RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
TRIM4-204ENST00000447480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRIM4-204ENST00000447480 NCOA2Q15596 1464 aa10.87□□□□□ -0.67
TRIM4-204ENST00000447480 EFCAB2Q5VUJ9 269 aa10.86□□□□□ -0.67
TRIM4-204ENST00000447480 PLCH2O75038 1416 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 ARHGAP5Q13017 1502 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 CDC42BPAQ5VT25 1732 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 GALR2O43603 387 aaPredicted RBP10.85□□□□□ -0.67
TRIM4-204ENST00000447480 CLCN6P51797 869 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 RSPH4AQ5TD94 716 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 KIF12Q96FN5 646 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 ANP32EQ9BTT0 268 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 TTC37Q6PGP7 1564 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 TSPOAP1O95153 1857 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 FANCAO15360 1455 aa10.83□□□□□ -0.68
TRIM4-204ENST00000447480 GSE1Q14687 1217 aa10.83□□□□□ -0.68
TRIM4-204ENST00000447480 CFDP1Q9UEE9 299 aaPredicted RBP10.83□□□□□ -0.68
TRIM4-204ENST00000447480 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
TRIM4-204ENST00000447480 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
TRIM4-204ENST00000447480 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
TRIM4-204ENST00000447480 GPATCH8Q9UKJ3 1502 aaKnown RBP10.81□□□□□ -0.68
TRIM4-204ENST00000447480 MAP3K13O43283 966 aa10.81□□□□□ -0.68
TRIM4-204ENST00000447480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRIM4-204ENST00000447480 PYGBP11216 843 aa10.8□□□□□ -0.68
TRIM4-204ENST00000447480 TIMELESSQ9UNS1 1208 aa10.8□□□□□ -0.68
TRIM4-204ENST00000447480 SUPT16HQ9Y5B9 1047 aaKnown RBP10.8□□□□□ -0.68
TRIM4-204ENST00000447480 KIAA1107Q9UPP5 1409 aa10.8□□□□□ -0.68
TRIM4-204ENST00000447480 ADGRL1O94910 1474 aa10.79□□□□□ -0.68
TRIM4-204ENST00000447480 AKNAQ7Z591 1439 aa10.78□□□□□ -0.68
TRIM4-204ENST00000447480 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
TRIM4-204ENST00000447480 PTPN23Q9H3S7 1636 aa10.77□□□□□ -0.68
TRIM4-204ENST00000447480 FGD6Q6ZV73 1430 aa10.77□□□□□ -0.68
TRIM4-204ENST00000447480 ZNF518AQ6AHZ1 1483 aa10.77□□□□□ -0.69
TRIM4-204ENST00000447480 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
TRIM4-204ENST00000447480 PPRC1Q5VV67 1664 aaKnown RBP10.76□□□□□ -0.69
TRIM4-204ENST00000447480 DENND4BO75064 1496 aaPredicted RBP10.76□□□□□ -0.69
TRIM4-204ENST00000447480 ABCC1P33527 1531 aa10.76□□□□□ -0.69
TRIM4-204ENST00000447480 PCDHB13Q9Y5F0 798 aa10.76□□□□□ -0.69
TRIM4-204ENST00000447480 ARHGEF5Q12774 1597 aa10.76□□□□□ -0.69
TRIM4-204ENST00000447480 KDM6BO15054 1643 aa10.76□□□□□ -0.69
TRIM4-204ENST00000447480 MAGI2Q86UL8 1455 aa10.75□□□□□ -0.69
TRIM4-204ENST00000447480 TSPY4P0CV99 314 aa10.75□□□□□ -0.69
TRIM4-204ENST00000447480 TSPY10P0CW01 314 aa10.75□□□□□ -0.69
TRIM4-204ENST00000447480 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
TRIM4-204ENST00000447480 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
TRIM4-204ENST00000447480 TCOF1Q13428 1488 aaKnown RBP10.74□□□□□ -0.69
TRIM4-204ENST00000447480 DCBLD2Q96PD2 775 aa10.74□□□□□ -0.69
TRIM4-204ENST00000447480 ZNF777Q9ULD5 760 aaPredicted RBP10.74□□□□□ -0.69
TRIM4-204ENST00000447480 CCDC141Q6ZP82 1450 aa10.74□□□□□ -0.69
TRIM4-204ENST00000447480 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
TRIM4-204ENST00000447480 SCAPERQ9BY12 1400 aa10.73□□□□□ -0.69
TRIM4-204ENST00000447480 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
TRIM4-204ENST00000447480 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
TRIM4-204ENST00000447480 IFNL1Q8IU54 200 aa10.72□□□□□ -0.69
TRIM4-204ENST00000447480 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
TRIM4-204ENST00000447480 DHX57Q6P158 1386 aaKnown RBP10.72□□□□□ -0.69
TRIM4-204ENST00000447480 POGZQ7Z3K3 1410 aa10.72□□□□□ -0.69
TRIM4-204ENST00000447480 SHANK2Q9UPX8 1470 aa10.72□□□□□ -0.69
TRIM4-204ENST00000447480 RTEL1-TNFRSF6BF6WH68 1400 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.69
TRIM4-204ENST00000447480 ZMYM4Q5VZL5 1548 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 RICTORQ6R327 1708 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 SYCP2Q9BX26 1530 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 HECW2Q9P2P5 1572 aa10.7□□□□□ -0.7
TRIM4-204ENST00000447480 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
TRIM4-204ENST00000447480 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 KDM5CP41229 1560 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 MAST1Q9Y2H9 1570 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 CHRM1P11229 460 aaPredicted RBP10.69□□□□□ -0.7
TRIM4-204ENST00000447480 ERICH6BQ5W0A0 696 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 MLH3Q9UHC1 1453 aa10.68□□□□□ -0.7
TRIM4-204ENST00000447480 SPAG9O60271 1321 aaKnown RBP10.68□□□□□ -0.7
TRIM4-204ENST00000447480 CCER2I3L3R5 266 aa10.68□□□□□ -0.7
TRIM4-204ENST00000447480 ANKRD30AQ9BXX3 1397 aa10.67□□□□□ -0.7
TRIM4-204ENST00000447480 PLXNC1O60486 1568 aa10.66□□□□□ -0.7
TRIM4-204ENST00000447480 ZFYVE16Q7Z3T8 1539 aa10.66□□□□□ -0.7
TRIM4-204ENST00000447480 MBD5Q9P267 1494 aa10.66□□□□□ -0.7
TRIM4-204ENST00000447480 DAPK1P53355 1430 aa10.66□□□□□ -0.7
TRIM4-204ENST00000447480 ROCK1Q13464 1354 aa10.65□□□□□ -0.7
TRIM4-204ENST00000447480 ATP7AQ04656 1500 aa10.65□□□□□ -0.7
TRIM4-204ENST00000447480 C9orf84Q5VXU9 1444 aa10.65□□□□□ -0.7
TRIM4-204ENST00000447480 REREQ9P2R6 1566 aa10.65□□□□□ -0.71
TRIM4-204ENST00000447480 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.71
TRIM4-204ENST00000447480 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
TRIM4-204ENST00000447480 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
TRIM4-204ENST00000447480 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
TRIM4-204ENST00000447480 ATMINO43313 823 aaPredicted RBP10.63□□□□□ -0.71
TRIM4-204ENST00000447480 NEFLP07196 543 aa10.63□□□□□ -0.71
TRIM4-204ENST00000447480 HNRNPMP52272 730 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM4-204ENST00000447480 TIE1P35590 1138 aa10.62□□□□□ -0.71
TRIM4-204ENST00000447480 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
TRIM4-204ENST00000447480 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
TRIM4-204ENST00000447480 DUOX2Q9NRD8 1548 aa10.62□□□□□ -0.71
TRIM4-204ENST00000447480 EIF2AK4Q9P2K8 1649 aaKnown RBP10.62□□□□□ -0.71
TRIM4-204ENST00000447480 ATP10AO60312 1499 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms