RNA–Protein interactions for RNA: ENST00000409538.5

AGAP1-205, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

TSL 5 BASIC

Gene AGAP1, Length 6,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-205ENST00000409538 SMC4Q9NTJ3 1288 aa24.63■■□□□ 1.53
AGAP1-205ENST00000409538 FOXD4L6Q3SYB3 417 aaPredicted RBP24.62■■□□□ 1.53
AGAP1-205ENST00000409538 FOXD4L3Q6VB84 417 aaPredicted RBP24.62■■□□□ 1.53
AGAP1-205ENST00000409538 TPM3P06753 285 aa24.6■■□□□ 1.53
AGAP1-205ENST00000409538 LTV1Q96GA3 475 aaPredicted RBP24.59■■□□□ 1.53
AGAP1-205ENST00000409538 TCERG1O14776 1098 aaKnown RBP24.58■■□□□ 1.53
AGAP1-205ENST00000409538 IPO9Q96P70 1041 aaKnown RBP24.58■■□□□ 1.52
AGAP1-205ENST00000409538 GTF2E1P29083 439 aaPredicted RBP24.57■■□□□ 1.52
AGAP1-205ENST00000409538 NUTM2DQ5VT03 806 aaPredicted RBP24.57■■□□□ 1.52
AGAP1-205ENST00000409538 PMFBP1Q8TBY8 1022 aa24.57■■□□□ 1.52
AGAP1-205ENST00000409538 SF3A1Q15459 793 aaKnown RBP24.56■■□□□ 1.52
AGAP1-205ENST00000409538 CSPP1Q1MSJ5 1256 aa24.55■■□□□ 1.52
AGAP1-205ENST00000409538 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
AGAP1-205ENST00000409538 PATL2C9JE40 543 aaKnown RBP24.54■■□□□ 1.52
AGAP1-205ENST00000409538 L3MBTL2Q969R5 705 aa24.54■■□□□ 1.52
AGAP1-205ENST00000409538 TPD52L1Q16890 204 aaPredicted RBP24.54■■□□□ 1.52
AGAP1-205ENST00000409538 ANKRD30AQ9BXX3 1397 aa24.54■■□□□ 1.52
AGAP1-205ENST00000409538 HMMRO75330 724 aa24.53■■□□□ 1.52
AGAP1-205ENST00000409538 CARMIL2Q6F5E8 1435 aa24.51■■□□□ 1.51
AGAP1-205ENST00000409538 KIF16BQ96L93 1317 aa24.51■■□□□ 1.51
AGAP1-205ENST00000409538 CCAR2Q8N163 923 aaKnown RBP24.51■■□□□ 1.51
AGAP1-205ENST00000409538 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
AGAP1-205ENST00000409538 NUTM2FA1L443 756 aa24.51■■□□□ 1.51
AGAP1-205ENST00000409538 RAD21O60216 631 aa24.5■■□□□ 1.51
AGAP1-205ENST00000409538 H3BQV1 296 aa24.47■■□□□ 1.51
AGAP1-205ENST00000409538 IFFO2Q5TF58 517 aa24.47■■□□□ 1.51
AGAP1-205ENST00000409538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.47■■□□□ 1.51
AGAP1-205ENST00000409538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.46■■□□□ 1.518e-7■■■□□ 15.1
AGAP1-205ENST00000409538 NGDNQ8NEJ9 315 aaKnown RBP24.46■■□□□ 1.51
AGAP1-205ENST00000409538 RRP7AQ9Y3A4 280 aaKnown RBP24.46■■□□□ 1.51
AGAP1-205ENST00000409538 AMPHP49418 695 aa24.46■■□□□ 1.51
AGAP1-205ENST00000409538 FHOD3Q2V2M9 1422 aa24.45■■□□□ 1.51
AGAP1-205ENST00000409538 HNRNPMP52272 730 aaKnown RBP eCLIP24.45■■□□□ 1.512e-6■■■■□ 22
AGAP1-205ENST00000409538 PLIN1O60240 522 aa24.45■■□□□ 1.5
AGAP1-205ENST00000409538 EIF3AQ14152 1382 aaKnown RBP24.45■■□□□ 1.5
AGAP1-205ENST00000409538 RILPL2Q969X0 211 aa24.44■■□□□ 1.5
AGAP1-205ENST00000409538 WIZO95785 1651 aa24.44■■□□□ 1.5
AGAP1-205ENST00000409538 HSP90AA2PQ14568 343 aaPredicted RBP24.43■■□□□ 1.5
AGAP1-205ENST00000409538 BCL2L13Q9BXK5 485 aa24.42■■□□□ 1.5
AGAP1-205ENST00000409538 MSH5O43196 834 aa24.42■■□□□ 1.5
AGAP1-205ENST00000409538 ST18O60284 1047 aa24.42■■□□□ 1.5
AGAP1-205ENST00000409538 PHF14O94880 888 aa24.41■■□□□ 1.5
AGAP1-205ENST00000409538 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
AGAP1-205ENST00000409538 TSR1Q2NL82 804 aaKnown RBP24.41■■□□□ 1.5
AGAP1-205ENST00000409538 KRI1Q8N9T8 703 aaKnown RBP24.41■■□□□ 1.5
AGAP1-205ENST00000409538 EFCAB2Q5VUJ9 269 aa24.41■■□□□ 1.5
AGAP1-205ENST00000409538 VSIG10Q8N0Z9 540 aa24.41■■□□□ 1.5
AGAP1-205ENST00000409538 HDAC5Q9UQL6 1122 aa24.41■■□□□ 1.5
AGAP1-205ENST00000409538 BCL11BQ9C0K0 894 aaPredicted RBP24.4■■□□□ 1.5
AGAP1-205ENST00000409538 FAM184AQ8NB25 1140 aa24.4■■□□□ 1.5
AGAP1-205ENST00000409538 NLRP13Q86W25 1043 aa24.39■■□□□ 1.5
AGAP1-205ENST00000409538 CHMP4AQ9BY43 222 aa24.39■■□□□ 1.5
AGAP1-205ENST00000409538 USP35Q9P2H5 1018 aa24.39■■□□□ 1.49
AGAP1-205ENST00000409538 SETQ01105 290 aaPredicted RBP24.38■■□□□ 1.49
AGAP1-205ENST00000409538 CENPJQ9HC77 1338 aaPredicted RBP24.38■■□□□ 1.49
AGAP1-205ENST00000409538 TCEAL9Q9UHQ7 104 aa24.38■■□□□ 1.49
AGAP1-205ENST00000409538 KIF3BO15066 747 aa24.38■■□□□ 1.49
AGAP1-205ENST00000409538 AKAP17AQ02040 695 aaKnown RBP24.38■■□□□ 1.49
AGAP1-205ENST00000409538 ELL2O00472 640 aaPredicted RBP24.37■■□□□ 1.49
AGAP1-205ENST00000409538 MCTP1Q6DN14 999 aa24.37■■□□□ 1.49
AGAP1-205ENST00000409538 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
AGAP1-205ENST00000409538 NGEFQ8N5V2 710 aa24.36■■□□□ 1.49
AGAP1-205ENST00000409538 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
AGAP1-205ENST00000409538 KIF3AQ9Y496 699 aa24.36■■□□□ 1.49
AGAP1-205ENST00000409538 TERF2IPQ9NYB0 399 aa24.36■■□□□ 1.49
AGAP1-205ENST00000409538 PCMTD1Q96MG8 357 aaPredicted RBP24.35■■□□□ 1.49
AGAP1-205ENST00000409538 TPM2P07951 284 aa24.35■■□□□ 1.49
AGAP1-205ENST00000409538 GOLGA6L19H0YKK7 550 aa24.34■■□□□ 1.49
AGAP1-205ENST00000409538 ZNF592Q92610 1267 aa24.34■■□□□ 1.49
AGAP1-205ENST00000409538 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
AGAP1-205ENST00000409538 DHX57Q6P158 1386 aaKnown RBP24.33■■□□□ 1.49
AGAP1-205ENST00000409538 PDE3BQ13370 1112 aa24.33■■□□□ 1.49
AGAP1-205ENST00000409538 CTDP1Q9Y5B0 961 aaPredicted RBP24.32■■□□□ 1.48
AGAP1-205ENST00000409538 CNKSR2Q8WXI2 1034 aa24.32■■□□□ 1.48
AGAP1-205ENST00000409538 TRIM34Q9BYJ4 488 aa24.32■■□□□ 1.48
AGAP1-205ENST00000409538 KIF15Q9NS87 1388 aa24.31■■□□□ 1.48
AGAP1-205ENST00000409538 BECN2A8MW95 431 aa24.31■■□□□ 1.48
AGAP1-205ENST00000409538 EID1Q9Y6B2 187 aa24.3■■□□□ 1.48
AGAP1-205ENST00000409538 FBXW7Q969H0 707 aa24.3■■□□□ 1.48
AGAP1-205ENST00000409538 DDX49Q9Y6V7 483 aaKnown RBP24.29■■□□□ 1.48
AGAP1-205ENST00000409538 ANKRD45Q5TZF3 282 aa24.29■■□□□ 1.48
AGAP1-205ENST00000409538 MYBBP1AQ9BQG0 1328 aaKnown RBP24.29■■□□□ 1.48
AGAP1-205ENST00000409538 LMOD3Q0VAK6 560 aa24.29■■□□□ 1.48
AGAP1-205ENST00000409538 TPM1P09493 284 aa24.29■■□□□ 1.48
AGAP1-205ENST00000409538 CCDC18Q5T9S5 1454 aa24.28■■□□□ 1.48
AGAP1-205ENST00000409538 SYNE3Q6ZMZ3 975 aa24.28■■□□□ 1.48
AGAP1-205ENST00000409538 ST20-MTHFSA0A0A6YYL1 179 aa24.27■■□□□ 1.48
AGAP1-205ENST00000409538 EXOC6Q8TAG9 804 aa24.26■■□□□ 1.47
AGAP1-205ENST00000409538 DHX16O60231 1041 aaKnown RBP24.26■■□□□ 1.47
AGAP1-205ENST00000409538 PANK3Q9H999 370 aa24.26■■□□□ 1.47
AGAP1-205ENST00000409538 CCDC70Q6NSX1 233 aa24.25■■□□□ 1.47
AGAP1-205ENST00000409538 EVA1CP58658 441 aa24.25■■□□□ 1.47
AGAP1-205ENST00000409538 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
AGAP1-205ENST00000409538 DDX11L8A8MPP1 907 aa24.24■■□□□ 1.47
AGAP1-205ENST00000409538 PDE4AP27815 886 aa24.24■■□□□ 1.47
AGAP1-205ENST00000409538 TRAK1Q9UPV9 953 aa24.24■■□□□ 1.47
AGAP1-205ENST00000409538 SAMD1Q6SPF0 538 aaPredicted RBP24.24■■□□□ 1.47
AGAP1-205ENST00000409538 NOL10Q9BSC4 688 aaKnown RBP24.24■■□□□ 1.47
AGAP1-205ENST00000409538 C1orf141Q5JVX7 400 aa24.23■■□□□ 1.47
AGAP1-205ENST00000409538 GSE1Q14687 1217 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms