RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 HFM1A2PYH4 1435 aa11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-206ENST00000429440 EIF4G3O43432 1585 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-206ENST00000429440 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-206ENST00000429440 TNNT2P45379 298 aaPredicted RBP11.43□□□□□ -0.58
CDC42BPA-206ENST00000429440 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
CDC42BPA-206ENST00000429440 RIPK4P57078 832 aa11.43□□□□□ -0.58
CDC42BPA-206ENST00000429440 TEX2Q8IWB9 1127 aa11.43□□□□□ -0.58
CDC42BPA-206ENST00000429440 MYH16Q9H6N6 1097 aa11.42□□□□□ -0.58
CDC42BPA-206ENST00000429440 NAIPQ13075 1403 aa11.42□□□□□ -0.58
CDC42BPA-206ENST00000429440 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-206ENST00000429440 DISP1Q96F81 1524 aa11.42□□□□□ -0.58
CDC42BPA-206ENST00000429440 TCOF1Q13428 1488 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-206ENST00000429440 TAF3Q5VWG9 929 aa11.41□□□□□ -0.58
CDC42BPA-206ENST00000429440 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
CDC42BPA-206ENST00000429440 KIAA0556O60303 1618 aa11.4□□□□□ -0.58
CDC42BPA-206ENST00000429440 OFD1O75665 1012 aa11.4□□□□□ -0.58
CDC42BPA-206ENST00000429440 PANK2Q9BZ23 570 aa11.4□□□□□ -0.58
CDC42BPA-206ENST00000429440 GTPBP4Q9BZE4 634 aaKnown RBP11.4□□□□□ -0.58
CDC42BPA-206ENST00000429440 KIAA0586Q9BVV6 1533 aa11.39□□□□□ -0.59
CDC42BPA-206ENST00000429440 ZSCAN20P17040 1043 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-206ENST00000429440 RRP1P56182 461 aaKnown RBP11.39□□□□□ -0.59
CDC42BPA-206ENST00000429440 ZNF830Q96NB3 372 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPA-206ENST00000429440 GRIN2AQ12879 1464 aa11.39□□□□□ -0.59
CDC42BPA-206ENST00000429440 EXOC6Q8TAG9 804 aa11.39□□□□□ -0.59
CDC42BPA-206ENST00000429440 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-206ENST00000429440 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-206ENST00000429440 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
CDC42BPA-206ENST00000429440 TRIM44Q96DX7 344 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPA-206ENST00000429440 LETM1O95202 739 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-206ENST00000429440 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
CDC42BPA-206ENST00000429440 GCC2Q8IWJ2 1684 aa11.37□□□□□ -0.59
CDC42BPA-206ENST00000429440 TONSLQ96HA7 1378 aa11.36□□□□□ -0.59
CDC42BPA-206ENST00000429440 DENND4BO75064 1496 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-206ENST00000429440 KDM6BO15054 1643 aa11.35□□□□□ -0.59
CDC42BPA-206ENST00000429440 NUP153P49790 1475 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-206ENST00000429440 FAM13BQ9NYF5 915 aa11.35□□□□□ -0.59
CDC42BPA-206ENST00000429440 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
CDC42BPA-206ENST00000429440 CEP170Q5SW79 1584 aa11.35□□□□□ -0.59
CDC42BPA-206ENST00000429440 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
CDC42BPA-206ENST00000429440 DYNC1I1O14576 645 aa11.34□□□□□ -0.59
CDC42BPA-206ENST00000429440 CCDC94Q9BW85 323 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-206ENST00000429440 GRPEL1Q9HAV7 217 aa11.34□□□□□ -0.59
CDC42BPA-206ENST00000429440 RAPGEF6Q8TEU7 1601 aa11.33□□□□□ -0.6
CDC42BPA-206ENST00000429440 MIA2Q96PC5 1412 aa11.33□□□□□ -0.6
CDC42BPA-206ENST00000429440 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-206ENST00000429440 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
CDC42BPA-206ENST00000429440 BECN1Q14457 450 aa11.32□□□□□ -0.6
CDC42BPA-206ENST00000429440 FOXD1Q16676 465 aa11.32□□□□□ -0.6
CDC42BPA-206ENST00000429440 ERCC6Q03468 1493 aa11.31□□□□□ -0.6
CDC42BPA-206ENST00000429440 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
CDC42BPA-206ENST00000429440 ZSCAN30Q86W11 494 aa11.31□□□□□ -0.6
CDC42BPA-206ENST00000429440 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
CDC42BPA-206ENST00000429440 SECISBP2LQ93073 1101 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-206ENST00000429440 ANTXR1Q9H6X2 564 aa11.31□□□□□ -0.6
CDC42BPA-206ENST00000429440 SYNJ2O15056 1496 aa11.3□□□□□ -0.6
CDC42BPA-206ENST00000429440 KTN1Q86UP2 1357 aaKnown RBP11.3□□□□□ -0.6
CDC42BPA-206ENST00000429440 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
CDC42BPA-206ENST00000429440 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
CDC42BPA-206ENST00000429440 DHX37Q8IY37 1157 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-206ENST00000429440 BCCIPQ9P287 314 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC42BPA-206ENST00000429440 SLC20A2Q08357 652 aa11.29□□□□□ -0.6
CDC42BPA-206ENST00000429440 NUP160Q12769 1436 aa11.28□□□□□ -0.6
CDC42BPA-206ENST00000429440 RRP7BPQ9NSQ0 103 aa11.28□□□□□ -0.6
CDC42BPA-206ENST00000429440 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
CDC42BPA-206ENST00000429440 DNMT1P26358 1616 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-206ENST00000429440 VGLL3A8MV65 326 aa11.28□□□□□ -0.6
CDC42BPA-206ENST00000429440 HSPA5P11021 654 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-206ENST00000429440 MCM4P33991 863 aa11.28□□□□□ -0.6
CDC42BPA-206ENST00000429440 NCOA1Q15788 1441 aa11.27□□□□□ -0.6
CDC42BPA-206ENST00000429440 CDK11BP21127 795 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-206ENST00000429440 RGS22Q8NE09 1264 aa11.27□□□□□ -0.61
CDC42BPA-206ENST00000429440 CHIC2Q9UKJ5 165 aa11.27□□□□□ -0.61
CDC42BPA-206ENST00000429440 PLB1Q6P1J6 1458 aa11.27□□□□□ -0.61
CDC42BPA-206ENST00000429440 CCDC7Q96M83 1385 aa11.27□□□□□ -0.61
CDC42BPA-206ENST00000429440 KDM2BQ8NHM5 1336 aa11.26□□□□□ -0.61
CDC42BPA-206ENST00000429440 PPP1R9BQ96SB3 815 aa11.26□□□□□ -0.61
CDC42BPA-206ENST00000429440 CCDC173Q0VFZ6 552 aa11.26□□□□□ -0.61
CDC42BPA-206ENST00000429440 ABCC5O15440 1437 aa11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 DAPK1P53355 1430 aa11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 UQCRHLA0A096LP55 91 aa11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 TRAK2O60296 914 aa11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 UQCRHP07919 91 aa11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 EIF4G2P78344 907 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 IRX3P78415 501 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 CENPQQ7L2Z9 268 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 MSNP26038 577 aaKnown RBP11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 HS1BP3Q53T59 392 aa11.25□□□□□ -0.61
CDC42BPA-206ENST00000429440 ZNF644Q9H582 1327 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-206ENST00000429440 PRG4Q92954 1404 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-206ENST00000429440 DNTTIP2Q5QJE6 756 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-206ENST00000429440 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-206ENST00000429440 KIF14Q15058 1648 aa11.24□□□□□ -0.61
CDC42BPA-206ENST00000429440 ADCY10Q96PN6 1610 aa11.24□□□□□ -0.61
CDC42BPA-206ENST00000429440 R3HCC1Q9Y3T6 440 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-206ENST00000429440 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
CDC42BPA-206ENST00000429440 TROQ12816 1431 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms