RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MARCH6O60337 910 aa17.76■□□□□ 0.43
PTPN13-203ENST00000427191 ARGLU1Q9NWB6 273 aaPredicted RBP17.76■□□□□ 0.43
PTPN13-203ENST00000427191 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
PTPN13-203ENST00000427191 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
PTPN13-203ENST00000427191 AKAP17AQ02040 695 aaKnown RBP17.75■□□□□ 0.43
PTPN13-203ENST00000427191 CPLX2Q6PUV4 134 aaKnown RBP17.75■□□□□ 0.43
PTPN13-203ENST00000427191 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.75■□□□□ 0.43
PTPN13-203ENST00000427191 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
PTPN13-203ENST00000427191 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
PTPN13-203ENST00000427191 ZNF771Q7L3S4 317 aaPredicted RBP17.74■□□□□ 0.43
PTPN13-203ENST00000427191 APBB1O00213 710 aa17.74■□□□□ 0.43
PTPN13-203ENST00000427191 ARID3AQ99856 593 aa17.74■□□□□ 0.43
PTPN13-203ENST00000427191 FAM184AQ8NB25 1140 aa17.73■□□□□ 0.43
PTPN13-203ENST00000427191 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
PTPN13-203ENST00000427191 ROCK1Q13464 1354 aa17.72■□□□□ 0.43
PTPN13-203ENST00000427191 RUFY1Q96T51 708 aa17.72■□□□□ 0.43
PTPN13-203ENST00000427191 CWC15Q9P013 229 aaKnown RBP17.71■□□□□ 0.43
PTPN13-203ENST00000427191 PES1O00541 588 aaKnown RBP17.71■□□□□ 0.43
PTPN13-203ENST00000427191 CREBRFQ8IUR6 639 aa17.71■□□□□ 0.43
PTPN13-203ENST00000427191 REC8O95072 547 aa17.71■□□□□ 0.43
PTPN13-203ENST00000427191 AMOTL1Q8IY63 956 aa17.71■□□□□ 0.43
PTPN13-203ENST00000427191 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
PTPN13-203ENST00000427191 RDXP35241 583 aaKnown RBP17.71■□□□□ 0.43
PTPN13-203ENST00000427191 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
PTPN13-203ENST00000427191 MAP7D2Q96T17 732 aa17.71■□□□□ 0.43
PTPN13-203ENST00000427191 SYNE3Q6ZMZ3 975 aa17.71■□□□□ 0.42
PTPN13-203ENST00000427191 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 CHMP3Q9Y3E7 222 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 G3V3G9 751 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 DCAF8Q5TAQ9 597 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 NGEFQ8N5V2 710 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.7■□□□□ 0.42
PTPN13-203ENST00000427191 KIF15Q9NS87 1388 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 SIN3AQ96ST3 1273 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 UACAQ9BZF9 1416 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 MYO6Q9UM54 1294 aa17.7■□□□□ 0.42
PTPN13-203ENST00000427191 GSE1Q14687 1217 aa17.69■□□□□ 0.42
PTPN13-203ENST00000427191 TCEAL9Q9UHQ7 104 aa17.69■□□□□ 0.42
PTPN13-203ENST00000427191 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
PTPN13-203ENST00000427191 ANKRD30AQ9BXX3 1397 aa17.69■□□□□ 0.42
PTPN13-203ENST00000427191 HSPA5P11021 654 aaKnown RBP17.68■□□□□ 0.42
PTPN13-203ENST00000427191 FAM161AQ3B820 660 aa17.68■□□□□ 0.42
PTPN13-203ENST00000427191 CCAR2Q8N163 923 aaKnown RBP17.68■□□□□ 0.42
PTPN13-203ENST00000427191 DDX49Q9Y6V7 483 aaKnown RBP17.68■□□□□ 0.42
PTPN13-203ENST00000427191 TRIM29Q14134 588 aa17.67■□□□□ 0.42
PTPN13-203ENST00000427191 HSP90B2PQ58FF3 399 aa17.67■□□□□ 0.42
PTPN13-203ENST00000427191 VPS53Q5VIR6 699 aa17.67■□□□□ 0.42
PTPN13-203ENST00000427191 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
PTPN13-203ENST00000427191 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
PTPN13-203ENST00000427191 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
PTPN13-203ENST00000427191 AAMPQ13685 434 aa17.65■□□□□ 0.42
PTPN13-203ENST00000427191 AEBP2Q6ZN18 517 aaPredicted RBP17.65■□□□□ 0.42
PTPN13-203ENST00000427191 DHX8Q14562 1220 aaKnown RBP17.65■□□□□ 0.42
PTPN13-203ENST00000427191 ERCC4Q92889 916 aaPredicted RBP17.65■□□□□ 0.42
PTPN13-203ENST00000427191 ZKSCAN1P17029 563 aaPredicted RBP17.64■□□□□ 0.41
PTPN13-203ENST00000427191 CGNL1Q0VF96 1302 aa17.64■□□□□ 0.41
PTPN13-203ENST00000427191 NAT10Q9H0A0 1025 aaKnown RBP17.63■□□□□ 0.41
PTPN13-203ENST00000427191 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
PTPN13-203ENST00000427191 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
PTPN13-203ENST00000427191 NOL10Q9BSC4 688 aaKnown RBP17.62■□□□□ 0.41
PTPN13-203ENST00000427191 DIAPH3Q9NSV4 1193 aa17.62■□□□□ 0.41
PTPN13-203ENST00000427191 CCP110O43303 1012 aa17.61■□□□□ 0.41
PTPN13-203ENST00000427191 FRAT2O75474 233 aaPredicted RBP17.6■□□□□ 0.41
PTPN13-203ENST00000427191 HOMER1Q86YM7 354 aa17.6■□□□□ 0.41
PTPN13-203ENST00000427191 TOMM22Q9NS69 142 aa17.6■□□□□ 0.41
PTPN13-203ENST00000427191 PDE4CQ08493 712 aa17.6■□□□□ 0.41
PTPN13-203ENST00000427191 CCDC66A2RUB6 948 aa17.6■□□□□ 0.41
PTPN13-203ENST00000427191 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.6■□□□□ 0.41
PTPN13-203ENST00000427191 RSPH4AQ5TD94 716 aa17.6■□□□□ 0.41
PTPN13-203ENST00000427191 SOX12O15370 315 aa17.6■□□□□ 0.41
PTPN13-203ENST00000427191 CCDC18Q5T9S5 1454 aa17.59■□□□□ 0.41
PTPN13-203ENST00000427191 PAK3O75914 559 aaPredicted RBP17.59■□□□□ 0.41
PTPN13-203ENST00000427191 PCMTD1Q96MG8 357 aaPredicted RBP17.58■□□□□ 0.4
PTPN13-203ENST00000427191 NUCB2P80303 420 aa17.58■□□□□ 0.4
PTPN13-203ENST00000427191 PKD2Q13563 968 aa17.58■□□□□ 0.4
PTPN13-203ENST00000427191 MYBBP1AQ9BQG0 1328 aaKnown RBP17.58■□□□□ 0.4
PTPN13-203ENST00000427191 ZNF330Q9Y3S2 320 aaPredicted RBP17.58■□□□□ 0.4
PTPN13-203ENST00000427191 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.4
PTPN13-203ENST00000427191 E9PSI1 815 aa17.57■□□□□ 0.4
PTPN13-203ENST00000427191 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
PTPN13-203ENST00000427191 ZRSR2Q15696 482 aaKnown RBP17.57■□□□□ 0.4
PTPN13-203ENST00000427191 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
PTPN13-203ENST00000427191 LETM1O95202 739 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-203ENST00000427191 TRIM34Q9BYJ4 488 aa17.55■□□□□ 0.4
PTPN13-203ENST00000427191 MNS1Q8NEH6 495 aa17.55■□□□□ 0.4
PTPN13-203ENST00000427191 NEXNQ0ZGT2 675 aa17.55■□□□□ 0.4
PTPN13-203ENST00000427191 NUP155O75694 1391 aa17.55■□□□□ 0.4
PTPN13-203ENST00000427191 KIF7Q2M1P5 1343 aa17.54■□□□□ 0.4
PTPN13-203ENST00000427191 SASS6Q6UVJ0 657 aa17.54■□□□□ 0.4
PTPN13-203ENST00000427191 CPLX1O14810 134 aa17.54■□□□□ 0.4
PTPN13-203ENST00000427191 ODF2Q5BJF6 829 aa17.54■□□□□ 0.4
PTPN13-203ENST00000427191 ZKSCAN2Q63HK3 967 aa17.54■□□□□ 0.4
PTPN13-203ENST00000427191 VSIG10Q8N0Z9 540 aa17.54■□□□□ 0.4
PTPN13-203ENST00000427191 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
PTPN13-203ENST00000427191 KRI1Q8N9T8 703 aaKnown RBP17.54■□□□□ 0.4
PTPN13-203ENST00000427191 TRDNQ13061 729 aa17.53■□□□□ 0.4
PTPN13-203ENST00000427191 PATL2C9JE40 543 aaKnown RBP17.53■□□□□ 0.4
PTPN13-203ENST00000427191 FAM43AQ8N2R8 423 aa17.53■□□□□ 0.4
PTPN13-203ENST00000427191 EID1Q9Y6B2 187 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms