RNA–Protein interactions for RNA: ENST00000409892.5

RAB1A-204, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB1A, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-204ENST00000409892 SLKQ9H2G2 1235 aaPredicted RBP22.87■■□□□ 1.25
RAB1A-204ENST00000409892 HS1BP3Q53T59 392 aa22.87■■□□□ 1.25
RAB1A-204ENST00000409892 DNAJC2Q99543 621 aaKnown RBP22.87■■□□□ 1.25
RAB1A-204ENST00000409892 RAPGEF2Q9Y4G8 1499 aa22.87■■□□□ 1.25
RAB1A-204ENST00000409892 SKAP1Q86WV1 359 aa22.85■■□□□ 1.25
RAB1A-204ENST00000409892 CSPP1Q1MSJ5 1256 aa22.84■■□□□ 1.25
RAB1A-204ENST00000409892 ARID3AQ99856 593 aa22.84■■□□□ 1.25
RAB1A-204ENST00000409892 USP19O94966 1318 aa22.83■■□□□ 1.25
RAB1A-204ENST00000409892 SASS6Q6UVJ0 657 aa22.83■■□□□ 1.25
RAB1A-204ENST00000409892 EIF4G2P78344 907 aaKnown RBP eCLIP22.82■■□□□ 1.24
RAB1A-204ENST00000409892 DDX11L8A8MPP1 907 aa22.8■■□□□ 1.24
RAB1A-204ENST00000409892 IRX5P78411 483 aaPredicted RBP22.8■■□□□ 1.24
RAB1A-204ENST00000409892 CGNQ9P2M7 1197 aaKnown RBP22.8■■□□□ 1.24
RAB1A-204ENST00000409892 CNKSR2Q8WXI2 1034 aa22.8■■□□□ 1.24
RAB1A-204ENST00000409892 CLGNO14967 610 aa22.79■■□□□ 1.24
RAB1A-204ENST00000409892 TMC1Q8TDI8 760 aa22.79■■□□□ 1.24
RAB1A-204ENST00000409892 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
RAB1A-204ENST00000409892 ZBTB22O15209 634 aa22.77■■□□□ 1.24
RAB1A-204ENST00000409892 PDE3BQ13370 1112 aa22.76■■□□□ 1.23
RAB1A-204ENST00000409892 HAP1P54257 671 aaPredicted RBP22.74■■□□□ 1.23
RAB1A-204ENST00000409892 HSP90B1P14625 803 aaKnown RBP22.74■■□□□ 1.23
RAB1A-204ENST00000409892 NOL7Q9UMY1 257 aaKnown RBP22.74■■□□□ 1.23
RAB1A-204ENST00000409892 CBX1P83916 185 aa22.73■■□□□ 1.23
RAB1A-204ENST00000409892 CRBNQ96SW2 442 aa22.73■■□□□ 1.23
RAB1A-204ENST00000409892 LRPPRCP42704 1394 aaKnown RBP22.73■■□□□ 1.23
RAB1A-204ENST00000409892 NLRP1Q9C000 1473 aa22.73■■□□□ 1.23
RAB1A-204ENST00000409892 YY1AP1Q9H869 796 aa22.72■■□□□ 1.23
RAB1A-204ENST00000409892 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
RAB1A-204ENST00000409892 SCAPERQ9BY12 1400 aa22.71■■□□□ 1.23
RAB1A-204ENST00000409892 MCM5P33992 734 aa22.7■■□□□ 1.22
RAB1A-204ENST00000409892 AXDND1Q5T1B0 1012 aaPredicted RBP22.7■■□□□ 1.22
RAB1A-204ENST00000409892 CHMP5Q9NZZ3 219 aa22.7■■□□□ 1.22
RAB1A-204ENST00000409892 GAS2L3Q86XJ1 694 aa22.7■■□□□ 1.22
RAB1A-204ENST00000409892 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
RAB1A-204ENST00000409892 PSEN1P49768 467 aa22.69■■□□□ 1.22
RAB1A-204ENST00000409892 CNPY4Q8N129 248 aa22.69■■□□□ 1.22
RAB1A-204ENST00000409892 HDAC5Q9UQL6 1122 aa22.69■■□□□ 1.22
RAB1A-204ENST00000409892 E9PSI1 815 aa22.69■■□□□ 1.22
RAB1A-204ENST00000409892 KCNG1Q9UIX4 513 aa22.68■■□□□ 1.22
RAB1A-204ENST00000409892 NBPF1Q3BBV0 1214 aa22.68■■□□□ 1.22
RAB1A-204ENST00000409892 ZNF622Q969S3 477 aaKnown RBP eCLIP22.66■■□□□ 1.22
RAB1A-204ENST00000409892 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
RAB1A-204ENST00000409892 NASPP49321 788 aaPredicted RBP22.65■■□□□ 1.22
RAB1A-204ENST00000409892 MYRIPQ8NFW9 859 aa22.65■■□□□ 1.22
RAB1A-204ENST00000409892 PTMSP20962 102 aa22.65■■□□□ 1.22
RAB1A-204ENST00000409892 ATP2B3Q16720 1220 aa22.64■■□□□ 1.22
RAB1A-204ENST00000409892 SKOR2Q2VWA4 1001 aaPredicted RBP22.64■■□□□ 1.22
RAB1A-204ENST00000409892 GEMIN8Q9NWZ8 242 aaKnown RBP22.64■■□□□ 1.21
RAB1A-204ENST00000409892 CCDC144AA2RUR9 1427 aa22.64■■□□□ 1.21
RAB1A-204ENST00000409892 UACAQ9BZF9 1416 aa22.64■■□□□ 1.21
RAB1A-204ENST00000409892 TBC1D2Q9BYX2 928 aa22.63■■□□□ 1.21
RAB1A-204ENST00000409892 KCNJ4P48050 445 aa22.62■■□□□ 1.21
RAB1A-204ENST00000409892 XPCQ01831 940 aaPredicted RBP22.62■■□□□ 1.21
RAB1A-204ENST00000409892 TSPYL1Q9H0U9 437 aa22.62■■□□□ 1.21
RAB1A-204ENST00000409892 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
RAB1A-204ENST00000409892 IBTKQ9P2D0 1353 aaPredicted RBP22.61■■□□□ 1.21
RAB1A-204ENST00000409892 NINLQ9Y2I6 1382 aa22.61■■□□□ 1.21
RAB1A-204ENST00000409892 CCDC66A2RUB6 948 aa22.61■■□□□ 1.21
RAB1A-204ENST00000409892 GTF2F1P35269 517 aaKnown RBP eCLIP22.61■■□□□ 1.218e-9■■■■■ 35.3
RAB1A-204ENST00000409892 ZNF710Q8N1W2 664 aa22.6■■□□□ 1.21
RAB1A-204ENST00000409892 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.6■■□□□ 1.21
RAB1A-204ENST00000409892 ZNF771Q7L3S4 317 aaPredicted RBP22.6■■□□□ 1.21
RAB1A-204ENST00000409892 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
RAB1A-204ENST00000409892 WWC1Q8IX03 1113 aa22.59■■□□□ 1.21
RAB1A-204ENST00000409892 ZKSCAN5Q9Y2L8 839 aa22.59■■□□□ 1.21
RAB1A-204ENST00000409892 TULP1O00294 542 aaPredicted RBP22.59■■□□□ 1.21
RAB1A-204ENST00000409892 AMER1Q5JTC6 1135 aaPredicted RBP22.59■■□□□ 1.21
RAB1A-204ENST00000409892 SOX12O15370 315 aa22.58■■□□□ 1.21
RAB1A-204ENST00000409892 MAPK8IP2Q13387 824 aaPredicted RBP22.58■■□□□ 1.21
RAB1A-204ENST00000409892 KIF7Q2M1P5 1343 aa22.57■■□□□ 1.2
RAB1A-204ENST00000409892 TULP2O00295 520 aa22.57■■□□□ 1.2
RAB1A-204ENST00000409892 GABPB1Q06547 395 aaPredicted RBP22.57■■□□□ 1.2
RAB1A-204ENST00000409892 PRIMPOLQ96LW4 560 aa22.56■■□□□ 1.2
RAB1A-204ENST00000409892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.56■■□□□ 1.2
RAB1A-204ENST00000409892 RBM25P49756 843 aaKnown RBP22.56■■□□□ 1.2
RAB1A-204ENST00000409892 ROCK2O75116 1388 aaKnown RBP22.55■■□□□ 1.2
RAB1A-204ENST00000409892 TIGD1Q96MW7 591 aa22.55■■□□□ 1.2
RAB1A-204ENST00000409892 CERS3Q8IU89 383 aa22.55■■□□□ 1.2
RAB1A-204ENST00000409892 PDLIM2Q96JY6 352 aa22.55■■□□□ 1.2
RAB1A-204ENST00000409892 PANK3Q9H999 370 aa22.55■■□□□ 1.2
RAB1A-204ENST00000409892 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
RAB1A-204ENST00000409892 APPP05067 770 aa22.54■■□□□ 1.2
RAB1A-204ENST00000409892 CCDC18Q5T9S5 1454 aa22.53■■□□□ 1.2
RAB1A-204ENST00000409892 HMGN5P82970 282 aaKnown RBP22.53■■□□□ 1.2
RAB1A-204ENST00000409892 KIF3AQ9Y496 699 aa22.53■■□□□ 1.2
RAB1A-204ENST00000409892 PLIN1O60240 522 aa22.52■■□□□ 1.2
RAB1A-204ENST00000409892 RALBP1Q15311 655 aa22.52■■□□□ 1.2
RAB1A-204ENST00000409892 TBC1D32Q96NH3 1257 aa22.52■■□□□ 1.2
RAB1A-204ENST00000409892 FAM193AP78312 1265 aa22.52■■□□□ 1.2
RAB1A-204ENST00000409892 AEBP1Q8IUX7 1158 aa22.52■■□□□ 1.2
RAB1A-204ENST00000409892 PTMAP06454 111 aaKnown RBP22.51■■□□□ 1.19
RAB1A-204ENST00000409892 CTTNBP2Q8WZ74 1663 aa22.51■■□□□ 1.19
RAB1A-204ENST00000409892 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.51■■□□□ 1.19
RAB1A-204ENST00000409892 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
RAB1A-204ENST00000409892 MYCNP04198 464 aaPredicted RBP22.5■■□□□ 1.19
RAB1A-204ENST00000409892 UPF2Q9HAU5 1272 aaKnown RBP22.5■■□□□ 1.19
RAB1A-204ENST00000409892 HSP90AB1P08238 724 aaKnown RBP22.5■■□□□ 1.19
RAB1A-204ENST00000409892 FEZ1Q99689 392 aa22.5■■□□□ 1.19
RAB1A-204ENST00000409892 EFCC1Q9HA90 598 aa22.5■■□□□ 1.19
RAB1A-204ENST00000409892 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms