RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 OS9Q13438 667 aaPredicted RBP10.86□□□□□ -0.67
CHD7-201ENST00000423902 SIN3AQ96ST3 1273 aa10.86□□□□□ -0.67
CHD7-201ENST00000423902 TRAK1Q9UPV9 953 aa10.86□□□□□ -0.67
CHD7-201ENST00000423902 HMGB2P26583 209 aaKnown RBP10.86□□□□□ -0.67
CHD7-201ENST00000423902 AKNAQ7Z591 1439 aa10.85□□□□□ -0.67
CHD7-201ENST00000423902 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
CHD7-201ENST00000423902 KTN1Q86UP2 1357 aaKnown RBP10.85□□□□□ -0.67
CHD7-201ENST00000423902 ZNF608Q9ULD9 1512 aaPredicted RBP10.85□□□□□ -0.67
CHD7-201ENST00000423902 SCAPERQ9BY12 1400 aa10.85□□□□□ -0.67
CHD7-201ENST00000423902 LRRC9Q6ZRR7 1453 aa10.85□□□□□ -0.67
CHD7-201ENST00000423902 PROSER2Q86WR7 435 aaPredicted RBP10.84□□□□□ -0.67
CHD7-201ENST00000423902 SLC52A1Q9NWF4 448 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 G3V3G9 751 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 DCAF8Q5TAQ9 597 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 C9orf84Q5VXU9 1444 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 COG3Q96JB2 828 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 RAPGEF6Q8TEU7 1601 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 GPRASP1Q5JY77 1395 aa10.84□□□□□ -0.67
CHD7-201ENST00000423902 ADGRL1O94910 1474 aa10.83□□□□□ -0.67
CHD7-201ENST00000423902 CHD1O14646 1710 aa10.83□□□□□ -0.68
CHD7-201ENST00000423902 C1orf141Q5JVX7 400 aa10.83□□□□□ -0.68
CHD7-201ENST00000423902 ZNF330Q9Y3S2 320 aaPredicted RBP10.83□□□□□ -0.68
CHD7-201ENST00000423902 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
CHD7-201ENST00000423902 MIA2Q96PC5 1412 aa10.83□□□□□ -0.68
CHD7-201ENST00000423902 ANKRD50Q9ULJ7 1429 aa10.83□□□□□ -0.68
CHD7-201ENST00000423902 LMOD3Q0VAK6 560 aa10.83□□□□□ -0.68
CHD7-201ENST00000423902 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
CHD7-201ENST00000423902 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.82□□□□□ -0.68
CHD7-201ENST00000423902 GTF2E1P29083 439 aaPredicted RBP10.82□□□□□ -0.68
CHD7-201ENST00000423902 PHLDB1Q86UU1 1377 aa10.81□□□□□ -0.68
CHD7-201ENST00000423902 RAPGEF3O95398 923 aa10.81□□□□□ -0.68
CHD7-201ENST00000423902 CFAP74Q9C0B2 1584 aa10.81□□□□□ -0.68
CHD7-201ENST00000423902 LTV1Q96GA3 475 aaPredicted RBP10.81□□□□□ -0.68
CHD7-201ENST00000423902 PIP4K2BP78356 416 aa10.81□□□□□ -0.68
CHD7-201ENST00000423902 MSH5O43196 834 aa10.8□□□□□ -0.68
CHD7-201ENST00000423902 DENND4BO75064 1496 aaPredicted RBP10.8□□□□□ -0.68
CHD7-201ENST00000423902 WASHC2AQ641Q2 1341 aa10.8□□□□□ -0.68
CHD7-201ENST00000423902 ADAMTS12P58397 1594 aa10.8□□□□□ -0.68
CHD7-201ENST00000423902 ANP32AP39687 249 aaKnown RBP10.79□□□□□ -0.68
CHD7-201ENST00000423902 PPP6R1Q9UPN7 881 aa10.79□□□□□ -0.68
CHD7-201ENST00000423902 CGNL1Q0VF96 1302 aa10.79□□□□□ -0.68
CHD7-201ENST00000423902 MINK1Q8N4C8 1332 aaPredicted RBP10.78□□□□□ -0.68
CHD7-201ENST00000423902 U2AF1L5P0DN76 240 aaPredicted RBP10.78□□□□□ -0.68
CHD7-201ENST00000423902 U2AF1Q01081 240 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHD7-201ENST00000423902 PRXQ9BXM0 1461 aa10.78□□□□□ -0.68
CHD7-201ENST00000423902 CCDC136Q96JN2 1154 aa10.78□□□□□ -0.68
CHD7-201ENST00000423902 FANCAO15360 1455 aa10.77□□□□□ -0.68
CHD7-201ENST00000423902 RALBP1Q15311 655 aa10.77□□□□□ -0.68
CHD7-201ENST00000423902 CCDC141Q6ZP82 1450 aa10.77□□□□□ -0.69
CHD7-201ENST00000423902 STK31Q9BXU1 1019 aa10.77□□□□□ -0.69
CHD7-201ENST00000423902 TAF7LQ5H9L4 462 aa10.76□□□□□ -0.69
CHD7-201ENST00000423902 ARHGEF11O15085 1522 aa10.76□□□□□ -0.69
CHD7-201ENST00000423902 TIAM1Q13009 1591 aa10.76□□□□□ -0.69
CHD7-201ENST00000423902 IPO8O15397 1037 aaKnown RBP10.75□□□□□ -0.69
CHD7-201ENST00000423902 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
CHD7-201ENST00000423902 ESCO1Q5FWF5 840 aa10.74□□□□□ -0.69
CHD7-201ENST00000423902 PCF11O94913 1555 aaKnown RBP10.74□□□□□ -0.69
CHD7-201ENST00000423902 PTPN23Q9H3S7 1636 aa10.74□□□□□ -0.69
CHD7-201ENST00000423902 ASXL2Q76L83 1435 aa10.74□□□□□ -0.69
CHD7-201ENST00000423902 CDK11BP21127 795 aaKnown RBP10.74□□□□□ -0.69
CHD7-201ENST00000423902 ZNF644Q9H582 1327 aaPredicted RBP10.74□□□□□ -0.69
CHD7-201ENST00000423902 TTC5Q8N0Z6 440 aa10.74□□□□□ -0.69
CHD7-201ENST00000423902 SYTL4Q96C24 671 aaPredicted RBP10.74□□□□□ -0.69
CHD7-201ENST00000423902 MYO5CQ9NQX4 1742 aa10.74□□□□□ -0.69
CHD7-201ENST00000423902 SMG6Q86US8 1419 aaKnown RBP10.73□□□□□ -0.69
CHD7-201ENST00000423902 WDR7Q9Y4E6 1490 aa10.73□□□□□ -0.69
CHD7-201ENST00000423902 HFM1A2PYH4 1435 aa10.72□□□□□ -0.69
CHD7-201ENST00000423902 SETD1BQ9UPS6 1966 aaKnown RBP10.71□□□□□ -0.69
CHD7-201ENST00000423902 RPGRIP1LQ68CZ1 1315 aa10.71□□□□□ -0.69
CHD7-201ENST00000423902 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
CHD7-201ENST00000423902 RAPGEF4Q8WZA2 1011 aa10.71□□□□□ -0.69
CHD7-201ENST00000423902 L3MBTL2Q969R5 705 aa10.71□□□□□ -0.69
CHD7-201ENST00000423902 ANP32BQ92688 251 aaKnown RBP10.71□□□□□ -0.7
CHD7-201ENST00000423902 HSPA5P11021 654 aaKnown RBP10.71□□□□□ -0.7
CHD7-201ENST00000423902 TEFQ10587 303 aa10.71□□□□□ -0.7
CHD7-201ENST00000423902 ABTB2Q8N961 1025 aa10.71□□□□□ -0.7
CHD7-201ENST00000423902 THOC2Q8NI27 1593 aaKnown RBP10.7□□□□□ -0.7
CHD7-201ENST00000423902 KIAA0556O60303 1618 aa10.7□□□□□ -0.7
CHD7-201ENST00000423902 CAMSAP2Q08AD1 1489 aa10.69□□□□□ -0.7
CHD7-201ENST00000423902 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
CHD7-201ENST00000423902 FRAT1Q92837 279 aaPredicted RBP10.69□□□□□ -0.7
CHD7-201ENST00000423902 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
CHD7-201ENST00000423902 LRPPRCP42704 1394 aaKnown RBP10.69□□□□□ -0.7
CHD7-201ENST00000423902 NUTM2BA6NNL0 878 aaPredicted RBP10.69□□□□□ -0.7
CHD7-201ENST00000423902 NUTM2EB1AL46 878 aaPredicted RBP10.69□□□□□ -0.7
CHD7-201ENST00000423902 TOM1O60784 492 aa10.69□□□□□ -0.7
CHD7-201ENST00000423902 KCNJ4P48050 445 aa10.69□□□□□ -0.7
CHD7-201ENST00000423902 NUTM2AQ8IVF1 878 aaPredicted RBP10.69□□□□□ -0.7
CHD7-201ENST00000423902 FGD1P98174 961 aa10.69□□□□□ -0.7
CHD7-201ENST00000423902 FAM135AQ9P2D6 1515 aa10.69□□□□□ -0.7
CHD7-201ENST00000423902 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
CHD7-201ENST00000423902 CFAP44Q96MT7 982 aa10.68□□□□□ -0.7
CHD7-201ENST00000423902 GORABQ5T7V8 394 aa10.68□□□□□ -0.7
CHD7-201ENST00000423902 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
CHD7-201ENST00000423902 ISY1Q9ULR0 285 aaKnown RBP10.67□□□□□ -0.7
CHD7-201ENST00000423902 ZNF518AQ6AHZ1 1483 aa10.67□□□□□ -0.7
CHD7-201ENST00000423902 ABCA5Q8WWZ7 1642 aa10.67□□□□□ -0.7
CHD7-201ENST00000423902 NLRP6P59044 892 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms