RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CANXP27824 592 aaKnown RBP17.78■□□□□ 0.44
COL6A2-204ENST00000409416 IFT140Q96RY7 1462 aa17.78■□□□□ 0.44
COL6A2-204ENST00000409416 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
COL6A2-204ENST00000409416 PNISRQ8TF01 805 aaKnown RBP17.78■□□□□ 0.44
COL6A2-204ENST00000409416 KNSTRNQ9Y448 316 aa17.78■□□□□ 0.44
COL6A2-204ENST00000409416 DHX29Q7Z478 1369 aaKnown RBP17.77■□□□□ 0.44
COL6A2-204ENST00000409416 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.43
COL6A2-204ENST00000409416 NOP58Q9Y2X3 529 aaKnown RBP17.76■□□□□ 0.43
COL6A2-204ENST00000409416 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
COL6A2-204ENST00000409416 PAK3O75914 559 aaPredicted RBP17.75■□□□□ 0.43
COL6A2-204ENST00000409416 RGS3P49796 1198 aa17.75■□□□□ 0.43
COL6A2-204ENST00000409416 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
COL6A2-204ENST00000409416 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
COL6A2-204ENST00000409416 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
COL6A2-204ENST00000409416 KIF14Q15058 1648 aa17.74■□□□□ 0.43
COL6A2-204ENST00000409416 C9orf84Q5VXU9 1444 aa17.73■□□□□ 0.43
COL6A2-204ENST00000409416 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
COL6A2-204ENST00000409416 SMG6Q86US8 1419 aaKnown RBP17.72■□□□□ 0.43
COL6A2-204ENST00000409416 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
COL6A2-204ENST00000409416 SPAG9O60271 1321 aaKnown RBP17.71■□□□□ 0.43
COL6A2-204ENST00000409416 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.43
COL6A2-204ENST00000409416 EFCAB2Q5VUJ9 269 aa17.71■□□□□ 0.43
COL6A2-204ENST00000409416 ZBTB47Q9UFB7 747 aaPredicted RBP17.7■□□□□ 0.42
COL6A2-204ENST00000409416 RCAN3Q9UKA8 241 aa17.7■□□□□ 0.42
COL6A2-204ENST00000409416 FRAT1Q92837 279 aaPredicted RBP17.69■□□□□ 0.42
COL6A2-204ENST00000409416 CCDC144AA2RUR9 1427 aa17.69■□□□□ 0.42
COL6A2-204ENST00000409416 TMF1P82094 1093 aa17.68■□□□□ 0.42
COL6A2-204ENST00000409416 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
COL6A2-204ENST00000409416 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
COL6A2-204ENST00000409416 SOX12O15370 315 aa17.67■□□□□ 0.42
COL6A2-204ENST00000409416 RALBP1Q15311 655 aa17.67■□□□□ 0.42
COL6A2-204ENST00000409416 ARXQ96QS3 562 aa17.67■□□□□ 0.42
COL6A2-204ENST00000409416 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
COL6A2-204ENST00000409416 CFAP70Q5T0N1 1121 aa17.67■□□□□ 0.42
COL6A2-204ENST00000409416 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
COL6A2-204ENST00000409416 KTN1Q86UP2 1357 aaKnown RBP17.67■□□□□ 0.42
COL6A2-204ENST00000409416 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
COL6A2-204ENST00000409416 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
COL6A2-204ENST00000409416 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
COL6A2-204ENST00000409416 NLRP13Q86W25 1043 aa17.65■□□□□ 0.42
COL6A2-204ENST00000409416 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
COL6A2-204ENST00000409416 NUTM2FA1L443 756 aa17.64■□□□□ 0.41
COL6A2-204ENST00000409416 SLC4A3P48751 1232 aa17.64■□□□□ 0.41
COL6A2-204ENST00000409416 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
COL6A2-204ENST00000409416 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
COL6A2-204ENST00000409416 CYB5RLQ6IPT4 315 aa17.62■□□□□ 0.41
COL6A2-204ENST00000409416 ARID4BQ4LE39 1312 aaPredicted RBP17.61■□□□□ 0.41
COL6A2-204ENST00000409416 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
COL6A2-204ENST00000409416 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
COL6A2-204ENST00000409416 ARHGAP5Q13017 1502 aa17.6■□□□□ 0.41
COL6A2-204ENST00000409416 SYNJ2O15056 1496 aa17.6■□□□□ 0.41
COL6A2-204ENST00000409416 ATP10BO94823 1461 aa17.6■□□□□ 0.41
COL6A2-204ENST00000409416 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
COL6A2-204ENST00000409416 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.6■□□□□ 0.41
COL6A2-204ENST00000409416 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
COL6A2-204ENST00000409416 ITSN2Q9NZM3 1697 aa17.59■□□□□ 0.41
COL6A2-204ENST00000409416 U2SURPO15042 1029 aaKnown RBP17.59■□□□□ 0.41
COL6A2-204ENST00000409416 BRD4O60885 1362 aaPredicted RBP17.58■□□□□ 0.41
COL6A2-204ENST00000409416 MBD5Q9P267 1494 aa17.58■□□□□ 0.4
COL6A2-204ENST00000409416 RAPGEF3O95398 923 aa17.58■□□□□ 0.4
COL6A2-204ENST00000409416 RALGAPBQ86X10 1494 aa17.58■□□□□ 0.4
COL6A2-204ENST00000409416 APAF1O14727 1248 aa17.57■□□□□ 0.4
COL6A2-204ENST00000409416 KDM5CP41229 1560 aa17.56■□□□□ 0.4
COL6A2-204ENST00000409416 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
COL6A2-204ENST00000409416 ADGRL2O95490 1459 aa17.55■□□□□ 0.4
COL6A2-204ENST00000409416 EIF5BO60841 1220 aaKnown RBP17.54■□□□□ 0.4
COL6A2-204ENST00000409416 PLEKHH2Q8IVE3 1493 aa17.54■□□□□ 0.4
COL6A2-204ENST00000409416 C20orf194Q5TEA3 1177 aa17.54■□□□□ 0.4
COL6A2-204ENST00000409416 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
COL6A2-204ENST00000409416 SRPK2P78362 688 aaKnown RBP17.53■□□□□ 0.4
COL6A2-204ENST00000409416 DISP3Q9P2K9 1392 aa17.52■□□□□ 0.4
COL6A2-204ENST00000409416 SCAPERQ9BY12 1400 aa17.52■□□□□ 0.4
COL6A2-204ENST00000409416 PDE4AP27815 886 aa17.52■□□□□ 0.39
COL6A2-204ENST00000409416 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
COL6A2-204ENST00000409416 WASHC2CQ9Y4E1 1318 aa17.5■□□□□ 0.39
COL6A2-204ENST00000409416 UHRF1BP1Q6BDS2 1440 aa17.5■□□□□ 0.39
COL6A2-204ENST00000409416 TCERG1O14776 1098 aaKnown RBP17.5■□□□□ 0.39
COL6A2-204ENST00000409416 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
COL6A2-204ENST00000409416 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
COL6A2-204ENST00000409416 SPRYD3Q8NCJ5 442 aa17.49■□□□□ 0.39
COL6A2-204ENST00000409416 FBLN1P23142 703 aa17.48■□□□□ 0.39
COL6A2-204ENST00000409416 LRPPRCP42704 1394 aaKnown RBP17.47■□□□□ 0.39
COL6A2-204ENST00000409416 CCDC141Q6ZP82 1450 aa17.47■□□□□ 0.39
COL6A2-204ENST00000409416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL6A2-204ENST00000409416 POGKQ9P215 609 aa17.47■□□□□ 0.39
COL6A2-204ENST00000409416 FAM135AQ9P2D6 1515 aa17.46■□□□□ 0.39
COL6A2-204ENST00000409416 MINK1Q8N4C8 1332 aaPredicted RBP17.46■□□□□ 0.39
COL6A2-204ENST00000409416 ABCC10Q5T3U5 1492 aa17.46■□□□□ 0.39
COL6A2-204ENST00000409416 PER1O15534 1290 aaPredicted RBP17.46■□□□□ 0.39
COL6A2-204ENST00000409416 PDE3BQ13370 1112 aa17.46■□□□□ 0.39
COL6A2-204ENST00000409416 PRAG1Q86YV5 1406 aa17.46■□□□□ 0.39
COL6A2-204ENST00000409416 NEFMP07197 916 aa17.46■□□□□ 0.38
COL6A2-204ENST00000409416 CDC42BPAQ5VT25 1732 aa17.45■□□□□ 0.38
COL6A2-204ENST00000409416 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
COL6A2-204ENST00000409416 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL6A2-204ENST00000409416 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
COL6A2-204ENST00000409416 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
COL6A2-204ENST00000409416 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
COL6A2-204ENST00000409416 ZBTB7CA1YPR0 619 aa17.44■□□□□ 0.38
COL6A2-204ENST00000409416 TESK2Q96S53 571 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms