RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MLECQ14165 292 aa12.55□□□□□ -0.4
GABPB1-205ENST00000429662 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
GABPB1-205ENST00000429662 DIP2CQ9Y2E4 1556 aa12.54□□□□□ -0.4
GABPB1-205ENST00000429662 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-205ENST00000429662 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
GABPB1-205ENST00000429662 ALKQ9UM73 1620 aa12.54□□□□□ -0.4
GABPB1-205ENST00000429662 MYT1Q01538 1121 aa12.53□□□□□ -0.4
GABPB1-205ENST00000429662 ABCA6Q8N139 1617 aa12.52□□□□□ -0.41
GABPB1-205ENST00000429662 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
GABPB1-205ENST00000429662 ZNF142P52746 1687 aaPredicted RBP12.51□□□□□ -0.41
GABPB1-205ENST00000429662 CAMSAP1Q5T5Y3 1602 aa12.51□□□□□ -0.41
GABPB1-205ENST00000429662 RAB3GAP2Q9H2M9 1393 aa12.5□□□□□ -0.41
GABPB1-205ENST00000429662 FYCO1Q9BQS8 1478 aa12.5□□□□□ -0.41
GABPB1-205ENST00000429662 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
GABPB1-205ENST00000429662 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
GABPB1-205ENST00000429662 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
GABPB1-205ENST00000429662 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
GABPB1-205ENST00000429662 PLCH2O75038 1416 aa12.47□□□□□ -0.41
GABPB1-205ENST00000429662 MYO5CQ9NQX4 1742 aa12.47□□□□□ -0.41
GABPB1-205ENST00000429662 AGLP35573 1532 aa12.47□□□□□ -0.41
GABPB1-205ENST00000429662 TCOF1Q13428 1488 aaKnown RBP12.46□□□□□ -0.41
GABPB1-205ENST00000429662 FMN1Q68DA7 1419 aa12.46□□□□□ -0.41
GABPB1-205ENST00000429662 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.41
GABPB1-205ENST00000429662 MROH2AA6NES4 1674 aa12.46□□□□□ -0.42
GABPB1-205ENST00000429662 MYO3AQ8NEV4 1616 aa12.44□□□□□ -0.42
GABPB1-205ENST00000429662 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
GABPB1-205ENST00000429662 HAX1O00165 279 aa12.43□□□□□ -0.42
GABPB1-205ENST00000429662 KIF14Q15058 1648 aa12.43□□□□□ -0.42
GABPB1-205ENST00000429662 UBAP1LF5GYI3 381 aa12.43□□□□□ -0.42
GABPB1-205ENST00000429662 HSPA1LP34931 641 aa12.43□□□□□ -0.42
GABPB1-205ENST00000429662 ZNF518AQ6AHZ1 1483 aa12.42□□□□□ -0.42
GABPB1-205ENST00000429662 ITGAEP38570 1179 aa12.42□□□□□ -0.42
GABPB1-205ENST00000429662 PLA2R1Q13018 1463 aa12.42□□□□□ -0.42
GABPB1-205ENST00000429662 KIDINS220Q9ULH0 1771 aa12.42□□□□□ -0.42
GABPB1-205ENST00000429662 SRCAPQ6ZRS2 3230 aa12.41□□□□□ -0.42
GABPB1-205ENST00000429662 NEURL4Q96JN8 1562 aa12.4□□□□□ -0.42
GABPB1-205ENST00000429662 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.42
GABPB1-205ENST00000429662 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
GABPB1-205ENST00000429662 NPATQ14207 1427 aa12.4□□□□□ -0.43
GABPB1-205ENST00000429662 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
GABPB1-205ENST00000429662 CDC42BPBQ9Y5S2 1711 aa12.39□□□□□ -0.43
GABPB1-205ENST00000429662 FAM50AQ14320 339 aaKnown RBP12.39□□□□□ -0.43
GABPB1-205ENST00000429662 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
GABPB1-205ENST00000429662 LRRIQ1Q96JM4 1722 aa12.37□□□□□ -0.43
GABPB1-205ENST00000429662 ZNF692Q9BU19 519 aaPredicted RBP12.37□□□□□ -0.43
GABPB1-205ENST00000429662 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
GABPB1-205ENST00000429662 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
GABPB1-205ENST00000429662 EVX2Q03828 476 aa12.36□□□□□ -0.43
GABPB1-205ENST00000429662 POLR1AO95602 1720 aaPredicted RBP12.36□□□□□ -0.43
GABPB1-205ENST00000429662 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
GABPB1-205ENST00000429662 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
GABPB1-205ENST00000429662 ABCC1P33527 1531 aa12.35□□□□□ -0.43
GABPB1-205ENST00000429662 FGD6Q6ZV73 1430 aa12.35□□□□□ -0.43
GABPB1-205ENST00000429662 AFAP1Q8N556 730 aa12.34□□□□□ -0.43
GABPB1-205ENST00000429662 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
GABPB1-205ENST00000429662 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
GABPB1-205ENST00000429662 VWDEQ8N2E2 1590 aa12.34□□□□□ -0.43
GABPB1-205ENST00000429662 CLTCQ00610 1675 aaKnown RBP12.34□□□□□ -0.43
GABPB1-205ENST00000429662 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
GABPB1-205ENST00000429662 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
GABPB1-205ENST00000429662 DNMT1P26358 1616 aaKnown RBP12.32□□□□□ -0.44
GABPB1-205ENST00000429662 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
GABPB1-205ENST00000429662 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
GABPB1-205ENST00000429662 CPS1P31327 1500 aa12.32□□□□□ -0.44
GABPB1-205ENST00000429662 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
GABPB1-205ENST00000429662 PREX2Q70Z35 1606 aa12.32□□□□□ -0.44
GABPB1-205ENST00000429662 PPP1R15AO75807 674 aaPredicted RBP12.31□□□□□ -0.44
GABPB1-205ENST00000429662 HFM1A2PYH4 1435 aa12.31□□□□□ -0.44
GABPB1-205ENST00000429662 PTPRKQ15262 1439 aa12.31□□□□□ -0.44
GABPB1-205ENST00000429662 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
GABPB1-205ENST00000429662 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
GABPB1-205ENST00000429662 SETD1AO15047 1707 aaKnown RBP12.3□□□□□ -0.44
GABPB1-205ENST00000429662 CCDC18Q5T9S5 1454 aa12.3□□□□□ -0.44
GABPB1-205ENST00000429662 EHBP1L1Q8N3D4 1523 aa12.3□□□□□ -0.44
GABPB1-205ENST00000429662 ARHGAP5Q13017 1502 aa12.29□□□□□ -0.44
GABPB1-205ENST00000429662 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
GABPB1-205ENST00000429662 SHANK2Q9UPX8 1470 aa12.28□□□□□ -0.44
GABPB1-205ENST00000429662 ZMYM3Q14202 1370 aa12.28□□□□□ -0.44
GABPB1-205ENST00000429662 PKD2Q13563 968 aa12.28□□□□□ -0.44
GABPB1-205ENST00000429662 EFCAB2Q5VUJ9 269 aa12.27□□□□□ -0.45
GABPB1-205ENST00000429662 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.45
GABPB1-205ENST00000429662 SUPT16HQ9Y5B9 1047 aaKnown RBP12.27□□□□□ -0.45
GABPB1-205ENST00000429662 SAMD9LQ8IVG5 1584 aa12.27□□□□□ -0.45
GABPB1-205ENST00000429662 CDC42BPAQ5VT25 1732 aa12.26□□□□□ -0.45
GABPB1-205ENST00000429662 TONSLQ96HA7 1378 aa12.26□□□□□ -0.45
GABPB1-205ENST00000429662 NCOA2Q15596 1464 aa12.26□□□□□ -0.45
GABPB1-205ENST00000429662 PIP4K2BP78356 416 aa12.25□□□□□ -0.45
GABPB1-205ENST00000429662 XIRP1Q702N8 1843 aaKnown RBP12.24□□□□□ -0.45
GABPB1-205ENST00000429662 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
GABPB1-205ENST00000429662 A2ML1A8K2U0 1454 aa12.24□□□□□ -0.45
GABPB1-205ENST00000429662 RNF17Q9BXT8 1623 aaKnown RBP12.24□□□□□ -0.45
GABPB1-205ENST00000429662 PTPN23Q9H3S7 1636 aa12.24□□□□□ -0.45
GABPB1-205ENST00000429662 ANP32CO43423 234 aa12.23□□□□□ -0.45
GABPB1-205ENST00000429662 TROQ12816 1431 aaPredicted RBP12.23□□□□□ -0.45
GABPB1-205ENST00000429662 NAIPQ13075 1403 aa12.22□□□□□ -0.45
GABPB1-205ENST00000429662 MIA2Q96PC5 1412 aa12.21□□□□□ -0.45
GABPB1-205ENST00000429662 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
GABPB1-205ENST00000429662 DEPDC5O75140 1603 aa12.21□□□□□ -0.46
GABPB1-205ENST00000429662 SYNMO15061 1565 aa12.21□□□□□ -0.46
GABPB1-205ENST00000429662 MED14O60244 1454 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms