RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 SETD5Q9C0A6 1442 aa14.8□□□□□ -0.04
DDB1-202ENST00000414411 ARHGEF40Q8TER5 1519 aa14.8□□□□□ -0.04
DDB1-202ENST00000414411 A2MP01023 1474 aa14.8□□□□□ -0.04
DDB1-202ENST00000414411 ANKRD50Q9ULJ7 1429 aa14.8□□□□□ -0.04
DDB1-202ENST00000414411 GCC2Q8IWJ2 1684 aa14.8□□□□□ -0.04
DDB1-202ENST00000414411 CCER1Q8TC90 406 aaPredicted RBP14.79□□□□□ -0.04
DDB1-202ENST00000414411 REREQ9P2R6 1566 aa14.78□□□□□ -0.04
DDB1-202ENST00000414411 ERBINQ96RT1 1412 aa14.77□□□□□ -0.04
DDB1-202ENST00000414411 RAB3GAP2Q9H2M9 1393 aa14.76□□□□□ -0.05
DDB1-202ENST00000414411 MSH5O43196 834 aa14.75□□□□□ -0.05
DDB1-202ENST00000414411 SIGLEC1Q9BZZ2 1709 aa14.75□□□□□ -0.05
DDB1-202ENST00000414411 AGLP35573 1532 aa14.74□□□□□ -0.05
DDB1-202ENST00000414411 BCORL1Q5H9F3 1711 aa14.74□□□□□ -0.05
DDB1-202ENST00000414411 EIF2AK4Q9P2K8 1649 aaKnown RBP14.73□□□□□ -0.05
DDB1-202ENST00000414411 KIF3BO15066 747 aa14.73□□□□□ -0.05
DDB1-202ENST00000414411 ACIN1Q9UKV3 1341 aaKnown RBP14.7□□□□□ -0.06
DDB1-202ENST00000414411 DEPDC5O75140 1603 aa14.69□□□□□ -0.06
DDB1-202ENST00000414411 RNF17Q9BXT8 1623 aaKnown RBP14.69□□□□□ -0.06
DDB1-202ENST00000414411 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
DDB1-202ENST00000414411 MROH1Q8NDA8 1641 aa14.68□□□□□ -0.06
DDB1-202ENST00000414411 UNC13BO14795 1591 aa14.68□□□□□ -0.06
DDB1-202ENST00000414411 GGT6Q6P531 493 aa14.67□□□□□ -0.06
DDB1-202ENST00000414411 NUP155O75694 1391 aa14.66□□□□□ -0.06
DDB1-202ENST00000414411 ARID4BQ4LE39 1312 aaPredicted RBP14.66□□□□□ -0.06
DDB1-202ENST00000414411 VWDEQ8N2E2 1590 aa14.65□□□□□ -0.06
DDB1-202ENST00000414411 PRDM15P57071 1507 aaPredicted RBP14.65□□□□□ -0.06
DDB1-202ENST00000414411 TRIM52Q96A61 297 aa14.65□□□□□ -0.06
DDB1-202ENST00000414411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
DDB1-202ENST00000414411 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
DDB1-202ENST00000414411 KDM5DQ9BY66 1539 aa14.64□□□□□ -0.07
DDB1-202ENST00000414411 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
DDB1-202ENST00000414411 MLECQ14165 292 aa14.62□□□□□ -0.07
DDB1-202ENST00000414411 PZPP20742 1482 aa14.62□□□□□ -0.07
DDB1-202ENST00000414411 IQGAP3Q86VI3 1631 aa14.62□□□□□ -0.07
DDB1-202ENST00000414411 MPHOSPH9Q99550 1183 aa14.61□□□□□ -0.07
DDB1-202ENST00000414411 KANK1Q14678 1352 aa14.61□□□□□ -0.07
DDB1-202ENST00000414411 FAM135AQ9P2D6 1515 aa14.61□□□□□ -0.07
DDB1-202ENST00000414411 LMTK2Q8IWU2 1503 aa14.6□□□□□ -0.07
DDB1-202ENST00000414411 WASHC2CQ9Y4E1 1318 aa14.6□□□□□ -0.07
DDB1-202ENST00000414411 DAXXQ9UER7 740 aaPredicted RBP14.6□□□□□ -0.07
DDB1-202ENST00000414411 ABCC3O15438 1527 aa14.59□□□□□ -0.07
DDB1-202ENST00000414411 DHX57Q6P158 1386 aaKnown RBP14.58□□□□□ -0.08
DDB1-202ENST00000414411 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
DDB1-202ENST00000414411 CEP152O94986 1710 aa14.57□□□□□ -0.08
DDB1-202ENST00000414411 ADAMTSL3P82987 1691 aa14.57□□□□□ -0.08
DDB1-202ENST00000414411 ZC3H13Q5T200 1668 aaKnown RBP14.57□□□□□ -0.08
DDB1-202ENST00000414411 TET3O43151 1660 aa14.56□□□□□ -0.08
DDB1-202ENST00000414411 PKD2Q13563 968 aa14.56□□□□□ -0.08
DDB1-202ENST00000414411 ARHGAP31Q2M1Z3 1444 aa14.55□□□□□ -0.08
DDB1-202ENST00000414411 CLTCQ00610 1675 aaKnown RBP14.55□□□□□ -0.08
DDB1-202ENST00000414411 CNTLNQ9NXG0 1405 aa14.54□□□□□ -0.08
DDB1-202ENST00000414411 EFCAB6Q5THR3 1501 aa14.54□□□□□ -0.08
DDB1-202ENST00000414411 ESF1Q9H501 851 aaKnown RBP14.53□□□□□ -0.08
DDB1-202ENST00000414411 ZMYM3Q14202 1370 aa14.53□□□□□ -0.08
DDB1-202ENST00000414411 CAMSAP1Q5T5Y3 1602 aa14.53□□□□□ -0.08
DDB1-202ENST00000414411 E9PCH4 1651 aa14.53□□□□□ -0.08
DDB1-202ENST00000414411 FER1L4A9Z1Z3 1794 aa14.53□□□□□ -0.08
DDB1-202ENST00000414411 NPATQ14207 1427 aa14.53□□□□□ -0.08
DDB1-202ENST00000414411 MADDQ8WXG6 1647 aa14.51□□□□□ -0.09
DDB1-202ENST00000414411 RPRD2Q5VT52 1461 aaKnown RBP14.51□□□□□ -0.09
DDB1-202ENST00000414411 MROH2AA6NES4 1674 aa14.51□□□□□ -0.09
DDB1-202ENST00000414411 CFAP65Q6ZU64 1925 aaKnown RBP14.5□□□□□ -0.09
DDB1-202ENST00000414411 ANKRD30BQ9BXX2 1392 aa14.49□□□□□ -0.09
DDB1-202ENST00000414411 PLA2R1Q13018 1463 aa14.49□□□□□ -0.09
DDB1-202ENST00000414411 PTPRTO14522 1441 aa14.49□□□□□ -0.09
DDB1-202ENST00000414411 KDM4FA0A1W2PPD8 638 aa14.49□□□□□ -0.09
DDB1-202ENST00000414411 FBXO31Q5XUX0 539 aaPredicted RBP14.48□□□□□ -0.09
DDB1-202ENST00000414411 NOS1P29475 1434 aa14.47□□□□□ -0.09
DDB1-202ENST00000414411 RIMS1Q86UR5 1692 aaKnown RBP14.47□□□□□ -0.09
DDB1-202ENST00000414411 CEBPAP49715 358 aaPredicted RBP14.47□□□□□ -0.09
DDB1-202ENST00000414411 C3P01024 1663 aa14.46□□□□□ -0.09
DDB1-202ENST00000414411 CLSPNQ9HAW4 1339 aa14.46□□□□□ -0.09
DDB1-202ENST00000414411 ZBTB22O15209 634 aa14.45□□□□□ -0.1
DDB1-202ENST00000414411 PREX1Q8TCU6 1659 aa14.44□□□□□ -0.1
DDB1-202ENST00000414411 SPHKAPQ2M3C7 1700 aa14.44□□□□□ -0.1
DDB1-202ENST00000414411 SPATA31D1Q6ZQQ2 1576 aa14.44□□□□□ -0.1
DDB1-202ENST00000414411 PTPRMP28827 1452 aa14.44□□□□□ -0.1
DDB1-202ENST00000414411 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
DDB1-202ENST00000414411 TRPM2O94759 1503 aa14.43□□□□□ -0.1
DDB1-202ENST00000414411 SYNMO15061 1565 aa14.42□□□□□ -0.1
DDB1-202ENST00000414411 SIN3AQ96ST3 1273 aa14.41□□□□□ -0.1
DDB1-202ENST00000414411 SETD1BQ9UPS6 1966 aaKnown RBP14.41□□□□□ -0.1
DDB1-202ENST00000414411 SLC52A1Q9NWF4 448 aa14.41□□□□□ -0.1
DDB1-202ENST00000414411 IDI1Q13907 227 aa14.39□□□□□ -0.11
DDB1-202ENST00000414411 PIK3C2BO00750 1634 aa14.39□□□□□ -0.11
DDB1-202ENST00000414411 TNRQ92752 1358 aa14.39□□□□□ -0.11
DDB1-202ENST00000414411 CCDC144AA2RUR9 1427 aa14.39□□□□□ -0.11
DDB1-202ENST00000414411 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
DDB1-202ENST00000414411 UGGT1Q9NYU2 1555 aa14.39□□□□□ -0.11
DDB1-202ENST00000414411 CLTCL1P53675 1640 aa14.37□□□□□ -0.11
DDB1-202ENST00000414411 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
DDB1-202ENST00000414411 NEUROD1Q13562 356 aa14.35□□□□□ -0.11
DDB1-202ENST00000414411 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
DDB1-202ENST00000414411 SPATA31E1Q6ZUB1 1445 aa14.34□□□□□ -0.11
DDB1-202ENST00000414411 KIF1BO60333 1816 aa14.32□□□□□ -0.12
DDB1-202ENST00000414411 NEURL4Q96JN8 1562 aa14.32□□□□□ -0.12
DDB1-202ENST00000414411 TMEM131LA2VDJ0 1609 aa14.32□□□□□ -0.12
DDB1-202ENST00000414411 MYO3AQ8NEV4 1616 aa14.31□□□□□ -0.12
DDB1-202ENST00000414411 AMER1Q5JTC6 1135 aaPredicted RBP14.3□□□□□ -0.12
DDB1-202ENST00000414411 TIMELESSQ9UNS1 1208 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 614 ms