RNA–Protein interactions for RNA: ENST00000435883.1

AC003958.1-201, humanhuman

BASIC

Gene AC003958.1, Length 421 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003958.1-201ENST00000435883 TRAPPC8Q9Y2L5 1435 aa18.55■□□□□ 0.56
AC003958.1-201ENST00000435883 CDC42BPAQ5VT25 1732 aa18.54■□□□□ 0.56
AC003958.1-201ENST00000435883 RPRD2Q5VT52 1461 aaKnown RBP18.54■□□□□ 0.56
AC003958.1-201ENST00000435883 CEBPAP49715 358 aaPredicted RBP18.54■□□□□ 0.56
AC003958.1-201ENST00000435883 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
AC003958.1-201ENST00000435883 C3P01024 1663 aa18.53■□□□□ 0.56
AC003958.1-201ENST00000435883 AGLP35573 1532 aa18.53■□□□□ 0.56
AC003958.1-201ENST00000435883 KIDINS220Q9ULH0 1771 aa18.53■□□□□ 0.56
AC003958.1-201ENST00000435883 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
AC003958.1-201ENST00000435883 RRP7BPQ9NSQ0 103 aa18.52■□□□□ 0.56
AC003958.1-201ENST00000435883 ADGBQ8N7X0 1667 aa18.51■□□□□ 0.55
AC003958.1-201ENST00000435883 NCOA1Q15788 1441 aa18.51■□□□□ 0.55
AC003958.1-201ENST00000435883 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
AC003958.1-201ENST00000435883 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
AC003958.1-201ENST00000435883 ABCC5O15440 1437 aa18.49■□□□□ 0.55
AC003958.1-201ENST00000435883 SAMD9LQ8IVG5 1584 aa18.48■□□□□ 0.55
AC003958.1-201ENST00000435883 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
AC003958.1-201ENST00000435883 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
AC003958.1-201ENST00000435883 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
AC003958.1-201ENST00000435883 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
AC003958.1-201ENST00000435883 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
AC003958.1-201ENST00000435883 ADGRL2O95490 1459 aa18.46■□□□□ 0.54
AC003958.1-201ENST00000435883 ANP32EQ9BTT0 268 aa18.45■□□□□ 0.54
AC003958.1-201ENST00000435883 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
AC003958.1-201ENST00000435883 SETD1BQ9UPS6 1966 aaKnown RBP18.43■□□□□ 0.54
AC003958.1-201ENST00000435883 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
AC003958.1-201ENST00000435883 CROCC2H7BZ55 1655 aa18.42■□□□□ 0.54
AC003958.1-201ENST00000435883 L3MBTL2Q969R5 705 aa18.42■□□□□ 0.54
AC003958.1-201ENST00000435883 GPATCH8Q9UKJ3 1502 aaKnown RBP18.42■□□□□ 0.54
AC003958.1-201ENST00000435883 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
AC003958.1-201ENST00000435883 INO80Q9ULG1 1556 aaPredicted RBP18.4■□□□□ 0.54
AC003958.1-201ENST00000435883 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
AC003958.1-201ENST00000435883 MROH2AA6NES4 1674 aa18.4■□□□□ 0.54
AC003958.1-201ENST00000435883 SPATA31E1Q6ZUB1 1445 aa18.4■□□□□ 0.54
AC003958.1-201ENST00000435883 BCANQ96GW7 911 aa18.39■□□□□ 0.53
AC003958.1-201ENST00000435883 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
AC003958.1-201ENST00000435883 CAMSAP2Q08AD1 1489 aa18.38■□□□□ 0.53
AC003958.1-201ENST00000435883 PTPRTO14522 1441 aa18.37■□□□□ 0.53
AC003958.1-201ENST00000435883 MBD5Q9P267 1494 aa18.37■□□□□ 0.53
AC003958.1-201ENST00000435883 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
AC003958.1-201ENST00000435883 ATP7AQ04656 1500 aa18.37■□□□□ 0.53
AC003958.1-201ENST00000435883 LTBP4Q8N2S1 1624 aa18.37■□□□□ 0.53
AC003958.1-201ENST00000435883 PZPP20742 1482 aa18.36■□□□□ 0.53
AC003958.1-201ENST00000435883 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
AC003958.1-201ENST00000435883 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
AC003958.1-201ENST00000435883 ANKRD30AQ9BXX3 1397 aa18.34■□□□□ 0.53
AC003958.1-201ENST00000435883 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
AC003958.1-201ENST00000435883 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
AC003958.1-201ENST00000435883 NPATQ14207 1427 aa18.32■□□□□ 0.52
AC003958.1-201ENST00000435883 CLTCQ00610 1675 aaKnown RBP18.32■□□□□ 0.52
AC003958.1-201ENST00000435883 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
AC003958.1-201ENST00000435883 ROCK2O75116 1388 aaKnown RBP18.31■□□□□ 0.52
AC003958.1-201ENST00000435883 MYO3AQ8NEV4 1616 aa18.31■□□□□ 0.52
AC003958.1-201ENST00000435883 RBM19Q9Y4C8 960 aaKnown RBP18.31■□□□□ 0.52
AC003958.1-201ENST00000435883 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
AC003958.1-201ENST00000435883 CAMSAP1Q5T5Y3 1602 aa18.31■□□□□ 0.52
AC003958.1-201ENST00000435883 PPP4R2Q9NY27 417 aa18.3■□□□□ 0.52
AC003958.1-201ENST00000435883 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
AC003958.1-201ENST00000435883 ZNF777Q9ULD5 760 aaPredicted RBP18.3■□□□□ 0.52
AC003958.1-201ENST00000435883 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
AC003958.1-201ENST00000435883 SPAG9O60271 1321 aaKnown RBP18.29■□□□□ 0.52
AC003958.1-201ENST00000435883 A2MP01023 1474 aa18.29■□□□□ 0.52
AC003958.1-201ENST00000435883 PLEKHH2Q8IVE3 1493 aa18.29■□□□□ 0.52
AC003958.1-201ENST00000435883 HNRNPMP52272 730 aaKnown RBP eCLIP18.29■□□□□ 0.52
AC003958.1-201ENST00000435883 ZMYM3Q14202 1370 aa18.28■□□□□ 0.52
AC003958.1-201ENST00000435883 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.52
AC003958.1-201ENST00000435883 NBPF8Q3BBV2 869 aa18.27■□□□□ 0.52
AC003958.1-201ENST00000435883 KIF7Q2M1P5 1343 aa18.26■□□□□ 0.51
AC003958.1-201ENST00000435883 MRS2Q9HD23 443 aa18.26■□□□□ 0.51
AC003958.1-201ENST00000435883 RALGAPBQ86X10 1494 aa18.26■□□□□ 0.51
AC003958.1-201ENST00000435883 ESF1Q9H501 851 aaKnown RBP18.25■□□□□ 0.51
AC003958.1-201ENST00000435883 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
AC003958.1-201ENST00000435883 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
AC003958.1-201ENST00000435883 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
AC003958.1-201ENST00000435883 ARHGEF5Q12774 1597 aa18.24■□□□□ 0.51
AC003958.1-201ENST00000435883 ANKRD50Q9ULJ7 1429 aa18.23■□□□□ 0.51
AC003958.1-201ENST00000435883 ZNF644Q9H582 1327 aaPredicted RBP18.23■□□□□ 0.51
AC003958.1-201ENST00000435883 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
AC003958.1-201ENST00000435883 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
AC003958.1-201ENST00000435883 USP47Q96K76 1375 aa18.2■□□□□ 0.5
AC003958.1-201ENST00000435883 C11orf95C9JLR9 678 aaPredicted RBP18.2■□□□□ 0.5
AC003958.1-201ENST00000435883 FOXD1Q16676 465 aa18.19■□□□□ 0.5
AC003958.1-201ENST00000435883 SPATA31D1Q6ZQQ2 1576 aa18.19■□□□□ 0.5
AC003958.1-201ENST00000435883 DHX29Q7Z478 1369 aaKnown RBP18.18■□□□□ 0.5
AC003958.1-201ENST00000435883 ILDR2Q71H61 639 aa18.18■□□□□ 0.5
AC003958.1-201ENST00000435883 NCKAP5LQ9HCH0 1330 aa18.18■□□□□ 0.5
AC003958.1-201ENST00000435883 RSPH4AQ5TD94 716 aa18.16■□□□□ 0.5
AC003958.1-201ENST00000435883 ZNF335Q9H4Z2 1342 aaPredicted RBP18.16■□□□□ 0.5
AC003958.1-201ENST00000435883 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
AC003958.1-201ENST00000435883 RTEL1-TNFRSF6BF6WH68 1400 aa18.15■□□□□ 0.5
AC003958.1-201ENST00000435883 PKD2Q13563 968 aa18.14■□□□□ 0.49
AC003958.1-201ENST00000435883 GGT6Q6P531 493 aa18.14■□□□□ 0.49
AC003958.1-201ENST00000435883 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
AC003958.1-201ENST00000435883 A2ML1A8K2U0 1454 aa18.13■□□□□ 0.49
AC003958.1-201ENST00000435883 FAM9BQ8IZU0 186 aa18.12■□□□□ 0.49
AC003958.1-201ENST00000435883 KIF15Q9NS87 1388 aa18.12■□□□□ 0.49
AC003958.1-201ENST00000435883 CCDC141Q6ZP82 1450 aa18.12■□□□□ 0.49
AC003958.1-201ENST00000435883 CCDC184Q52MB2 194 aa18.11■□□□□ 0.49
AC003958.1-201ENST00000435883 MAST1Q9Y2H9 1570 aa18.1■□□□□ 0.49
AC003958.1-201ENST00000435883 RNF123Q5XPI4 1314 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms