 aa11.15□□□□□ -0.62
AC004540.1-206ENST00000448056 LMTK2Q8IWU2 1503 aa11.14□□□□□ -0.63
AC004540.1-206ENST00000448056 PKD2Q13563 968 aa11.14□□□□□ -0.63
AC004540.1-206ENST00000448056 FAM135AQ9P2D6 1515 aa11.14□□□□□ -0.63
AC004540.1-206ENST00000448056 PZPP20742 1482 aa11.13□□□□□ -0.63
AC004540.1-206ENST00000448056 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
AC004540.1-206ENST00000448056 ARHGAP31Q2M1Z3 1444 aa11.12□□□□□ -0.63
AC004540.1-206ENST00000448056 IQGAP3Q86VI3 1631 aa11.12□□□□□ -0.63
AC004540.1-206ENST00000448056 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
AC004540.1-206ENST00000448056 PTPRMP28827 1452 aa11.12□□□□□ -0.63
AC004540.1-206ENST00000448056 CLTCQ00610 1675 aaKnown RBP11.11□□□□□ -0.63
AC004540.1-206ENST00000448056 NPATQ14207 1427 aa11.1□□□□□ -0.63
AC004540.1-206ENST00000448056 FER1L4A9Z1Z3 1794 aa11.1□□□□□ -0.63
AC004540.1-206ENST00000448056 ZC3H13Q5T200 1668 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-206ENST00000448056 RIMS1Q86UR5 1692 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-206ENST00000448056 CEP152O94986 1710 aa11.09□□□□□ -0.63
AC004540.1-206ENST00000448056 TET3O43151 1660 aa11.08□□□□□ -0.64
AC004540.1-206ENST00000448056 RPRD2Q5VT52 1461 aaKnown RBP11.08□□□□□ -0.64
AC004540.1-206ENST00000448056 EFCAB6Q5THR3 1501 aa11.08□□□□□ -0.64
AC004540.1-206ENST00000448056 MROH2AA6NES4 1674 aa11.08□□□□□ -0.64
AC004540.1-206ENST00000448056 CAMSAP1Q5T5Y3 1602 aa11.07□□□□□ -0.64
AC004540.1-206ENST00000448056 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
AC004540.1-206ENST00000448056 DHX57Q6P158 1386 aaKnown RBP11.06□□□□□ -0.64
AC004540.1-206ENST00000448056 SLC52A1Q9NWF4 448 aa11.06□□□□□ -0.64
AC004540.1-206ENST00000448056 PTPRTO14522 1441 aa11.06□□□□□ -0.64
AC004540.1-206ENST00000448056 NOS1P29475 1434 aa11.06□□□□□ -0.64
AC004540.1-206ENST00000448056 ERVK-7P63135 1459 aa11.06□□□□□ -0.64
AC004540.1-206ENST00000448056 TNRQ92752 1358 aa11.05□□□□□ -0.64
AC004540.1-206ENST00000448056 E9PCH4 1651 aa11.05□□□□□ -0.64
AC004540.1-206ENST00000448056 C3P01024 1663 aa11.05□□□□□ -0.64
AC004540.1-206ENST00000448056 IDI1Q13907 227 aa11.05□□□□□ -0.64
AC004540.1-206ENST00000448056 PLA2R1Q13018 1463 aa11.05□□□□□ -0.64
AC004540.1-206ENST00000448056 ANKRD30BQ9BXX2 1392 aa11.04□□□□□ -0.64
AC004540.1-206ENST00000448056 SPATA31D1Q6ZQQ2 1576 aa11.03□□□□□ -0.64
AC004540.1-206ENST00000448056 CFAP65Q6ZU64 1925 aaKnown RBP11.02□□□□□ -0.65
AC004540.1-206ENST00000448056 CCER1Q8TC90 406 aaPredicted RBP11.01□□□□□ -0.65
AC004540.1-206ENST00000448056 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms