RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 IRF6O14896 467 aa13.26□□□□□ -0.29
LINC00343-202ENST00000415294 PTGDRQ13258 359 aa13.25□□□□□ -0.29
LINC00343-202ENST00000415294 KDM4CQ9H3R0 1056 aa13.25□□□□□ -0.29
LINC00343-202ENST00000415294 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
LINC00343-202ENST00000415294 AMHR2Q16671 573 aa13.23□□□□□ -0.29
LINC00343-202ENST00000415294 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
LINC00343-202ENST00000415294 PCDHGA4Q9Y5G9 962 aa13.23□□□□□ -0.29
LINC00343-202ENST00000415294 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
LINC00343-202ENST00000415294 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
LINC00343-202ENST00000415294 GPBP1L1Q9HC44 474 aaPredicted RBP13.22□□□□□ -0.29
LINC00343-202ENST00000415294 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
LINC00343-202ENST00000415294 POTEB3A0JP26 581 aa13.21□□□□□ -0.29
LINC00343-202ENST00000415294 POTEBQ6S5H4 581 aa13.21□□□□□ -0.29
LINC00343-202ENST00000415294 ERBB3P21860 1342 aa13.2□□□□□ -0.3
LINC00343-202ENST00000415294 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
LINC00343-202ENST00000415294 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
LINC00343-202ENST00000415294 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
LINC00343-202ENST00000415294 MAP3K7O43318 606 aa13.17□□□□□ -0.3
LINC00343-202ENST00000415294 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
LINC00343-202ENST00000415294 PCDHGA10Q9Y5H3 936 aa13.16□□□□□ -0.3
LINC00343-202ENST00000415294 GPR153Q6NV75 609 aa13.14□□□□□ -0.31
LINC00343-202ENST00000415294 CERKQ8TCT0 537 aa13.14□□□□□ -0.31
LINC00343-202ENST00000415294 DDRGK1Q96HY6 314 aa13.14□□□□□ -0.31
LINC00343-202ENST00000415294 FECHP22830 423 aa13.13□□□□□ -0.31
LINC00343-202ENST00000415294 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
LINC00343-202ENST00000415294 SPNS2Q8IVW8 549 aa13.13□□□□□ -0.31
LINC00343-202ENST00000415294 KRTAP3-3Q9BYR6 98 aa13.13□□□□□ -0.31
LINC00343-202ENST00000415294 KRTAP3-2Q9BYR7 98 aa13.13□□□□□ -0.31
LINC00343-202ENST00000415294 NPDC1Q9NQX5 325 aaPredicted RBP13.13□□□□□ -0.31
LINC00343-202ENST00000415294 FOSBP53539 338 aa13.12□□□□□ -0.31
LINC00343-202ENST00000415294 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
LINC00343-202ENST00000415294 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
LINC00343-202ENST00000415294 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
LINC00343-202ENST00000415294 PARP9Q8IXQ6 854 aa13.11□□□□□ -0.31
LINC00343-202ENST00000415294 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
LINC00343-202ENST00000415294 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.32
LINC00343-202ENST00000415294 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
LINC00343-202ENST00000415294 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
LINC00343-202ENST00000415294 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00343-202ENST00000415294 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
LINC00343-202ENST00000415294 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
LINC00343-202ENST00000415294 FAM117AQ9C073 453 aa13.05□□□□□ -0.32
LINC00343-202ENST00000415294 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
LINC00343-202ENST00000415294 PSDA5PKW4 1024 aaPredicted RBP13.03□□□□□ -0.32
LINC00343-202ENST00000415294 CLCN1P35523 988 aa13.03□□□□□ -0.32
LINC00343-202ENST00000415294 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
LINC00343-202ENST00000415294 OATP04181 439 aa13.02□□□□□ -0.33
LINC00343-202ENST00000415294 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.33
LINC00343-202ENST00000415294 GOPCQ9HD26 462 aa13.02□□□□□ -0.33
LINC00343-202ENST00000415294 NUDT7P0C024 238 aa13□□□□□ -0.33
LINC00343-202ENST00000415294 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
LINC00343-202ENST00000415294 ZNF687Q8N1G0 1237 aa13□□□□□ -0.33
LINC00343-202ENST00000415294 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
LINC00343-202ENST00000415294 GPCPD1Q9NPB8 672 aa12.98□□□□□ -0.33
LINC00343-202ENST00000415294 TMUB1Q9BVT8 246 aa12.97□□□□□ -0.33
LINC00343-202ENST00000415294 TTC13Q8NBP0 860 aa12.96□□□□□ -0.33
LINC00343-202ENST00000415294 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
LINC00343-202ENST00000415294 METTL3Q86U44 580 aaKnown RBP12.94□□□□□ -0.34
LINC00343-202ENST00000415294 ADAM33Q9BZ11 813 aa12.94□□□□□ -0.34
LINC00343-202ENST00000415294 PADI6Q6TGC4 694 aa12.93□□□□□ -0.34
LINC00343-202ENST00000415294 PRSS12P56730 875 aa12.92□□□□□ -0.34
LINC00343-202ENST00000415294 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
LINC00343-202ENST00000415294 MDM2Q00987 491 aaPredicted RBP12.91□□□□□ -0.34
LINC00343-202ENST00000415294 MS4A1P11836 297 aa12.9□□□□□ -0.34
LINC00343-202ENST00000415294 PXYLP1Q8TE99 480 aa12.9□□□□□ -0.34
LINC00343-202ENST00000415294 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
LINC00343-202ENST00000415294 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
LINC00343-202ENST00000415294 RBM46Q8TBY0 533 aaKnown RBP12.89□□□□□ -0.35
LINC00343-202ENST00000415294 PHOX2BQ99453 314 aa12.89□□□□□ -0.35
LINC00343-202ENST00000415294 REPIN1Q9BWE0 567 aaKnown RBP12.88□□□□□ -0.35
LINC00343-202ENST00000415294 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
LINC00343-202ENST00000415294 CDCA7LQ96GN5 454 aa12.88□□□□□ -0.35
LINC00343-202ENST00000415294 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
LINC00343-202ENST00000415294 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
LINC00343-202ENST00000415294 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
LINC00343-202ENST00000415294 FAM217BQ9NTX9 383 aaPredicted RBP12.86□□□□□ -0.35
LINC00343-202ENST00000415294 PTPREP23469 700 aa12.85□□□□□ -0.35
LINC00343-202ENST00000415294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.84□□□□□ -0.35
LINC00343-202ENST00000415294 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
LINC00343-202ENST00000415294 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
LINC00343-202ENST00000415294 PBX2P40425 430 aa12.83□□□□□ -0.36
LINC00343-202ENST00000415294 FLIIQ13045 1269 aa12.82□□□□□ -0.36
LINC00343-202ENST00000415294 FAM161AQ3B820 660 aa12.82□□□□□ -0.36
LINC00343-202ENST00000415294 LSM11P83369 360 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC00343-202ENST00000415294 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
LINC00343-202ENST00000415294 BEGAINQ9BUH8 593 aa12.81□□□□□ -0.36
LINC00343-202ENST00000415294 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
LINC00343-202ENST00000415294 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
LINC00343-202ENST00000415294 SKIV2LQ15477 1246 aaKnown RBP12.79□□□□□ -0.36
LINC00343-202ENST00000415294 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
LINC00343-202ENST00000415294 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
LINC00343-202ENST00000415294 ONECUT3O60422 494 aaPredicted RBP12.78□□□□□ -0.36
LINC00343-202ENST00000415294 COL9A1P20849 921 aa12.78□□□□□ -0.36
LINC00343-202ENST00000415294 EYA1Q99502 592 aa12.77□□□□□ -0.37
LINC00343-202ENST00000415294 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
LINC00343-202ENST00000415294 PACS2Q86VP3 889 aa12.76□□□□□ -0.37
LINC00343-202ENST00000415294 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
LINC00343-202ENST00000415294 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
LINC00343-202ENST00000415294 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
LINC00343-202ENST00000415294 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms