RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 FOXD1Q16676 465 aa7.52□□□□□ -1.21
R3HDM1-202ENST00000409478 VIRMAQ69YN4 1812 aaKnown RBP7.51□□□□□ -1.21
R3HDM1-202ENST00000409478 FANCD2Q9BXW9 1451 aa7.51□□□□□ -1.21
R3HDM1-202ENST00000409478 CDCA7LQ96GN5 454 aa7.51□□□□□ -1.21
R3HDM1-202ENST00000409478 LRRIQ1Q96JM4 1722 aa7.51□□□□□ -1.21
R3HDM1-202ENST00000409478 E9PCH4 1651 aa7.51□□□□□ -1.21
R3HDM1-202ENST00000409478 CUL7Q14999 1698 aa7.51□□□□□ -1.21
R3HDM1-202ENST00000409478 PARD3Q8TEW0 1356 aa7.5□□□□□ -1.21
R3HDM1-202ENST00000409478 ESPNB1AK53 854 aa7.5□□□□□ -1.21
R3HDM1-202ENST00000409478 RALGAPBQ86X10 1494 aa7.5□□□□□ -1.21
R3HDM1-202ENST00000409478 SAMD9Q5K651 1589 aa7.5□□□□□ -1.21
R3HDM1-202ENST00000409478 PLEKHG5O94827 1062 aa7.49□□□□□ -1.21
R3HDM1-202ENST00000409478 EIF3AQ14152 1382 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-202ENST00000409478 SLC4A1APQ9BWU0 796 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-202ENST00000409478 ANTXR1Q9H6X2 564 aa7.49□□□□□ -1.21
R3HDM1-202ENST00000409478 KIF21AQ7Z4S6 1674 aa7.49□□□□□ -1.21
R3HDM1-202ENST00000409478 UHRF1BP1Q6BDS2 1440 aa7.49□□□□□ -1.21
R3HDM1-202ENST00000409478 RGS3P49796 1198 aa7.49□□□□□ -1.21
R3HDM1-202ENST00000409478 MYH16Q9H6N6 1097 aa7.49□□□□□ -1.21
R3HDM1-202ENST00000409478 SLKQ9H2G2 1235 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-202ENST00000409478 USP19O94966 1318 aa7.48□□□□□ -1.21
R3HDM1-202ENST00000409478 C20orf194Q5TEA3 1177 aa7.48□□□□□ -1.21
R3HDM1-202ENST00000409478 TRIM44Q96DX7 344 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-202ENST00000409478 MAPK8IP3Q9UPT6 1336 aa7.48□□□□□ -1.21
R3HDM1-202ENST00000409478 NESP48681 1621 aa7.48□□□□□ -1.21
R3HDM1-202ENST00000409478 UPF2Q9HAU5 1272 aaKnown RBP7.48□□□□□ -1.21
R3HDM1-202ENST00000409478 MAP7D2Q96T17 732 aa7.47□□□□□ -1.21
R3HDM1-202ENST00000409478 MCM4P33991 863 aa7.47□□□□□ -1.21
R3HDM1-202ENST00000409478 PANK2Q9BZ23 570 aa7.47□□□□□ -1.21
R3HDM1-202ENST00000409478 SLC24A1O60721 1099 aa7.47□□□□□ -1.21
R3HDM1-202ENST00000409478 CCDC144AA2RUR9 1427 aa7.46□□□□□ -1.21
R3HDM1-202ENST00000409478 GRPEL1Q9HAV7 217 aa7.46□□□□□ -1.21
R3HDM1-202ENST00000409478 ZMYM3Q14202 1370 aa7.46□□□□□ -1.21
R3HDM1-202ENST00000409478 TERF1P54274 439 aa7.46□□□□□ -1.22
R3HDM1-202ENST00000409478 CARD11Q9BXL7 1154 aa7.46□□□□□ -1.22
R3HDM1-202ENST00000409478 GAPVD1Q14C86 1478 aa7.46□□□□□ -1.22
R3HDM1-202ENST00000409478 LAMC3Q9Y6N6 1575 aa7.46□□□□□ -1.22
R3HDM1-202ENST00000409478 ARXQ96QS3 562 aa7.46□□□□□ -1.22
R3HDM1-202ENST00000409478 DAPK1P53355 1430 aa7.46□□□□□ -1.22
R3HDM1-202ENST00000409478 MAGI3Q5TCQ9 1506 aa7.46□□□□□ -1.22
R3HDM1-202ENST00000409478 DDX11L8A8MPP1 907 aa7.45□□□□□ -1.22
R3HDM1-202ENST00000409478 ARHGEF12Q9NZN5 1544 aa7.45□□□□□ -1.22
R3HDM1-202ENST00000409478 KIAA1107Q9UPP5 1409 aa7.45□□□□□ -1.22
R3HDM1-202ENST00000409478 ZNF326Q5BKZ1 582 aaKnown RBP7.45□□□□□ -1.22
R3HDM1-202ENST00000409478 PRDM4Q9UKN5 801 aa7.45□□□□□ -1.22
R3HDM1-202ENST00000409478 NLRP1Q9C000 1473 aa7.45□□□□□ -1.22
R3HDM1-202ENST00000409478 TRAK2O60296 914 aa7.45□□□□□ -1.22
R3HDM1-202ENST00000409478 RBM10P98175 930 aaKnown RBP7.44□□□□□ -1.22
R3HDM1-202ENST00000409478 DNMT1P26358 1616 aaKnown RBP7.44□□□□□ -1.22
R3HDM1-202ENST00000409478 PZPP20742 1482 aa7.44□□□□□ -1.22
R3HDM1-202ENST00000409478 ABCA10Q8WWZ4 1543 aa7.44□□□□□ -1.22
R3HDM1-202ENST00000409478 CHMP5Q9NZZ3 219 aa7.44□□□□□ -1.22
R3HDM1-202ENST00000409478 GZF1Q9H116 711 aaPredicted RBP7.44□□□□□ -1.22
R3HDM1-202ENST00000409478 DUSP27Q5VZP5 1158 aa7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 KIAA1211Q6ZU35 1233 aa7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 TBC1D2Q9BYX2 928 aa7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 ERBB4Q15303 1308 aa7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 ST20-MTHFSA0A0A6YYL1 179 aa7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 PTMSP20962 102 aa7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 MTERF4Q7Z6M4 381 aaKnown RBP7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 TBC1D32Q96NH3 1257 aa7.43□□□□□ -1.22
R3HDM1-202ENST00000409478 ARID3CA6NKF2 412 aa7.42□□□□□ -1.22
R3HDM1-202ENST00000409478 AAMPQ13685 434 aa7.42□□□□□ -1.22
R3HDM1-202ENST00000409478 NINLQ9Y2I6 1382 aa7.42□□□□□ -1.22
R3HDM1-202ENST00000409478 ZNF608Q9ULD9 1512 aaPredicted RBP7.42□□□□□ -1.22
R3HDM1-202ENST00000409478 ABCC5O15440 1437 aa7.42□□□□□ -1.22
R3HDM1-202ENST00000409478 GOLGA2Q08379 1002 aa7.42□□□□□ -1.22
R3HDM1-202ENST00000409478 CLASP1Q7Z460 1538 aa7.42□□□□□ -1.22
R3HDM1-202ENST00000409478 CGNL1Q0VF96 1302 aa7.41□□□□□ -1.22
R3HDM1-202ENST00000409478 SMAP1Q8IYB5 467 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-202ENST00000409478 SEC24BO95487 1268 aa7.41□□□□□ -1.22
R3HDM1-202ENST00000409478 CCDC173Q0VFZ6 552 aa7.41□□□□□ -1.22
R3HDM1-202ENST00000409478 PER1O15534 1290 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-202ENST00000409478 OFD1O75665 1012 aa7.41□□□□□ -1.22
R3HDM1-202ENST00000409478 ANKRD30AQ9BXX3 1397 aa7.4□□□□□ -1.22
R3HDM1-202ENST00000409478 SKOR2Q2VWA4 1001 aaPredicted RBP7.4□□□□□ -1.22
R3HDM1-202ENST00000409478 ZNF521Q96K83 1311 aa7.4□□□□□ -1.23
R3HDM1-202ENST00000409478 EPRSP07814 1512 aaKnown RBP7.4□□□□□ -1.23
R3HDM1-202ENST00000409478 SCAPERQ9BY12 1400 aa7.4□□□□□ -1.23
R3HDM1-202ENST00000409478 FGD1P98174 961 aa7.4□□□□□ -1.23
R3HDM1-202ENST00000409478 ZSCAN30Q86W11 494 aa7.4□□□□□ -1.23
R3HDM1-202ENST00000409478 ANP32BQ92688 251 aaKnown RBP7.4□□□□□ -1.23
R3HDM1-202ENST00000409478 MSNP26038 577 aaKnown RBP7.39□□□□□ -1.23
R3HDM1-202ENST00000409478 NKTRP30414 1462 aaKnown RBP7.39□□□□□ -1.23
R3HDM1-202ENST00000409478 A0A0U1RQG5 324 aaPredicted RBP7.39□□□□□ -1.23
R3HDM1-202ENST00000409478 IGHDP01880 384 aa7.39□□□□□ -1.23
R3HDM1-202ENST00000409478 PDE3AQ14432 1141 aa7.39□□□□□ -1.23
R3HDM1-202ENST00000409478 MRC2Q9UBG0 1479 aa7.39□□□□□ -1.23
R3HDM1-202ENST00000409478 SLFN5Q08AF3 891 aa7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 PLEKHH1Q9ULM0 1364 aa7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 NCLP19338 710 aaKnown RBP7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 WDR43Q15061 677 aaKnown RBP eCLIP7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 CLUAP1Q96AJ1 413 aa7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 PPP1R9BQ96SB3 815 aa7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 PMFBP1Q8TBY8 1022 aa7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 DNMBPQ6XZF7 1577 aa7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 ADGBQ8N7X0 1667 aa7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 PKD2Q13563 968 aa7.38□□□□□ -1.23
R3HDM1-202ENST00000409478 ADAMTS8Q9UP79 889 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms