RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 EPAS1Q99814 870 aa9.45□□□□□ -0.9
LSM5-205ENST00000409952 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
LSM5-205ENST00000409952 FBXW7Q969H0 707 aa9.44□□□□□ -0.9
LSM5-205ENST00000409952 ADAM33Q9BZ11 813 aa9.44□□□□□ -0.9
LSM5-205ENST00000409952 ANKRD13DQ6ZTN6 518 aa9.43□□□□□ -0.9
LSM5-205ENST00000409952 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
LSM5-205ENST00000409952 DDX12PQ92771 950 aa9.42□□□□□ -0.9
LSM5-205ENST00000409952 PSEN2P49810 448 aa9.41□□□□□ -0.9
LSM5-205ENST00000409952 TMEM132AQ24JP5 1023 aa9.41□□□□□ -0.9
LSM5-205ENST00000409952 DMRTA1Q5VZB9 504 aa9.41□□□□□ -0.9
LSM5-205ENST00000409952 OSBPP22059 807 aa9.4□□□□□ -0.9
LSM5-205ENST00000409952 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
LSM5-205ENST00000409952 HOMEZQ8IX15 550 aa9.4□□□□□ -0.9
LSM5-205ENST00000409952 EN1Q05925 392 aaPredicted RBP9.39□□□□□ -0.91
LSM5-205ENST00000409952 SLC4A5Q9BY07 1137 aa9.39□□□□□ -0.91
LSM5-205ENST00000409952 TK2O00142 265 aa9.38□□□□□ -0.91
LSM5-205ENST00000409952 PTPREP23469 700 aa9.38□□□□□ -0.91
LSM5-205ENST00000409952 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
LSM5-205ENST00000409952 MLLT3P42568 568 aaPredicted RBP9.37□□□□□ -0.91
LSM5-205ENST00000409952 C6orf132Q5T0Z8 1188 aa9.37□□□□□ -0.91
LSM5-205ENST00000409952 TESPA1A2RU30 521 aaPredicted RBP9.36□□□□□ -0.91
LSM5-205ENST00000409952 SEMA3EO15041 775 aa9.36□□□□□ -0.91
LSM5-205ENST00000409952 KCNK17Q96T54 332 aa9.36□□□□□ -0.91
LSM5-205ENST00000409952 PPP1R3GB7ZBB8 358 aa9.35□□□□□ -0.91
LSM5-205ENST00000409952 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
LSM5-205ENST00000409952 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
LSM5-205ENST00000409952 HRO43593 1189 aa9.33□□□□□ -0.92
LSM5-205ENST00000409952 COL9A1P20849 921 aa9.33□□□□□ -0.92
LSM5-205ENST00000409952 ADGRD1Q6QNK2 874 aa9.33□□□□□ -0.92
LSM5-205ENST00000409952 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
LSM5-205ENST00000409952 KCNH8Q96L42 1107 aa9.32□□□□□ -0.92
LSM5-205ENST00000409952 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
LSM5-205ENST00000409952 TSR1Q2NL82 804 aaKnown RBP9.31□□□□□ -0.92
LSM5-205ENST00000409952 MAP3K7O43318 606 aa9.3□□□□□ -0.92
LSM5-205ENST00000409952 RBM33Q96EV2 1170 aaKnown RBP9.3□□□□□ -0.92
LSM5-205ENST00000409952 BHMG1C9JSJ3 638 aaPredicted RBP9.29□□□□□ -0.92
LSM5-205ENST00000409952 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
LSM5-205ENST00000409952 NPDC1Q9NQX5 325 aaPredicted RBP9.28□□□□□ -0.92
LSM5-205ENST00000409952 CERKQ8TCT0 537 aa9.27□□□□□ -0.93
LSM5-205ENST00000409952 CDHR5Q9HBB8 845 aa9.26□□□□□ -0.93
LSM5-205ENST00000409952 TTC13Q8NBP0 860 aa9.25□□□□□ -0.93
LSM5-205ENST00000409952 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
LSM5-205ENST00000409952 PROX2Q3B8N5 592 aa9.24□□□□□ -0.93
LSM5-205ENST00000409952 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
LSM5-205ENST00000409952 RABGEF1Q9UJ41 708 aa9.24□□□□□ -0.93
LSM5-205ENST00000409952 TRIM6-TRIM34B2RNG4 842 aa9.23□□□□□ -0.93
LSM5-205ENST00000409952 PRSS12P56730 875 aa9.22□□□□□ -0.93
LSM5-205ENST00000409952 PTGDRQ13258 359 aa9.22□□□□□ -0.93
LSM5-205ENST00000409952 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.94
LSM5-205ENST00000409952 FAM198AQ9UFP1 575 aa9.21□□□□□ -0.94
LSM5-205ENST00000409952 TSKSQ9UJT2 592 aa9.21□□□□□ -0.94
LSM5-205ENST00000409952 GPR37O15354 613 aa9.2□□□□□ -0.94
LSM5-205ENST00000409952 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
LSM5-205ENST00000409952 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
LSM5-205ENST00000409952 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
LSM5-205ENST00000409952 NBPF3Q9H094 633 aa9.17□□□□□ -0.94
LSM5-205ENST00000409952 C3orf80F5H4A9 247 aa9.15□□□□□ -0.94
LSM5-205ENST00000409952 FCHSD2O94868 740 aa9.15□□□□□ -0.94
LSM5-205ENST00000409952 NUTM2FA1L443 756 aa9.14□□□□□ -0.95
LSM5-205ENST00000409952 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
LSM5-205ENST00000409952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.14□□□□□ -0.95
LSM5-205ENST00000409952 PACS2Q86VP3 889 aa9.14□□□□□ -0.95
LSM5-205ENST00000409952 MRPL50Q8N5N7 158 aaKnown RBP9.14□□□□□ -0.95
LSM5-205ENST00000409952 HIC1Q14526 733 aa9.12□□□□□ -0.95
LSM5-205ENST00000409952 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
LSM5-205ENST00000409952 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
LSM5-205ENST00000409952 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
LSM5-205ENST00000409952 TATDN2Q93075 761 aa9.11□□□□□ -0.95
LSM5-205ENST00000409952 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
LSM5-205ENST00000409952 EYA1Q99502 592 aa9.1□□□□□ -0.95
LSM5-205ENST00000409952 GNPATO15228 680 aa9.09□□□□□ -0.95
LSM5-205ENST00000409952 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
LSM5-205ENST00000409952 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
LSM5-205ENST00000409952 SEPT9Q9UHD8 586 aaPredicted RBP9.09□□□□□ -0.95
LSM5-205ENST00000409952 NUDT18Q6ZVK8 323 aa9.08□□□□□ -0.96
LSM5-205ENST00000409952 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
LSM5-205ENST00000409952 ADGRG1Q9Y653 693 aa9.08□□□□□ -0.96
LSM5-205ENST00000409952 THSD4Q6ZMP0 1018 aa9.07□□□□□ -0.96
LSM5-205ENST00000409952 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
LSM5-205ENST00000409952 PNMA3Q9UL41 463 aa9.07□□□□□ -0.96
LSM5-205ENST00000409952 SMAPO00193 183 aa9.06□□□□□ -0.96
LSM5-205ENST00000409952 FECHP22830 423 aa9.06□□□□□ -0.96
LSM5-205ENST00000409952 LMOD2Q6P5Q4 547 aa9.06□□□□□ -0.96
LSM5-205ENST00000409952 WNT2BQ93097 391 aa9.06□□□□□ -0.96
LSM5-205ENST00000409952 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
LSM5-205ENST00000409952 BRPF1P55201 1214 aaPredicted RBP9.05□□□□□ -0.96
LSM5-205ENST00000409952 PTPN5P54829 565 aa9.04□□□□□ -0.96
LSM5-205ENST00000409952 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
LSM5-205ENST00000409952 GOLGA8CPA6NN73 597 aa9.03□□□□□ -0.96
LSM5-205ENST00000409952 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
LSM5-205ENST00000409952 PXYLP1Q8TE99 480 aa9.02□□□□□ -0.97
LSM5-205ENST00000409952 OATP04181 439 aa9.01□□□□□ -0.97
LSM5-205ENST00000409952 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
LSM5-205ENST00000409952 FAM161AQ3B820 660 aa9□□□□□ -0.97
LSM5-205ENST00000409952 METTL3Q86U44 580 aaKnown RBP9□□□□□ -0.97
LSM5-205ENST00000409952 BCAMP50895 628 aa8.99□□□□□ -0.97
LSM5-205ENST00000409952 MAP2K5Q13163 448 aa8.99□□□□□ -0.97
LSM5-205ENST00000409952 SAMD7Q7Z3H4 446 aa8.99□□□□□ -0.97
LSM5-205ENST00000409952 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.99□□□□□ -0.97
LSM5-205ENST00000409952 PODXL2Q9NZ53 605 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms