RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 GPBP1L1Q9HC44 474 aaPredicted RBP8.67□□□□□ -1.02
NCL-204ENST00000436894 TRIM66O15016 1216 aa8.66□□□□□ -1.02
NCL-204ENST00000436894 PTGDRQ13258 359 aa8.66□□□□□ -1.02
NCL-204ENST00000436894 GNPATO15228 680 aa8.65□□□□□ -1.02
NCL-204ENST00000436894 MAP3K7O43318 606 aa8.65□□□□□ -1.02
NCL-204ENST00000436894 FCHSD2O94868 740 aa8.65□□□□□ -1.02
NCL-204ENST00000436894 GPR153Q6NV75 609 aa8.65□□□□□ -1.02
NCL-204ENST00000436894 CCDC102AQ96A19 550 aa8.65□□□□□ -1.02
NCL-204ENST00000436894 NPDC1Q9NQX5 325 aaPredicted RBP8.65□□□□□ -1.02
NCL-204ENST00000436894 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
NCL-204ENST00000436894 NESP48681 1621 aa8.63□□□□□ -1.03
NCL-204ENST00000436894 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
NCL-204ENST00000436894 HIC1Q14526 733 aa8.63□□□□□ -1.03
NCL-204ENST00000436894 TMEM132AQ24JP5 1023 aa8.63□□□□□ -1.03
NCL-204ENST00000436894 JPH4Q96JJ6 628 aa8.63□□□□□ -1.03
NCL-204ENST00000436894 EPAS1Q99814 870 aa8.63□□□□□ -1.03
NCL-204ENST00000436894 LAMC3Q9Y6N6 1575 aa8.63□□□□□ -1.03
NCL-204ENST00000436894 IRF6O14896 467 aa8.62□□□□□ -1.03
NCL-204ENST00000436894 FOSBP53539 338 aa8.62□□□□□ -1.03
NCL-204ENST00000436894 PDE4DQ08499 809 aa8.62□□□□□ -1.03
NCL-204ENST00000436894 TYW1BQ6NUM6 668 aa8.62□□□□□ -1.03
NCL-204ENST00000436894 MAMSTRQ6ZN01 415 aa8.62□□□□□ -1.03
NCL-204ENST00000436894 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
NCL-204ENST00000436894 PDS5BQ9NTI5 1447 aa8.62□□□□□ -1.03
NCL-204ENST00000436894 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
NCL-204ENST00000436894 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
NCL-204ENST00000436894 ZNF710Q8N1W2 664 aa8.61□□□□□ -1.03
NCL-204ENST00000436894 OTUD5Q96G74 571 aa8.61□□□□□ -1.03
NCL-204ENST00000436894 SMARCA4P51532 1647 aa8.61□□□□□ -1.03
NCL-204ENST00000436894 BAZ1BQ9UIG0 1483 aaKnown RBP8.6□□□□□ -1.03
NCL-204ENST00000436894 LHX6Q9UPM6 363 aa8.6□□□□□ -1.03
NCL-204ENST00000436894 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
NCL-204ENST00000436894 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
NCL-204ENST00000436894 KDM4CQ9H3R0 1056 aa8.59□□□□□ -1.03
NCL-204ENST00000436894 FAM161AQ3B820 660 aa8.58□□□□□ -1.04
NCL-204ENST00000436894 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
NCL-204ENST00000436894 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
NCL-204ENST00000436894 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
NCL-204ENST00000436894 BAZ1AQ9NRL2 1556 aaPredicted RBP8.57□□□□□ -1.04
NCL-204ENST00000436894 FBXW7Q969H0 707 aa8.57□□□□□ -1.04
NCL-204ENST00000436894 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
NCL-204ENST00000436894 IL27Q8NEV9 243 aa8.56□□□□□ -1.04
NCL-204ENST00000436894 GTF3C3Q9Y5Q9 886 aa8.55□□□□□ -1.04
NCL-204ENST00000436894 PARP9Q8IXQ6 854 aa8.54□□□□□ -1.04
NCL-204ENST00000436894 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
NCL-204ENST00000436894 AMHR2Q16671 573 aa8.53□□□□□ -1.04
NCL-204ENST00000436894 PADI6Q6TGC4 694 aa8.53□□□□□ -1.04
NCL-204ENST00000436894 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
NCL-204ENST00000436894 KIF21AQ7Z4S6 1674 aa8.53□□□□□ -1.04
NCL-204ENST00000436894 HOXB1P14653 301 aaPredicted RBP8.52□□□□□ -1.05
NCL-204ENST00000436894 COL9A1P20849 921 aa8.52□□□□□ -1.05
NCL-204ENST00000436894 NLRP7Q8WX94 980 aa8.52□□□□□ -1.05
NCL-204ENST00000436894 FAM117AQ9C073 453 aa8.52□□□□□ -1.05
NCL-204ENST00000436894 CADPSQ9ULU8 1353 aa8.5□□□□□ -1.05
NCL-204ENST00000436894 TTLL12Q14166 644 aaPredicted RBP8.5□□□□□ -1.05
NCL-204ENST00000436894 MRC2Q9UBG0 1479 aa8.5□□□□□ -1.05
NCL-204ENST00000436894 SNPHO15079 494 aa8.49□□□□□ -1.05
NCL-204ENST00000436894 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
NCL-204ENST00000436894 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
NCL-204ENST00000436894 CDCA7LQ96GN5 454 aa8.48□□□□□ -1.05
NCL-204ENST00000436894 TIMELESSQ9UNS1 1208 aa8.48□□□□□ -1.05
NCL-204ENST00000436894 ADGRG1Q9Y653 693 aa8.48□□□□□ -1.05
NCL-204ENST00000436894 WDR62O43379 1518 aa8.48□□□□□ -1.05
NCL-204ENST00000436894 PLEKHG3A1L390 1219 aa8.47□□□□□ -1.05
NCL-204ENST00000436894 C3orf80F5H4A9 247 aa8.47□□□□□ -1.05
NCL-204ENST00000436894 MS4A1P11836 297 aa8.47□□□□□ -1.05
NCL-204ENST00000436894 PRSS12P56730 875 aa8.47□□□□□ -1.05
NCL-204ENST00000436894 MDM2Q00987 491 aaPredicted RBP8.47□□□□□ -1.05
NCL-204ENST00000436894 GIGYF2Q6Y7W6 1299 aaKnown RBP8.47□□□□□ -1.05
NCL-204ENST00000436894 METTL3Q86U44 580 aaKnown RBP8.47□□□□□ -1.05
NCL-204ENST00000436894 TTC13Q8NBP0 860 aa8.47□□□□□ -1.05
NCL-204ENST00000436894 BCL2L12Q9HB09 334 aa8.47□□□□□ -1.05
NCL-204ENST00000436894 CERKQ8TCT0 537 aa8.46□□□□□ -1.06
NCL-204ENST00000436894 TSKSQ9UJT2 592 aa8.45□□□□□ -1.06
NCL-204ENST00000436894 PTPREP23469 700 aa8.44□□□□□ -1.06
NCL-204ENST00000436894 PXYLP1Q8TE99 480 aa8.44□□□□□ -1.06
NCL-204ENST00000436894 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
NCL-204ENST00000436894 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
NCL-204ENST00000436894 PSDA5PKW4 1024 aaPredicted RBP8.43□□□□□ -1.06
NCL-204ENST00000436894 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
NCL-204ENST00000436894 KCNK17Q96T54 332 aa8.43□□□□□ -1.06
NCL-204ENST00000436894 ST18O60284 1047 aa8.42□□□□□ -1.06
NCL-204ENST00000436894 OATP04181 439 aa8.42□□□□□ -1.06
NCL-204ENST00000436894 PROX2Q3B8N5 592 aa8.42□□□□□ -1.06
NCL-204ENST00000436894 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
NCL-204ENST00000436894 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
NCL-204ENST00000436894 RBM27Q9P2N5 1060 aaKnown RBP8.42□□□□□ -1.06
NCL-204ENST00000436894 CEP164Q9UPV0 1460 aa8.42□□□□□ -1.06
NCL-204ENST00000436894 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
NCL-204ENST00000436894 CLCN1P35523 988 aa8.41□□□□□ -1.06
NCL-204ENST00000436894 PSEN2P49810 448 aa8.41□□□□□ -1.06
NCL-204ENST00000436894 VARS2Q5ST30 1063 aaKnown RBP8.41□□□□□ -1.06
NCL-204ENST00000436894 POTEEQ6S8J3 1075 aa8.41□□□□□ -1.06
NCL-204ENST00000436894 AXIN2Q9Y2T1 843 aa8.4□□□□□ -1.06
NCL-204ENST00000436894 ERBB3P21860 1342 aa8.39□□□□□ -1.07
NCL-204ENST00000436894 SMAPO00193 183 aa8.39□□□□□ -1.07
NCL-204ENST00000436894 SSTR3P32745 418 aaPredicted RBP8.39□□□□□ -1.07
NCL-204ENST00000436894 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
NCL-204ENST00000436894 DDRGK1Q96HY6 314 aa8.39□□□□□ -1.07
NCL-204ENST00000436894 FANCD2Q9BXW9 1451 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms