RNA–Protein interactions for RNA: ENST00000411496.1

TTC3-205, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-205ENST00000411496 SLC24A3Q9HC58 644 aa11.66□□□□□ -0.54
TTC3-205ENST00000411496 ADAM33Q9BZ11 813 aa11.64□□□□□ -0.55
TTC3-205ENST00000411496 NPDC1Q9NQX5 325 aaPredicted RBP11.64□□□□□ -0.55
TTC3-205ENST00000411496 MAP2K5Q13163 448 aa11.63□□□□□ -0.55
TTC3-205ENST00000411496 TSR1Q2NL82 804 aaKnown RBP11.63□□□□□ -0.55
TTC3-205ENST00000411496 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
TTC3-205ENST00000411496 ST18O60284 1047 aa11.62□□□□□ -0.55
TTC3-205ENST00000411496 CDHR5Q9HBB8 845 aa11.61□□□□□ -0.55
TTC3-205ENST00000411496 IRF6O14896 467 aa11.6□□□□□ -0.55
TTC3-205ENST00000411496 ERBB3P21860 1342 aa11.59□□□□□ -0.55
TTC3-205ENST00000411496 PTPREP23469 700 aa11.58□□□□□ -0.56
TTC3-205ENST00000411496 RBM27Q9P2N5 1060 aaKnown RBP11.58□□□□□ -0.56
TTC3-205ENST00000411496 KCNH8Q96L42 1107 aa11.57□□□□□ -0.56
TTC3-205ENST00000411496 FECHP22830 423 aa11.56□□□□□ -0.56
TTC3-205ENST00000411496 FAM163AQ96GL9 167 aaPredicted RBP11.56□□□□□ -0.56
TTC3-205ENST00000411496 EMP3P54852 163 aa11.55□□□□□ -0.56
TTC3-205ENST00000411496 PPP1R3GB7ZBB8 358 aa11.54□□□□□ -0.56
TTC3-205ENST00000411496 TRIM66O15016 1216 aa11.54□□□□□ -0.56
TTC3-205ENST00000411496 PRSS12P56730 875 aa11.53□□□□□ -0.56
TTC3-205ENST00000411496 CCDC102AQ96A19 550 aa11.53□□□□□ -0.56
TTC3-205ENST00000411496 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
TTC3-205ENST00000411496 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
TTC3-205ENST00000411496 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
TTC3-205ENST00000411496 CDCA7LQ96GN5 454 aa11.51□□□□□ -0.57
TTC3-205ENST00000411496 OATP04181 439 aa11.5□□□□□ -0.57
TTC3-205ENST00000411496 MARVELD3Q96A59 401 aa11.5□□□□□ -0.57
TTC3-205ENST00000411496 COL9A1P20849 921 aa11.49□□□□□ -0.57
TTC3-205ENST00000411496 PBX2P40425 430 aa11.49□□□□□ -0.57
TTC3-205ENST00000411496 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
TTC3-205ENST00000411496 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
TTC3-205ENST00000411496 ARHGAP33O14559 1287 aa11.48□□□□□ -0.57
TTC3-205ENST00000411496 ONECUT3O60422 494 aaPredicted RBP11.48□□□□□ -0.57
TTC3-205ENST00000411496 PDE4DQ08499 809 aa11.48□□□□□ -0.57
TTC3-205ENST00000411496 AMHR2Q16671 573 aa11.48□□□□□ -0.57
TTC3-205ENST00000411496 ZNF687Q8N1G0 1237 aa11.48□□□□□ -0.57
TTC3-205ENST00000411496 KCNK17Q96T54 332 aa11.48□□□□□ -0.57
TTC3-205ENST00000411496 FAM205CA6NFA0 338 aa11.47□□□□□ -0.57
TTC3-205ENST00000411496 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
TTC3-205ENST00000411496 ADGRG1Q9Y653 693 aa11.45□□□□□ -0.58
TTC3-205ENST00000411496 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
TTC3-205ENST00000411496 SLC4A5Q9BY07 1137 aa11.44□□□□□ -0.58
TTC3-205ENST00000411496 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
TTC3-205ENST00000411496 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
TTC3-205ENST00000411496 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
TTC3-205ENST00000411496 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
TTC3-205ENST00000411496 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
TTC3-205ENST00000411496 PXYLP1Q8TE99 480 aa11.41□□□□□ -0.58
TTC3-205ENST00000411496 ZBED2Q9BTP6 218 aa11.41□□□□□ -0.58
TTC3-205ENST00000411496 TSKSQ9UJT2 592 aa11.41□□□□□ -0.58
TTC3-205ENST00000411496 NBPF26B4DH59 902 aa11.4□□□□□ -0.58
TTC3-205ENST00000411496 PSEN2P49810 448 aa11.4□□□□□ -0.58
TTC3-205ENST00000411496 CLCN1P35523 988 aa11.39□□□□□ -0.59
TTC3-205ENST00000411496 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
TTC3-205ENST00000411496 POTEEQ6S8J3 1075 aa11.39□□□□□ -0.59
TTC3-205ENST00000411496 KDM4CQ9H3R0 1056 aa11.39□□□□□ -0.59
TTC3-205ENST00000411496 FAM198AQ9UFP1 575 aa11.39□□□□□ -0.59
TTC3-205ENST00000411496 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
TTC3-205ENST00000411496 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
TTC3-205ENST00000411496 TATDN2Q93075 761 aa11.37□□□□□ -0.59
TTC3-205ENST00000411496 EYA1Q99502 592 aa11.37□□□□□ -0.59
TTC3-205ENST00000411496 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
TTC3-205ENST00000411496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.36□□□□□ -0.59
TTC3-205ENST00000411496 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
TTC3-205ENST00000411496 PARP9Q8IXQ6 854 aa11.36□□□□□ -0.59
TTC3-205ENST00000411496 PHOX2BQ99453 314 aa11.36□□□□□ -0.59
TTC3-205ENST00000411496 GPBP1L1Q9HC44 474 aaPredicted RBP11.36□□□□□ -0.59
TTC3-205ENST00000411496 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
TTC3-205ENST00000411496 POTEB3A0JP26 581 aa11.35□□□□□ -0.59
TTC3-205ENST00000411496 POTEBQ6S5H4 581 aa11.35□□□□□ -0.59
TTC3-205ENST00000411496 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
TTC3-205ENST00000411496 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
TTC3-205ENST00000411496 GPCPD1Q9NPB8 672 aa11.35□□□□□ -0.59
TTC3-205ENST00000411496 KIAA1468Q9P260 1216 aa11.35□□□□□ -0.59
TTC3-205ENST00000411496 PNMA3Q9UL41 463 aa11.35□□□□□ -0.59
TTC3-205ENST00000411496 TK2O00142 265 aa11.34□□□□□ -0.59
TTC3-205ENST00000411496 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
TTC3-205ENST00000411496 MDM2Q00987 491 aaPredicted RBP11.33□□□□□ -0.6
TTC3-205ENST00000411496 VPS9D1Q9Y2B5 631 aa11.33□□□□□ -0.6
TTC3-205ENST00000411496 RCCD1A6NED2 376 aa11.32□□□□□ -0.6
TTC3-205ENST00000411496 DNAJB2P25686 324 aa11.31□□□□□ -0.6
TTC3-205ENST00000411496 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
TTC3-205ENST00000411496 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
TTC3-205ENST00000411496 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
TTC3-205ENST00000411496 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
TTC3-205ENST00000411496 C3orf80F5H4A9 247 aa11.28□□□□□ -0.6
TTC3-205ENST00000411496 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
TTC3-205ENST00000411496 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
TTC3-205ENST00000411496 SSTR3P32745 418 aaPredicted RBP11.27□□□□□ -0.61
TTC3-205ENST00000411496 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
TTC3-205ENST00000411496 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.61
TTC3-205ENST00000411496 HDGFP51858 240 aaKnown RBP11.26□□□□□ -0.61
TTC3-205ENST00000411496 FAM98CQ17RN3 349 aaKnown RBP11.26□□□□□ -0.61
TTC3-205ENST00000411496 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
TTC3-205ENST00000411496 SMAPO00193 183 aa11.25□□□□□ -0.61
TTC3-205ENST00000411496 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
TTC3-205ENST00000411496 IL27Q8NEV9 243 aa11.25□□□□□ -0.61
TTC3-205ENST00000411496 FAM117AQ9C073 453 aa11.25□□□□□ -0.61
TTC3-205ENST00000411496 ADGRD1Q6QNK2 874 aa11.24□□□□□ -0.61
TTC3-205ENST00000411496 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
TTC3-205ENST00000411496 MS4A1P11836 297 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms