RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 KCNK17Q96T54 332 aa14.51□□□□□ -0.09
ATP13A3-204ENST00000446356 TESPA1A2RU30 521 aaPredicted RBP14.5□□□□□ -0.09
ATP13A3-204ENST00000446356 EN1Q05925 392 aaPredicted RBP14.5□□□□□ -0.09
ATP13A3-204ENST00000446356 AXIN2Q9Y2T1 843 aa14.48□□□□□ -0.09
ATP13A3-204ENST00000446356 OSBPP22059 807 aa14.47□□□□□ -0.09
ATP13A3-204ENST00000446356 KRTAP3-3Q9BYR6 98 aa14.45□□□□□ -0.1
ATP13A3-204ENST00000446356 KRTAP3-2Q9BYR7 98 aa14.45□□□□□ -0.1
ATP13A3-204ENST00000446356 PSEN2P49810 448 aa14.44□□□□□ -0.1
ATP13A3-204ENST00000446356 C6orf132Q5T0Z8 1188 aa14.44□□□□□ -0.1
ATP13A3-204ENST00000446356 LSM11P83369 360 aaKnown RBP eCLIP14.43□□□□□ -0.1
ATP13A3-204ENST00000446356 PPP1R3GB7ZBB8 358 aa14.42□□□□□ -0.1
ATP13A3-204ENST00000446356 POTEEQ6S8J3 1075 aa14.42□□□□□ -0.1
ATP13A3-204ENST00000446356 TSR1Q2NL82 804 aaKnown RBP14.39□□□□□ -0.11
ATP13A3-204ENST00000446356 ANKRD13DQ6ZTN6 518 aa14.39□□□□□ -0.11
ATP13A3-204ENST00000446356 BCANQ96GW7 911 aa14.39□□□□□ -0.11
ATP13A3-204ENST00000446356 PRIM1P49642 420 aaKnown RBP14.37□□□□□ -0.11
ATP13A3-204ENST00000446356 CERKQ8TCT0 537 aa14.37□□□□□ -0.11
ATP13A3-204ENST00000446356 NUTM2FA1L443 756 aa14.36□□□□□ -0.11
ATP13A3-204ENST00000446356 DMRTA1Q5VZB9 504 aa14.36□□□□□ -0.11
ATP13A3-204ENST00000446356 TK2O00142 265 aa14.34□□□□□ -0.11
ATP13A3-204ENST00000446356 COL9A1P20849 921 aa14.34□□□□□ -0.11
ATP13A3-204ENST00000446356 RBM26Q5T8P6 1007 aaKnown RBP14.33□□□□□ -0.12
ATP13A3-204ENST00000446356 CDHR5Q9HBB8 845 aa14.33□□□□□ -0.12
ATP13A3-204ENST00000446356 ADGRD1Q6QNK2 874 aa14.32□□□□□ -0.12
ATP13A3-204ENST00000446356 ZBED2Q9BTP6 218 aa14.32□□□□□ -0.12
ATP13A3-204ENST00000446356 SLC4A5Q9BY07 1137 aa14.31□□□□□ -0.12
ATP13A3-204ENST00000446356 STAC3Q96MF2 364 aa14.29□□□□□ -0.12
ATP13A3-204ENST00000446356 GPIHBP1Q8IV16 184 aa14.28□□□□□ -0.12
ATP13A3-204ENST00000446356 VPS9D1Q9Y2B5 631 aa14.28□□□□□ -0.12
ATP13A3-204ENST00000446356 FCHSD2O94868 740 aa14.27□□□□□ -0.13
ATP13A3-204ENST00000446356 PROX2Q3B8N5 592 aa14.26□□□□□ -0.13
ATP13A3-204ENST00000446356 PTGDRQ13258 359 aa14.25□□□□□ -0.13
ATP13A3-204ENST00000446356 TRIM6-TRIM34B2RNG4 842 aa14.24□□□□□ -0.13
ATP13A3-204ENST00000446356 PRSS12P56730 875 aa14.24□□□□□ -0.13
ATP13A3-204ENST00000446356 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
ATP13A3-204ENST00000446356 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
ATP13A3-204ENST00000446356 NBPF3Q9H094 633 aa14.24□□□□□ -0.13
ATP13A3-204ENST00000446356 RBM27Q9P2N5 1060 aaKnown RBP14.24□□□□□ -0.13
ATP13A3-204ENST00000446356 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.23□□□□□ -0.13
ATP13A3-204ENST00000446356 ONECUT3O60422 494 aaPredicted RBP14.22□□□□□ -0.13
ATP13A3-204ENST00000446356 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
ATP13A3-204ENST00000446356 NPDC1Q9NQX5 325 aaPredicted RBP14.22□□□□□ -0.13
ATP13A3-204ENST00000446356 RABGEF1Q9UJ41 708 aa14.22□□□□□ -0.13
ATP13A3-204ENST00000446356 HIC1Q14526 733 aa14.2□□□□□ -0.14
ATP13A3-204ENST00000446356 KIAA1468Q9P260 1216 aa14.19□□□□□ -0.14
ATP13A3-204ENST00000446356 PADI6Q6TGC4 694 aa14.18□□□□□ -0.14
ATP13A3-204ENST00000446356 MRPL50Q8N5N7 158 aaKnown RBP14.18□□□□□ -0.14
ATP13A3-204ENST00000446356 NBPF26B4DH59 902 aa14.17□□□□□ -0.14
ATP13A3-204ENST00000446356 HRO43593 1189 aa14.17□□□□□ -0.14
ATP13A3-204ENST00000446356 TSKSQ9UJT2 592 aa14.17□□□□□ -0.14
ATP13A3-204ENST00000446356 GNPATO15228 680 aa14.15□□□□□ -0.14
ATP13A3-204ENST00000446356 MYT1LQ9UL68 1186 aa14.15□□□□□ -0.14
ATP13A3-204ENST00000446356 GOLGA8CPA6NN73 597 aa14.14□□□□□ -0.15
ATP13A3-204ENST00000446356 BHMG1C9JSJ3 638 aaPredicted RBP14.13□□□□□ -0.15
ATP13A3-204ENST00000446356 GPR37O15354 613 aa14.12□□□□□ -0.15
ATP13A3-204ENST00000446356 LAPTM4BQ86VI4 370 aa14.11□□□□□ -0.15
ATP13A3-204ENST00000446356 TTC13Q8NBP0 860 aa14.11□□□□□ -0.15
ATP13A3-204ENST00000446356 PNMA3Q9UL41 463 aa14.11□□□□□ -0.15
ATP13A3-204ENST00000446356 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
ATP13A3-204ENST00000446356 TATDN2Q93075 761 aa14.09□□□□□ -0.15
ATP13A3-204ENST00000446356 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
ATP13A3-204ENST00000446356 FAM98CQ17RN3 349 aaKnown RBP14.08□□□□□ -0.16
ATP13A3-204ENST00000446356 NUDT18Q6ZVK8 323 aa14.07□□□□□ -0.16
ATP13A3-204ENST00000446356 RNF166Q96A37 237 aaPredicted RBP14.06□□□□□ -0.16
ATP13A3-204ENST00000446356 RBM46Q8TBY0 533 aaKnown RBP14.05□□□□□ -0.16
ATP13A3-204ENST00000446356 SMAPO00193 183 aa14.04□□□□□ -0.16
ATP13A3-204ENST00000446356 FECHP22830 423 aa14.03□□□□□ -0.16
ATP13A3-204ENST00000446356 ANKK1Q8NFD2 765 aa14.03□□□□□ -0.16
ATP13A3-204ENST00000446356 ZC3H15Q8WU90 426 aaKnown RBP14.03□□□□□ -0.16
ATP13A3-204ENST00000446356 ADGRG1Q9Y653 693 aa14.03□□□□□ -0.16
ATP13A3-204ENST00000446356 OATP04181 439 aa14.02□□□□□ -0.17
ATP13A3-204ENST00000446356 WNT2BQ93097 391 aa14.02□□□□□ -0.17
ATP13A3-204ENST00000446356 HDGFP51858 240 aaKnown RBP14.01□□□□□ -0.17
ATP13A3-204ENST00000446356 MAP2K5Q13163 448 aa14.01□□□□□ -0.17
ATP13A3-204ENST00000446356 KCTD12Q96CX2 325 aaKnown RBP14.01□□□□□ -0.17
ATP13A3-204ENST00000446356 ZFRQ96KR1 1074 aaKnown RBP14.01□□□□□ -0.17
ATP13A3-204ENST00000446356 C3orf80F5H4A9 247 aa13.99□□□□□ -0.17
ATP13A3-204ENST00000446356 KRI1Q8N9T8 703 aaKnown RBP13.99□□□□□ -0.17
ATP13A3-204ENST00000446356 FAM161AQ3B820 660 aa13.98□□□□□ -0.17
ATP13A3-204ENST00000446356 EYA1Q99502 592 aa13.97□□□□□ -0.17
ATP13A3-204ENST00000446356 MINK1Q8N4C8 1332 aaPredicted RBP13.96□□□□□ -0.17
ATP13A3-204ENST00000446356 ZMYND10O75800 440 aa13.96□□□□□ -0.17
ATP13A3-204ENST00000446356 LRCH3Q96II8 777 aa13.96□□□□□ -0.17
ATP13A3-204ENST00000446356 DNAJB2P25686 324 aa13.95□□□□□ -0.18
ATP13A3-204ENST00000446356 SLC4A3P48751 1232 aa13.95□□□□□ -0.18
ATP13A3-204ENST00000446356 METTL3Q86U44 580 aaKnown RBP13.95□□□□□ -0.18
ATP13A3-204ENST00000446356 BARGINQ6ZT62 677 aa13.94□□□□□ -0.18
ATP13A3-204ENST00000446356 PXYLP1Q8TE99 480 aa13.94□□□□□ -0.18
ATP13A3-204ENST00000446356 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.94□□□□□ -0.18
ATP13A3-204ENST00000446356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.93□□□□□ -0.18
ATP13A3-204ENST00000446356 IRF6O14896 467 aa13.93□□□□□ -0.18
ATP13A3-204ENST00000446356 THSD4Q6ZMP0 1018 aa13.92□□□□□ -0.18
ATP13A3-204ENST00000446356 SAMD7Q7Z3H4 446 aa13.92□□□□□ -0.18
ATP13A3-204ENST00000446356 RCCD1A6NED2 376 aa13.91□□□□□ -0.18
ATP13A3-204ENST00000446356 SOWAHBA6NEL2 793 aa13.91□□□□□ -0.18
ATP13A3-204ENST00000446356 RNF40O75150 1001 aa13.9□□□□□ -0.18
ATP13A3-204ENST00000446356 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
ATP13A3-204ENST00000446356 BCAMP50895 628 aa13.89□□□□□ -0.19
ATP13A3-204ENST00000446356 HCSTQ9UBK5 93 aa13.89□□□□□ -0.19
ATP13A3-204ENST00000446356 PTPN5P54829 565 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms