RNA–Protein interactions for RNA: ENST00000435451.1

ABCA13-203, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 3

Gene ABCA13, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-203ENST00000435451 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
ABCA13-203ENST00000435451 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
ABCA13-203ENST00000435451 KCNV2Q8TDN2 545 aa11.25□□□□□ -0.61
ABCA13-203ENST00000435451 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
ABCA13-203ENST00000435451 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
ABCA13-203ENST00000435451 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
ABCA13-203ENST00000435451 C6orf132Q5T0Z8 1188 aa11.23□□□□□ -0.61
ABCA13-203ENST00000435451 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
ABCA13-203ENST00000435451 NBR1Q14596 966 aa11.21□□□□□ -0.61
ABCA13-203ENST00000435451 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
ABCA13-203ENST00000435451 COL9A1P20849 921 aa11.2□□□□□ -0.62
ABCA13-203ENST00000435451 EN1Q05925 392 aaPredicted RBP11.2□□□□□ -0.62
ABCA13-203ENST00000435451 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
ABCA13-203ENST00000435451 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
ABCA13-203ENST00000435451 RBM33Q96EV2 1170 aaKnown RBP11.19□□□□□ -0.62
ABCA13-203ENST00000435451 OSBPP22059 807 aa11.17□□□□□ -0.62
ABCA13-203ENST00000435451 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
ABCA13-203ENST00000435451 MAP3K7O43318 606 aa11.15□□□□□ -0.62
ABCA13-203ENST00000435451 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
ABCA13-203ENST00000435451 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
ABCA13-203ENST00000435451 TSR1Q2NL82 804 aaKnown RBP11.14□□□□□ -0.63
ABCA13-203ENST00000435451 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
ABCA13-203ENST00000435451 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
ABCA13-203ENST00000435451 RABGEF1Q9UJ41 708 aa11.13□□□□□ -0.63
ABCA13-203ENST00000435451 ABCC9O60706 1549 aa11.13□□□□□ -0.63
ABCA13-203ENST00000435451 MLLT3P42568 568 aaPredicted RBP11.11□□□□□ -0.63
ABCA13-203ENST00000435451 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
ABCA13-203ENST00000435451 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
ABCA13-203ENST00000435451 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
ABCA13-203ENST00000435451 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
ABCA13-203ENST00000435451 CERKQ8TCT0 537 aa11.08□□□□□ -0.64
ABCA13-203ENST00000435451 KIAA1468Q9P260 1216 aa11.08□□□□□ -0.64
ABCA13-203ENST00000435451 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
ABCA13-203ENST00000435451 SEMA3EO15041 775 aa11.05□□□□□ -0.64
ABCA13-203ENST00000435451 CDHR5Q9HBB8 845 aa11.05□□□□□ -0.64
ABCA13-203ENST00000435451 HCSTQ9UBK5 93 aa11.05□□□□□ -0.64
ABCA13-203ENST00000435451 LAPTM4BQ86VI4 370 aa11.04□□□□□ -0.64
ABCA13-203ENST00000435451 NPDC1Q9NQX5 325 aaPredicted RBP11.04□□□□□ -0.64
ABCA13-203ENST00000435451 TSKSQ9UJT2 592 aa11.04□□□□□ -0.64
ABCA13-203ENST00000435451 PRSS12P56730 875 aa11.03□□□□□ -0.64
ABCA13-203ENST00000435451 CDCA7LQ96GN5 454 aa11.03□□□□□ -0.64
ABCA13-203ENST00000435451 GOLGA8CPA6NN73 597 aa11.01□□□□□ -0.65
ABCA13-203ENST00000435451 PACS2Q86VP3 889 aa11.01□□□□□ -0.65
ABCA13-203ENST00000435451 FAM198AQ9UFP1 575 aa11.01□□□□□ -0.65
ABCA13-203ENST00000435451 CCDC180Q9P1Z9 1646 aa11.01□□□□□ -0.65
ABCA13-203ENST00000435451 TESPA1A2RU30 521 aaPredicted RBP11□□□□□ -0.65
ABCA13-203ENST00000435451 WNT2BQ93097 391 aa11□□□□□ -0.65
ABCA13-203ENST00000435451 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
ABCA13-203ENST00000435451 THSD4Q6ZMP0 1018 aa10.99□□□□□ -0.65
ABCA13-203ENST00000435451 ZFRQ96KR1 1074 aaKnown RBP10.98□□□□□ -0.65
ABCA13-203ENST00000435451 SEPT9Q9UHD8 586 aaPredicted RBP10.98□□□□□ -0.65
ABCA13-203ENST00000435451 FAM98CQ17RN3 349 aaKnown RBP10.97□□□□□ -0.65
ABCA13-203ENST00000435451 TTC13Q8NBP0 860 aa10.97□□□□□ -0.65
ABCA13-203ENST00000435451 PTPN5P54829 565 aa10.95□□□□□ -0.66
ABCA13-203ENST00000435451 ANKK1Q8NFD2 765 aa10.95□□□□□ -0.66
ABCA13-203ENST00000435451 C3orf80F5H4A9 247 aa10.94□□□□□ -0.66
ABCA13-203ENST00000435451 PTGDRQ13258 359 aa10.94□□□□□ -0.66
ABCA13-203ENST00000435451 TATDN2Q93075 761 aa10.94□□□□□ -0.66
ABCA13-203ENST00000435451 SOWAHBA6NEL2 793 aa10.93□□□□□ -0.66
ABCA13-203ENST00000435451 SMYD5Q6GMV2 418 aa10.92□□□□□ -0.66
ABCA13-203ENST00000435451 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
ABCA13-203ENST00000435451 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
ABCA13-203ENST00000435451 SMAPO00193 183 aa10.91□□□□□ -0.66
ABCA13-203ENST00000435451 PNMA3Q9UL41 463 aa10.91□□□□□ -0.66
ABCA13-203ENST00000435451 NUTM2FA1L443 756 aa10.9□□□□□ -0.66
ABCA13-203ENST00000435451 BCAMP50895 628 aa10.89□□□□□ -0.67
ABCA13-203ENST00000435451 NUDT18Q6ZVK8 323 aa10.89□□□□□ -0.67
ABCA13-203ENST00000435451 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
ABCA13-203ENST00000435451 FCHSD2O94868 740 aa10.86□□□□□ -0.67
ABCA13-203ENST00000435451 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
ABCA13-203ENST00000435451 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
ABCA13-203ENST00000435451 EYA1Q99502 592 aa10.85□□□□□ -0.67
ABCA13-203ENST00000435451 PLA2G2EQ9NZK7 142 aa10.84□□□□□ -0.67
ABCA13-203ENST00000435451 NYAP1Q6ZVC0 841 aa10.83□□□□□ -0.68
ABCA13-203ENST00000435451 SAMD7Q7Z3H4 446 aa10.83□□□□□ -0.68
ABCA13-203ENST00000435451 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
ABCA13-203ENST00000435451 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
ABCA13-203ENST00000435451 HIC1Q14526 733 aa10.81□□□□□ -0.68
ABCA13-203ENST00000435451 GPR37O15354 613 aa10.8□□□□□ -0.68
ABCA13-203ENST00000435451 HPS5Q9UPZ3 1129 aa10.8□□□□□ -0.68
ABCA13-203ENST00000435451 ADGRG1Q9Y653 693 aa10.8□□□□□ -0.68
ABCA13-203ENST00000435451 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
ABCA13-203ENST00000435451 IFFO2Q5TF58 517 aa10.78□□□□□ -0.68
ABCA13-203ENST00000435451 PPP4CP60510 307 aa10.77□□□□□ -0.69
ABCA13-203ENST00000435451 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
ABCA13-203ENST00000435451 GNPATO15228 680 aa10.76□□□□□ -0.69
ABCA13-203ENST00000435451 FECHP22830 423 aa10.75□□□□□ -0.69
ABCA13-203ENST00000435451 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
ABCA13-203ENST00000435451 SWT1Q5T5J6 900 aaKnown RBP10.75□□□□□ -0.69
ABCA13-203ENST00000435451 ITGBL1O95965 494 aaPredicted RBP10.73□□□□□ -0.69
ABCA13-203ENST00000435451 DNAJB2P25686 324 aa10.73□□□□□ -0.69
ABCA13-203ENST00000435451 GPIHBP1Q8IV16 184 aa10.73□□□□□ -0.69
ABCA13-203ENST00000435451 TULP1O00294 542 aaPredicted RBP10.72□□□□□ -0.69
ABCA13-203ENST00000435451 OATP04181 439 aa10.72□□□□□ -0.69
ABCA13-203ENST00000435451 SLF2Q8IX21 1173 aa10.72□□□□□ -0.69
ABCA13-203ENST00000435451 PXYLP1Q8TE99 480 aa10.72□□□□□ -0.69
ABCA13-203ENST00000435451 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
ABCA13-203ENST00000435451 TMEM134Q9H6X4 195 aa10.71□□□□□ -0.69
ABCA13-203ENST00000435451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
ABCA13-203ENST00000435451 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms