RNA–Protein interactions for RNA: ENST00000431329.5

GAPVD1-208, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-208ENST00000431329 PLCH2O75038 1416 aa9.65□□□□□ -0.86
GAPVD1-208ENST00000431329 EFCAB2Q5VUJ9 269 aa9.65□□□□□ -0.86
GAPVD1-208ENST00000431329 PHF23Q9BUL5 403 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-208ENST00000431329 CARD11Q9BXL7 1154 aa9.65□□□□□ -0.86
GAPVD1-208ENST00000431329 ABCC1P33527 1531 aa9.65□□□□□ -0.87
GAPVD1-208ENST00000431329 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
GAPVD1-208ENST00000431329 POLR1AO95602 1720 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-208ENST00000431329 KDM5CP41229 1560 aa9.64□□□□□ -0.87
GAPVD1-208ENST00000431329 MAST1Q9Y2H9 1570 aa9.64□□□□□ -0.87
GAPVD1-208ENST00000431329 UNC13BO14795 1591 aa9.64□□□□□ -0.87
GAPVD1-208ENST00000431329 UHRF1BP1LA0JNW5 1464 aa9.64□□□□□ -0.87
GAPVD1-208ENST00000431329 PLXNC1O60486 1568 aa9.63□□□□□ -0.87
GAPVD1-208ENST00000431329 FAM9BQ8IZU0 186 aa9.63□□□□□ -0.87
GAPVD1-208ENST00000431329 CCDC144AA2RUR9 1427 aa9.63□□□□□ -0.87
GAPVD1-208ENST00000431329 RSPH4AQ5TD94 716 aa9.63□□□□□ -0.87
GAPVD1-208ENST00000431329 PLA2R1Q13018 1463 aa9.62□□□□□ -0.87
GAPVD1-208ENST00000431329 TSHZ2Q9NRE2 1034 aa9.62□□□□□ -0.87
GAPVD1-208ENST00000431329 PRKRIP1Q9H875 184 aaPredicted RBP9.62□□□□□ -0.87
GAPVD1-208ENST00000431329 SPAG9O60271 1321 aaKnown RBP9.62□□□□□ -0.87
GAPVD1-208ENST00000431329 WDR7Q9Y4E6 1490 aa9.62□□□□□ -0.87
GAPVD1-208ENST00000431329 ST20-MTHFSA0A0A6YYL1 179 aa9.61□□□□□ -0.87
GAPVD1-208ENST00000431329 NBPF1Q3BBV0 1214 aa9.61□□□□□ -0.87
GAPVD1-208ENST00000431329 DUOX2Q9NRD8 1548 aa9.61□□□□□ -0.87
GAPVD1-208ENST00000431329 RALGAPBQ86X10 1494 aa9.61□□□□□ -0.87
GAPVD1-208ENST00000431329 MRS2Q9HD23 443 aa9.61□□□□□ -0.87
GAPVD1-208ENST00000431329 ROCK2O75116 1388 aaKnown RBP9.61□□□□□ -0.87
GAPVD1-208ENST00000431329 IQGAP3Q86VI3 1631 aa9.61□□□□□ -0.87
GAPVD1-208ENST00000431329 ASXL2Q76L83 1435 aa9.6□□□□□ -0.87
GAPVD1-208ENST00000431329 FANCAO15360 1455 aa9.59□□□□□ -0.87
GAPVD1-208ENST00000431329 ZFYVE16Q7Z3T8 1539 aa9.59□□□□□ -0.87
GAPVD1-208ENST00000431329 UHRF1BP1Q6BDS2 1440 aa9.59□□□□□ -0.87
GAPVD1-208ENST00000431329 A2MP01023 1474 aa9.59□□□□□ -0.87
GAPVD1-208ENST00000431329 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
GAPVD1-208ENST00000431329 NEFLP07196 543 aa9.58□□□□□ -0.88
GAPVD1-208ENST00000431329 SCAPERQ9BY12 1400 aa9.58□□□□□ -0.88
GAPVD1-208ENST00000431329 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
GAPVD1-208ENST00000431329 ERBINQ96RT1 1412 aa9.57□□□□□ -0.88
GAPVD1-208ENST00000431329 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
GAPVD1-208ENST00000431329 E9PCH4 1651 aa9.57□□□□□ -0.88
GAPVD1-208ENST00000431329 PRAG1Q86YV5 1406 aa9.57□□□□□ -0.88
GAPVD1-208ENST00000431329 OSCARQ8IYS5 282 aa9.57□□□□□ -0.88
GAPVD1-208ENST00000431329 ABCA9Q8IUA7 1624 aa9.57□□□□□ -0.88
GAPVD1-208ENST00000431329 DHX29Q7Z478 1369 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-208ENST00000431329 KIF3BO15066 747 aa9.56□□□□□ -0.88
GAPVD1-208ENST00000431329 ATP7AQ04656 1500 aa9.56□□□□□ -0.88
GAPVD1-208ENST00000431329 MAGI2Q86UL8 1455 aa9.55□□□□□ -0.88
GAPVD1-208ENST00000431329 ARXQ96QS3 562 aa9.55□□□□□ -0.88
GAPVD1-208ENST00000431329 CFAP65Q6ZU64 1925 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-208ENST00000431329 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-208ENST00000431329 UGGT1Q9NYU2 1555 aa9.54□□□□□ -0.88
GAPVD1-208ENST00000431329 INO80Q9ULG1 1556 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-208ENST00000431329 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
GAPVD1-208ENST00000431329 ATP10AO60312 1499 aa9.52□□□□□ -0.88
GAPVD1-208ENST00000431329 SPHKAPQ2M3C7 1700 aa9.52□□□□□ -0.89
GAPVD1-208ENST00000431329 CLTCL1P53675 1640 aa9.52□□□□□ -0.89
GAPVD1-208ENST00000431329 DISP3Q9P2K9 1392 aa9.51□□□□□ -0.89
GAPVD1-208ENST00000431329 ARAP3Q8WWN8 1544 aa9.51□□□□□ -0.89
GAPVD1-208ENST00000431329 KIDINS220Q9ULH0 1771 aa9.51□□□□□ -0.89
GAPVD1-208ENST00000431329 SENP3Q9H4L4 574 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-208ENST00000431329 RTEL1-TNFRSF6BF6WH68 1400 aa9.5□□□□□ -0.89
GAPVD1-208ENST00000431329 CEP152O94986 1710 aa9.5□□□□□ -0.89
GAPVD1-208ENST00000431329 AMER1Q5JTC6 1135 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-208ENST00000431329 DEPDC5O75140 1603 aa9.5□□□□□ -0.89
GAPVD1-208ENST00000431329 MROH1Q8NDA8 1641 aa9.49□□□□□ -0.89
GAPVD1-208ENST00000431329 CD109Q6YHK3 1445 aa9.49□□□□□ -0.89
GAPVD1-208ENST00000431329 TET3O43151 1660 aa9.49□□□□□ -0.89
GAPVD1-208ENST00000431329 RAPGEF3O95398 923 aa9.48□□□□□ -0.89
GAPVD1-208ENST00000431329 GGT6Q6P531 493 aa9.48□□□□□ -0.89
GAPVD1-208ENST00000431329 TRPM2O94759 1503 aa9.48□□□□□ -0.89
GAPVD1-208ENST00000431329 PRDM15P57071 1507 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-208ENST00000431329 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-208ENST00000431329 CC2D1BQ5T0F9 858 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-208ENST00000431329 KANK1Q14678 1352 aa9.48□□□□□ -0.89
GAPVD1-208ENST00000431329 MADDQ8WXG6 1647 aa9.48□□□□□ -0.89
GAPVD1-208ENST00000431329 TESK2Q96S53 571 aa9.47□□□□□ -0.89
GAPVD1-208ENST00000431329 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-208ENST00000431329 EIF2AK4Q9P2K8 1649 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-208ENST00000431329 TMC1Q8TDI8 760 aa9.47□□□□□ -0.89
GAPVD1-208ENST00000431329 CYB5RLQ6IPT4 315 aa9.46□□□□□ -0.89
GAPVD1-208ENST00000431329 RNF17Q9BXT8 1623 aaKnown RBP9.46□□□□□ -0.89
GAPVD1-208ENST00000431329 MROH2AA6NES4 1674 aa9.46□□□□□ -0.9
GAPVD1-208ENST00000431329 PPRC1Q5VV67 1664 aaKnown RBP9.46□□□□□ -0.9
GAPVD1-208ENST00000431329 COL17A1Q9UMD9 1497 aaPredicted RBP9.46□□□□□ -0.9
GAPVD1-208ENST00000431329 GPRASP1Q5JY77 1395 aa9.46□□□□□ -0.9
GAPVD1-208ENST00000431329 ARID4BQ4LE39 1312 aaPredicted RBP9.46□□□□□ -0.9
GAPVD1-208ENST00000431329 ZNF518AQ6AHZ1 1483 aa9.45□□□□□ -0.9
GAPVD1-208ENST00000431329 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-208ENST00000431329 PANK3Q9H999 370 aa9.45□□□□□ -0.9
GAPVD1-208ENST00000431329 ZBED9Q6R2W3 1325 aa9.45□□□□□ -0.9
GAPVD1-208ENST00000431329 NUTM2DQ5VT03 806 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-208ENST00000431329 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
GAPVD1-208ENST00000431329 PTPRTO14522 1441 aa9.44□□□□□ -0.9
GAPVD1-208ENST00000431329 POGZQ7Z3K3 1410 aa9.44□□□□□ -0.9
GAPVD1-208ENST00000431329 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
GAPVD1-208ENST00000431329 ABCA6Q8N139 1617 aa9.44□□□□□ -0.9
GAPVD1-208ENST00000431329 ADGRF5Q8IZF2 1346 aa9.44□□□□□ -0.9
GAPVD1-208ENST00000431329 FRMPD1Q5SYB0 1578 aa9.43□□□□□ -0.9
GAPVD1-208ENST00000431329 LAMC1P11047 1609 aa9.43□□□□□ -0.9
GAPVD1-208ENST00000431329 IQGAP1P46940 1657 aa9.43□□□□□ -0.9
GAPVD1-208ENST00000431329 PNISRQ8TF01 805 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms