RNA–Protein interactions for RNA: ENST00000416098.1

NXF4-202, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

BASIC

Gene NXF4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-202ENST00000416098 KDM4FA0A1W2PPD8 638 aa9.77□□□□□ -0.85
NXF4-202ENST00000416098 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
NXF4-202ENST00000416098 EN1Q05925 392 aaPredicted RBP9.76□□□□□ -0.85
NXF4-202ENST00000416098 ERICH6Q7L0X2 663 aa9.76□□□□□ -0.85
NXF4-202ENST00000416098 RBM33Q96EV2 1170 aaKnown RBP9.76□□□□□ -0.85
NXF4-202ENST00000416098 AMHR2Q16671 573 aa9.75□□□□□ -0.85
NXF4-202ENST00000416098 MAP3K7O43318 606 aa9.74□□□□□ -0.85
NXF4-202ENST00000416098 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
NXF4-202ENST00000416098 C14orf37Q86TY3 774 aa9.73□□□□□ -0.85
NXF4-202ENST00000416098 SLAIN1Q8ND83 568 aa9.73□□□□□ -0.85
NXF4-202ENST00000416098 POTEB2H3BUK9 544 aa9.72□□□□□ -0.85
NXF4-202ENST00000416098 TSR1Q2NL82 804 aaKnown RBP9.72□□□□□ -0.85
NXF4-202ENST00000416098 TYW1BQ6NUM6 668 aa9.72□□□□□ -0.85
NXF4-202ENST00000416098 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
NXF4-202ENST00000416098 KHSRPQ92945 711 aaKnown RBP eCLIP9.71□□□□□ -0.86
NXF4-202ENST00000416098 CECR2Q9BXF3 1484 aa9.71□□□□□ -0.86
NXF4-202ENST00000416098 JPH4Q96JJ6 628 aa9.7□□□□□ -0.86
NXF4-202ENST00000416098 HOXB3P14651 431 aaPredicted RBP9.69□□□□□ -0.86
NXF4-202ENST00000416098 FOSBP53539 338 aa9.69□□□□□ -0.86
NXF4-202ENST00000416098 ARSIQ5FYB1 569 aa9.69□□□□□ -0.86
NXF4-202ENST00000416098 PLEKHG3A1L390 1219 aa9.68□□□□□ -0.86
NXF4-202ENST00000416098 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
NXF4-202ENST00000416098 NUDT7P0C024 238 aa9.67□□□□□ -0.86
NXF4-202ENST00000416098 SMARCA4P51532 1647 aa9.66□□□□□ -0.86
NXF4-202ENST00000416098 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
NXF4-202ENST00000416098 REPIN1Q9BWE0 567 aaKnown RBP9.66□□□□□ -0.86
NXF4-202ENST00000416098 BAZ1AQ9NRL2 1556 aaPredicted RBP9.66□□□□□ -0.86
NXF4-202ENST00000416098 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
NXF4-202ENST00000416098 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
NXF4-202ENST00000416098 ZNF454Q8N9F8 522 aa9.66□□□□□ -0.86
NXF4-202ENST00000416098 GPR153Q6NV75 609 aa9.65□□□□□ -0.87
NXF4-202ENST00000416098 ZDHHC16Q969W1 377 aa9.65□□□□□ -0.87
NXF4-202ENST00000416098 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.87
NXF4-202ENST00000416098 PHOX2BQ99453 314 aa9.65□□□□□ -0.87
NXF4-202ENST00000416098 FAM161AQ3B820 660 aa9.63□□□□□ -0.87
NXF4-202ENST00000416098 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
NXF4-202ENST00000416098 MS4A1P11836 297 aa9.62□□□□□ -0.87
NXF4-202ENST00000416098 TMUB1Q9BVT8 246 aa9.62□□□□□ -0.87
NXF4-202ENST00000416098 ADAM33Q9BZ11 813 aa9.62□□□□□ -0.87
NXF4-202ENST00000416098 SMARCA2P51531 1590 aa9.61□□□□□ -0.87
NXF4-202ENST00000416098 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
NXF4-202ENST00000416098 RIMBP2O15034 1052 aa9.6□□□□□ -0.87
NXF4-202ENST00000416098 PADI6Q6TGC4 694 aa9.6□□□□□ -0.87
NXF4-202ENST00000416098 NCAPD3P42695 1498 aa9.6□□□□□ -0.87
NXF4-202ENST00000416098 MDM2Q00987 491 aaPredicted RBP9.59□□□□□ -0.87
NXF4-202ENST00000416098 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
NXF4-202ENST00000416098 SCUBE2Q9NQ36 999 aa9.59□□□□□ -0.87
NXF4-202ENST00000416098 PEG3Q9GZU2 1588 aa9.59□□□□□ -0.87
NXF4-202ENST00000416098 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
NXF4-202ENST00000416098 LHX6Q9UPM6 363 aa9.59□□□□□ -0.87
NXF4-202ENST00000416098 CLCN1P35523 988 aa9.58□□□□□ -0.88
NXF4-202ENST00000416098 MAMSTRQ6ZN01 415 aa9.58□□□□□ -0.88
NXF4-202ENST00000416098 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
NXF4-202ENST00000416098 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
NXF4-202ENST00000416098 TTC13Q8NBP0 860 aa9.58□□□□□ -0.88
NXF4-202ENST00000416098 HMGXB3Q12766 1538 aa9.58□□□□□ -0.88
NXF4-202ENST00000416098 OATP04181 439 aa9.57□□□□□ -0.88
NXF4-202ENST00000416098 NLRP7Q8WX94 980 aa9.57□□□□□ -0.88
NXF4-202ENST00000416098 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
NXF4-202ENST00000416098 ADGRG1Q9Y653 693 aa9.57□□□□□ -0.88
NXF4-202ENST00000416098 MROH2BQ7Z745 1585 aa9.56□□□□□ -0.88
NXF4-202ENST00000416098 SSTR3P32745 418 aaPredicted RBP9.55□□□□□ -0.88
NXF4-202ENST00000416098 PRSS12P56730 875 aa9.55□□□□□ -0.88
NXF4-202ENST00000416098 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
NXF4-202ENST00000416098 HOMEZQ8IX15 550 aa9.54□□□□□ -0.88
NXF4-202ENST00000416098 GOPCQ9HD26 462 aa9.54□□□□□ -0.88
NXF4-202ENST00000416098 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
NXF4-202ENST00000416098 COL9A1P20849 921 aa9.53□□□□□ -0.88
NXF4-202ENST00000416098 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
NXF4-202ENST00000416098 FAM198AQ9UFP1 575 aa9.53□□□□□ -0.88
NXF4-202ENST00000416098 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
NXF4-202ENST00000416098 PPP4R3BQ5MIZ7 849 aa9.52□□□□□ -0.89
NXF4-202ENST00000416098 FAM217BQ9NTX9 383 aaPredicted RBP9.52□□□□□ -0.89
NXF4-202ENST00000416098 BCL2L12Q9HB09 334 aa9.51□□□□□ -0.89
NXF4-202ENST00000416098 SUPT5HO00267 1087 aaKnown RBP9.5□□□□□ -0.89
NXF4-202ENST00000416098 BEGAINQ9BUH8 593 aa9.5□□□□□ -0.89
NXF4-202ENST00000416098 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
NXF4-202ENST00000416098 SNPHO15079 494 aa9.48□□□□□ -0.89
NXF4-202ENST00000416098 HOXB1P14653 301 aaPredicted RBP9.48□□□□□ -0.89
NXF4-202ENST00000416098 RBM46Q8TBY0 533 aaKnown RBP9.48□□□□□ -0.89
NXF4-202ENST00000416098 PCMTD1Q96MG8 357 aaPredicted RBP9.48□□□□□ -0.89
NXF4-202ENST00000416098 WIZO95785 1651 aa9.47□□□□□ -0.89
NXF4-202ENST00000416098 C3orf80F5H4A9 247 aa9.47□□□□□ -0.89
NXF4-202ENST00000416098 SH3D19Q5HYK7 790 aa9.47□□□□□ -0.89
NXF4-202ENST00000416098 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
NXF4-202ENST00000416098 PTPREP23469 700 aa9.47□□□□□ -0.89
NXF4-202ENST00000416098 EYA1Q99502 592 aa9.47□□□□□ -0.89
NXF4-202ENST00000416098 ZMYND15Q9H091 742 aa9.47□□□□□ -0.89
NXF4-202ENST00000416098 RSF1Q96T23 1441 aaPredicted RBP9.45□□□□□ -0.9
NXF4-202ENST00000416098 RCCD1A6NED2 376 aa9.45□□□□□ -0.9
NXF4-202ENST00000416098 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
NXF4-202ENST00000416098 SKIV2LQ15477 1246 aaKnown RBP9.45□□□□□ -0.9
NXF4-202ENST00000416098 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
NXF4-202ENST00000416098 PROCA1Q8NCQ7 364 aaPredicted RBP9.44□□□□□ -0.9
NXF4-202ENST00000416098 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
NXF4-202ENST00000416098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.43□□□□□ -0.9
NXF4-202ENST00000416098 NUDT18Q6ZVK8 323 aa9.43□□□□□ -0.9
NXF4-202ENST00000416098 POLR3EQ9NVU0 708 aa9.43□□□□□ -0.9
NXF4-202ENST00000416098 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
NXF4-202ENST00000416098 TATDN2Q93075 761 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms