RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 WDR70Q9NW82 654 aa8.56□□□□□ -1.04
HMGB1P18-201ENST00000438801 DDX12PQ92771 950 aa8.55□□□□□ -1.04
HMGB1P18-201ENST00000438801 COL9A1P20849 921 aa8.54□□□□□ -1.04
HMGB1P18-201ENST00000438801 PDIA6Q15084 440 aa8.54□□□□□ -1.04
HMGB1P18-201ENST00000438801 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
HMGB1P18-201ENST00000438801 GOLGA8CPA6NN73 597 aa8.52□□□□□ -1.05
HMGB1P18-201ENST00000438801 SPDYE16A6NNV3 312 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P18-201ENST00000438801 PROX2Q3B8N5 592 aa8.52□□□□□ -1.05
HMGB1P18-201ENST00000438801 C6orf132Q5T0Z8 1188 aa8.52□□□□□ -1.05
HMGB1P18-201ENST00000438801 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.05
HMGB1P18-201ENST00000438801 NBPF3Q9H094 633 aa8.52□□□□□ -1.05
HMGB1P18-201ENST00000438801 RABGEF1Q9UJ41 708 aa8.51□□□□□ -1.05
HMGB1P18-201ENST00000438801 ARIH1Q9Y4X5 557 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P18-201ENST00000438801 NBR1Q14596 966 aa8.5□□□□□ -1.05
HMGB1P18-201ENST00000438801 PLA2G2EQ9NZK7 142 aa8.5□□□□□ -1.05
HMGB1P18-201ENST00000438801 PTPN5P54829 565 aa8.49□□□□□ -1.05
HMGB1P18-201ENST00000438801 WNT2BQ93097 391 aa8.49□□□□□ -1.05
HMGB1P18-201ENST00000438801 EN1Q05925 392 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P18-201ENST00000438801 THSD4Q6ZMP0 1018 aa8.48□□□□□ -1.05
HMGB1P18-201ENST00000438801 TSHZ2Q9NRE2 1034 aa8.48□□□□□ -1.05
HMGB1P18-201ENST00000438801 MAP3K7O43318 606 aa8.46□□□□□ -1.06
HMGB1P18-201ENST00000438801 ONECUT3O60422 494 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P18-201ENST00000438801 KIAA1468Q9P260 1216 aa8.46□□□□□ -1.06
HMGB1P18-201ENST00000438801 TSR1Q2NL82 804 aaKnown RBP8.45□□□□□ -1.06
HMGB1P18-201ENST00000438801 GRXCR2A6NFK2 248 aa8.44□□□□□ -1.06
HMGB1P18-201ENST00000438801 TRIM6-TRIM34B2RNG4 842 aa8.44□□□□□ -1.06
HMGB1P18-201ENST00000438801 LAPTM4BQ86VI4 370 aa8.44□□□□□ -1.06
HMGB1P18-201ENST00000438801 ANKK1Q8NFD2 765 aa8.42□□□□□ -1.06
HMGB1P18-201ENST00000438801 SEPT9Q9UHD8 586 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P18-201ENST00000438801 PRIM1P49642 420 aaKnown RBP8.41□□□□□ -1.06
HMGB1P18-201ENST00000438801 ZFRQ96KR1 1074 aaKnown RBP8.4□□□□□ -1.06
HMGB1P18-201ENST00000438801 OSBPP22059 807 aa8.39□□□□□ -1.07
HMGB1P18-201ENST00000438801 TSKSQ9UJT2 592 aa8.39□□□□□ -1.07
HMGB1P18-201ENST00000438801 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
HMGB1P18-201ENST00000438801 BCAMP50895 628 aa8.38□□□□□ -1.07
HMGB1P18-201ENST00000438801 FAM98CQ17RN3 349 aaKnown RBP8.38□□□□□ -1.07
HMGB1P18-201ENST00000438801 PACS2Q86VP3 889 aa8.38□□□□□ -1.07
HMGB1P18-201ENST00000438801 CERKQ8TCT0 537 aa8.38□□□□□ -1.07
HMGB1P18-201ENST00000438801 CDCA7LQ96GN5 454 aa8.38□□□□□ -1.07
HMGB1P18-201ENST00000438801 ARHGEF1Q92888 912 aaKnown RBP8.37□□□□□ -1.07
HMGB1P18-201ENST00000438801 PRSS12P56730 875 aa8.36□□□□□ -1.07
HMGB1P18-201ENST00000438801 KCNV2Q8TDN2 545 aa8.35□□□□□ -1.07
HMGB1P18-201ENST00000438801 CDHR5Q9HBB8 845 aa8.35□□□□□ -1.07
HMGB1P18-201ENST00000438801 FAM198AQ9UFP1 575 aa8.34□□□□□ -1.07
HMGB1P18-201ENST00000438801 IFFO2Q5TF58 517 aa8.33□□□□□ -1.08
HMGB1P18-201ENST00000438801 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P18-201ENST00000438801 SMAPO00193 183 aa8.32□□□□□ -1.08
HMGB1P18-201ENST00000438801 PLCB2Q00722 1185 aa8.32□□□□□ -1.08
HMGB1P18-201ENST00000438801 NYAP1Q6ZVC0 841 aa8.32□□□□□ -1.08
HMGB1P18-201ENST00000438801 LRCH3Q96II8 777 aa8.32□□□□□ -1.08
HMGB1P18-201ENST00000438801 WBP1LQ9NX94 342 aa8.32□□□□□ -1.08
HMGB1P18-201ENST00000438801 NBPF26B4DH59 902 aa8.31□□□□□ -1.08
HMGB1P18-201ENST00000438801 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P18-201ENST00000438801 RBM27Q9P2N5 1060 aaKnown RBP8.31□□□□□ -1.08
HMGB1P18-201ENST00000438801 PNMA3Q9UL41 463 aa8.31□□□□□ -1.08
HMGB1P18-201ENST00000438801 C3orf80F5H4A9 247 aa8.3□□□□□ -1.08
HMGB1P18-201ENST00000438801 TATDN2Q93075 761 aa8.3□□□□□ -1.08
HMGB1P18-201ENST00000438801 NPDC1Q9NQX5 325 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P18-201ENST00000438801 TSR3Q9UJK0 312 aaKnown RBP8.3□□□□□ -1.08
HMGB1P18-201ENST00000438801 P3H3Q8IVL6 736 aa8.29□□□□□ -1.08
HMGB1P18-201ENST00000438801 HPS5Q9UPZ3 1129 aa8.29□□□□□ -1.08
HMGB1P18-201ENST00000438801 ITGBL1O95965 494 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P18-201ENST00000438801 NUDT18Q6ZVK8 323 aa8.28□□□□□ -1.08
HMGB1P18-201ENST00000438801 SAMD7Q7Z3H4 446 aa8.27□□□□□ -1.09
HMGB1P18-201ENST00000438801 A0A0G2JS52 829 aa8.26□□□□□ -1.09
HMGB1P18-201ENST00000438801 PPP4CP60510 307 aa8.26□□□□□ -1.09
HMGB1P18-201ENST00000438801 PADI6Q6TGC4 694 aa8.26□□□□□ -1.09
HMGB1P18-201ENST00000438801 TTC13Q8NBP0 860 aa8.26□□□□□ -1.09
HMGB1P18-201ENST00000438801 HDGFP51858 240 aaKnown RBP8.23□□□□□ -1.09
HMGB1P18-201ENST00000438801 KCNC4Q03721 635 aa8.23□□□□□ -1.09
HMGB1P18-201ENST00000438801 SEMA3EO15041 775 aa8.22□□□□□ -1.09
HMGB1P18-201ENST00000438801 RGS20O76081 388 aa8.22□□□□□ -1.09
HMGB1P18-201ENST00000438801 PTGDRQ13258 359 aa8.21□□□□□ -1.1
HMGB1P18-201ENST00000438801 NUTM2FA1L443 756 aa8.2□□□□□ -1.1
HMGB1P18-201ENST00000438801 RNF40O75150 1001 aa8.2□□□□□ -1.1
HMGB1P18-201ENST00000438801 EYA1Q99502 592 aa8.2□□□□□ -1.1
HMGB1P18-201ENST00000438801 HAP1P54257 671 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P18-201ENST00000438801 SWT1Q5T5J6 900 aaKnown RBP8.18□□□□□ -1.1
HMGB1P18-201ENST00000438801 SLF2Q8IX21 1173 aa8.17□□□□□ -1.1
HMGB1P18-201ENST00000438801 TJAP1Q5JTD0 557 aa8.16□□□□□ -1.1
HMGB1P18-201ENST00000438801 APLP1P51693 650 aa8.15□□□□□ -1.1
HMGB1P18-201ENST00000438801 NECTIN2Q92692 538 aa8.15□□□□□ -1.1
HMGB1P18-201ENST00000438801 TESPA1A2RU30 521 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P18-201ENST00000438801 FCHSD2O94868 740 aa8.14□□□□□ -1.11
HMGB1P18-201ENST00000438801 SLC4A3P48751 1232 aa8.14□□□□□ -1.11
HMGB1P18-201ENST00000438801 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
HMGB1P18-201ENST00000438801 MTRQ99707 1265 aa8.14□□□□□ -1.11
HMGB1P18-201ENST00000438801 ADGRG1Q9Y653 693 aa8.14□□□□□ -1.11
HMGB1P18-201ENST00000438801 DNAJB2P25686 324 aa8.13□□□□□ -1.11
HMGB1P18-201ENST00000438801 SMYD5Q6GMV2 418 aa8.13□□□□□ -1.11
HMGB1P18-201ENST00000438801 IL21Q9HBE4 155 aa8.13□□□□□ -1.11
HMGB1P18-201ENST00000438801 FAM161AQ3B820 660 aa8.12□□□□□ -1.11
HMGB1P18-201ENST00000438801 KDM2AQ9Y2K7 1162 aa8.12□□□□□ -1.11
HMGB1P18-201ENST00000438801 RBM26Q5T8P6 1007 aaKnown RBP8.11□□□□□ -1.11
HMGB1P18-201ENST00000438801 RCCD1A6NED2 376 aa8.1□□□□□ -1.11
HMGB1P18-201ENST00000438801 HIC1Q14526 733 aa8.1□□□□□ -1.11
HMGB1P18-201ENST00000438801 TMEM134Q9H6X4 195 aa8.1□□□□□ -1.11
HMGB1P18-201ENST00000438801 ZNF516Q92618 1163 aa8.09□□□□□ -1.11
HMGB1P18-201ENST00000438801 IRX2Q9BZI1 471 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P18-201ENST00000438801 COPS2P61201 443 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms