RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 ST20-MTHFSA0A0A6YYL1 179 aa16.6■□□□□ 0.25
SCAF8-203ENST00000417268 RALBP1Q15311 655 aa16.6■□□□□ 0.25
SCAF8-203ENST00000417268 TRIM44Q96DX7 344 aaPredicted RBP16.6■□□□□ 0.25
SCAF8-203ENST00000417268 MYH16Q9H6N6 1097 aa16.59■□□□□ 0.25
SCAF8-203ENST00000417268 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
SCAF8-203ENST00000417268 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.24
SCAF8-203ENST00000417268 NGDNQ8NEJ9 315 aaKnown RBP16.58■□□□□ 0.24
SCAF8-203ENST00000417268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.243e-7■□□□□ 9.3
SCAF8-203ENST00000417268 NAP1L5Q96NT1 182 aaPredicted RBP16.57■□□□□ 0.24
SCAF8-203ENST00000417268 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
SCAF8-203ENST00000417268 CD109Q6YHK3 1445 aa16.56■□□□□ 0.24
SCAF8-203ENST00000417268 ARHGEF11O15085 1522 aa16.54■□□□□ 0.24
SCAF8-203ENST00000417268 DAPK1P53355 1430 aa16.54■□□□□ 0.24
SCAF8-203ENST00000417268 MAP3K1Q13233 1512 aa16.53■□□□□ 0.24
SCAF8-203ENST00000417268 EVC2Q86UK5 1308 aa16.53■□□□□ 0.24
SCAF8-203ENST00000417268 HFM1A2PYH4 1435 aa16.52■□□□□ 0.24
SCAF8-203ENST00000417268 USP47Q96K76 1375 aa16.52■□□□□ 0.24
SCAF8-203ENST00000417268 NUTM2FA1L443 756 aa16.5■□□□□ 0.23
SCAF8-203ENST00000417268 KIF21AQ7Z4S6 1674 aa16.5■□□□□ 0.23
SCAF8-203ENST00000417268 WDR62O43379 1518 aa16.5■□□□□ 0.23
SCAF8-203ENST00000417268 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.5■□□□□ 0.23
SCAF8-203ENST00000417268 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
SCAF8-203ENST00000417268 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.232e-7■■□□□ 13
SCAF8-203ENST00000417268 FTSJ3Q8IY81 847 aaKnown RBP16.49■□□□□ 0.23
SCAF8-203ENST00000417268 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
SCAF8-203ENST00000417268 ROCK1Q13464 1354 aa16.48■□□□□ 0.23
SCAF8-203ENST00000417268 MINK1Q8N4C8 1332 aaPredicted RBP16.47■□□□□ 0.23
SCAF8-203ENST00000417268 KIF14Q15058 1648 aa16.47■□□□□ 0.23
SCAF8-203ENST00000417268 SLC52A1Q9NWF4 448 aa16.47■□□□□ 0.23
SCAF8-203ENST00000417268 NLRP13Q86W25 1043 aa16.47■□□□□ 0.23
SCAF8-203ENST00000417268 RTF1Q92541 710 aaKnown RBP16.47■□□□□ 0.23
SCAF8-203ENST00000417268 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
SCAF8-203ENST00000417268 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.23
SCAF8-203ENST00000417268 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
SCAF8-203ENST00000417268 PANK3Q9H999 370 aa16.45■□□□□ 0.22
SCAF8-203ENST00000417268 MS4A1P11836 297 aa16.45■□□□□ 0.22
SCAF8-203ENST00000417268 RGS3P49796 1198 aa16.45■□□□□ 0.22
SCAF8-203ENST00000417268 CENPJQ9HC77 1338 aaPredicted RBP16.45■□□□□ 0.22
SCAF8-203ENST00000417268 ADAMTS12P58397 1594 aa16.44■□□□□ 0.22
SCAF8-203ENST00000417268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■□□□□ 11.3
SCAF8-203ENST00000417268 ADGRL1O94910 1474 aa16.44■□□□□ 0.22
SCAF8-203ENST00000417268 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
SCAF8-203ENST00000417268 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
SCAF8-203ENST00000417268 CALD1Q05682 793 aaKnown RBP16.42■□□□□ 0.22
SCAF8-203ENST00000417268 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
SCAF8-203ENST00000417268 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
SCAF8-203ENST00000417268 CGNL1Q0VF96 1302 aa16.41■□□□□ 0.22
SCAF8-203ENST00000417268 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
SCAF8-203ENST00000417268 AMPHP49418 695 aa16.41■□□□□ 0.22
SCAF8-203ENST00000417268 TXNDC2Q86VQ3 553 aa16.41■□□□□ 0.22
SCAF8-203ENST00000417268 GOLGA6L22H0YM25 854 aa16.4■□□□□ 0.22
SCAF8-203ENST00000417268 NAIPQ13075 1403 aa16.39■□□□□ 0.22
SCAF8-203ENST00000417268 UGGT2Q9NYU1 1516 aa16.39■□□□□ 0.21
SCAF8-203ENST00000417268 COG3Q96JB2 828 aa16.38■□□□□ 0.21
SCAF8-203ENST00000417268 ABCC5O15440 1437 aa16.38■□□□□ 0.21
SCAF8-203ENST00000417268 ATP10BO94823 1461 aa16.38■□□□□ 0.21
SCAF8-203ENST00000417268 CFAP70Q5T0N1 1121 aa16.37■□□□□ 0.21
SCAF8-203ENST00000417268 FANCAO15360 1455 aa16.37■□□□□ 0.21
SCAF8-203ENST00000417268 TMEM132EQ6IEE7 984 aa16.37■□□□□ 0.21
SCAF8-203ENST00000417268 IPO9Q96P70 1041 aaKnown RBP16.36■□□□□ 0.21
SCAF8-203ENST00000417268 NCLP19338 710 aaKnown RBP16.36■□□□□ 0.21
SCAF8-203ENST00000417268 THOC2Q8NI27 1593 aaKnown RBP16.36■□□□□ 0.21
SCAF8-203ENST00000417268 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
SCAF8-203ENST00000417268 PTPN23Q9H3S7 1636 aa16.36■□□□□ 0.21
SCAF8-203ENST00000417268 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
SCAF8-203ENST00000417268 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
SCAF8-203ENST00000417268 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
SCAF8-203ENST00000417268 NUP160Q12769 1436 aa16.35■□□□□ 0.21
SCAF8-203ENST00000417268 RPGRIP1LQ68CZ1 1315 aa16.34■□□□□ 0.21
SCAF8-203ENST00000417268 CHMP4AQ9BY43 222 aa16.34■□□□□ 0.21
SCAF8-203ENST00000417268 ASXL2Q76L83 1435 aa16.33■□□□□ 0.21
SCAF8-203ENST00000417268 AKNAQ7Z591 1439 aa16.33■□□□□ 0.21
SCAF8-203ENST00000417268 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.2
SCAF8-203ENST00000417268 NCOA1Q15788 1441 aa16.32■□□□□ 0.2
SCAF8-203ENST00000417268 L1TD1Q5T7N2 865 aaKnown RBP16.31■□□□□ 0.2
SCAF8-203ENST00000417268 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
SCAF8-203ENST00000417268 ATF3P18847 181 aa16.31■□□□□ 0.2
SCAF8-203ENST00000417268 GPATCH8Q9UKJ3 1502 aaKnown RBP16.31■□□□□ 0.2
SCAF8-203ENST00000417268 PTMAP06454 111 aaKnown RBP16.31■□□□□ 0.2
SCAF8-203ENST00000417268 PSME1Q06323 249 aa16.31■□□□□ 0.2
SCAF8-203ENST00000417268 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
SCAF8-203ENST00000417268 ANKRD30BQ9BXX2 1392 aa16.3■□□□□ 0.2
SCAF8-203ENST00000417268 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
SCAF8-203ENST00000417268 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
SCAF8-203ENST00000417268 KIAA0556O60303 1618 aa16.3■□□□□ 0.2
SCAF8-203ENST00000417268 CTTNBP2Q8WZ74 1663 aa16.3■□□□□ 0.2
SCAF8-203ENST00000417268 DNTTIP2Q5QJE6 756 aaKnown RBP16.3■□□□□ 0.2
SCAF8-203ENST00000417268 PLCH2O75038 1416 aa16.29■□□□□ 0.2
SCAF8-203ENST00000417268 NPHP1O15259 732 aa16.29■□□□□ 0.2
SCAF8-203ENST00000417268 WDR97A6NE52 1622 aa16.28■□□□□ 0.2
SCAF8-203ENST00000417268 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
SCAF8-203ENST00000417268 ANKLE2Q86XL3 938 aa16.28■□□□□ 0.2
SCAF8-203ENST00000417268 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
SCAF8-203ENST00000417268 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
SCAF8-203ENST00000417268 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
SCAF8-203ENST00000417268 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.2
SCAF8-203ENST00000417268 TCERG1O14776 1098 aaKnown RBP16.27■□□□□ 0.19
SCAF8-203ENST00000417268 WDR7Q9Y4E6 1490 aa16.26■□□□□ 0.19
SCAF8-203ENST00000417268 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
SCAF8-203ENST00000417268 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms