RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 RUFY1Q96T51 708 aa14.94□□□□□ -0.02
SHANK2-203ENST00000409161 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
SHANK2-203ENST00000409161 CENPJQ9HC77 1338 aaPredicted RBP14.93□□□□□ -0.02
SHANK2-203ENST00000409161 KAT6BQ8WYB5 2073 aa14.93□□□□□ -0.02
SHANK2-203ENST00000409161 CCAR2Q8N163 923 aaKnown RBP14.93□□□□□ -0.02
SHANK2-203ENST00000409161 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
SHANK2-203ENST00000409161 DDX49Q9Y6V7 483 aaKnown RBP14.92□□□□□ -0.02
SHANK2-203ENST00000409161 CCDC66A2RUB6 948 aa14.91□□□□□ -0.02
SHANK2-203ENST00000409161 HSP90B2PQ58FF3 399 aa14.91□□□□□ -0.02
SHANK2-203ENST00000409161 APBB1O00213 710 aa14.91□□□□□ -0.02
SHANK2-203ENST00000409161 SENP3-EIF4A1A0A087X0R7 540 aa14.9□□□□□ -0.02
SHANK2-203ENST00000409161 PES1O00541 588 aaKnown RBP14.9□□□□□ -0.02
SHANK2-203ENST00000409161 CCDC191Q8NCU4 936 aa14.9□□□□□ -0.02
SHANK2-203ENST00000409161 CREBRFQ8IUR6 639 aa14.9□□□□□ -0.02
SHANK2-203ENST00000409161 REC8O95072 547 aa14.9□□□□□ -0.02
SHANK2-203ENST00000409161 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
SHANK2-203ENST00000409161 KIF15Q9NS87 1388 aa14.89□□□□□ -0.03
SHANK2-203ENST00000409161 TAF7LQ5H9L4 462 aa14.89□□□□□ -0.03
SHANK2-203ENST00000409161 MYO6Q9UM54 1294 aa14.89□□□□□ -0.03
SHANK2-203ENST00000409161 U2AF1L5P0DN76 240 aaPredicted RBP14.89□□□□□ -0.03
SHANK2-203ENST00000409161 U2AF1Q01081 240 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHANK2-203ENST00000409161 VPS8Q8N3P4 1428 aa14.89□□□□□ -0.03
SHANK2-203ENST00000409161 FAM184AQ8NB25 1140 aa14.89□□□□□ -0.03
SHANK2-203ENST00000409161 ROCK1Q13464 1354 aa14.88□□□□□ -0.03
SHANK2-203ENST00000409161 CCDC47Q96A33 483 aaKnown RBP14.88□□□□□ -0.03
SHANK2-203ENST00000409161 DIAPH3Q9NSV4 1193 aa14.88□□□□□ -0.03
SHANK2-203ENST00000409161 AKAP17AQ02040 695 aaKnown RBP14.88□□□□□ -0.03
SHANK2-203ENST00000409161 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
SHANK2-203ENST00000409161 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
SHANK2-203ENST00000409161 NLRP13Q86W25 1043 aa14.87□□□□□ -0.03
SHANK2-203ENST00000409161 TSHZ2Q9NRE2 1034 aa14.87□□□□□ -0.03
SHANK2-203ENST00000409161 CPLX2Q6PUV4 134 aaKnown RBP14.87□□□□□ -0.03
SHANK2-203ENST00000409161 RDXP35241 583 aaKnown RBP14.87□□□□□ -0.03
SHANK2-203ENST00000409161 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
SHANK2-203ENST00000409161 MARCH6O60337 910 aa14.86□□□□□ -0.03
SHANK2-203ENST00000409161 ERCC4Q92889 916 aaPredicted RBP14.86□□□□□ -0.03
SHANK2-203ENST00000409161 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
SHANK2-203ENST00000409161 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
SHANK2-203ENST00000409161 NAT10Q9H0A0 1025 aaKnown RBP14.85□□□□□ -0.03
SHANK2-203ENST00000409161 HOMER1Q86YM7 354 aa14.85□□□□□ -0.03
SHANK2-203ENST00000409161 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
SHANK2-203ENST00000409161 HSPA5P11021 654 aaKnown RBP14.84□□□□□ -0.03
SHANK2-203ENST00000409161 DHX8Q14562 1220 aaKnown RBP14.84□□□□□ -0.03
SHANK2-203ENST00000409161 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
SHANK2-203ENST00000409161 CCP110O43303 1012 aa14.83□□□□□ -0.04
SHANK2-203ENST00000409161 CGNL1Q0VF96 1302 aa14.83□□□□□ -0.04
SHANK2-203ENST00000409161 NGEFQ8N5V2 710 aa14.83□□□□□ -0.04
SHANK2-203ENST00000409161 CHMP3Q9Y3E7 222 aa14.83□□□□□ -0.04
SHANK2-203ENST00000409161 AAMPQ13685 434 aa14.83□□□□□ -0.04
SHANK2-203ENST00000409161 SYNE3Q6ZMZ3 975 aa14.82□□□□□ -0.04
SHANK2-203ENST00000409161 TRIM29Q14134 588 aa14.82□□□□□ -0.04
SHANK2-203ENST00000409161 CCDC173Q0VFZ6 552 aa14.82□□□□□ -0.04
SHANK2-203ENST00000409161 ZNF592Q92610 1267 aa14.82□□□□□ -0.04
SHANK2-203ENST00000409161 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
SHANK2-203ENST00000409161 PATL2C9JE40 543 aaKnown RBP14.81□□□□□ -0.04
SHANK2-203ENST00000409161 APPP05067 770 aa14.81□□□□□ -0.04
SHANK2-203ENST00000409161 NUCB2P80303 420 aa14.81□□□□□ -0.04
SHANK2-203ENST00000409161 TCEAL9Q9UHQ7 104 aa14.81□□□□□ -0.04
SHANK2-203ENST00000409161 FAM13BQ9NYF5 915 aa14.81□□□□□ -0.04
SHANK2-203ENST00000409161 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
SHANK2-203ENST00000409161 ZKSCAN1P17029 563 aaPredicted RBP14.8□□□□□ -0.04
SHANK2-203ENST00000409161 PDE4CQ08493 712 aa14.8□□□□□ -0.04
SHANK2-203ENST00000409161 CCDC39Q9UFE4 941 aa14.8□□□□□ -0.04
SHANK2-203ENST00000409161 VPS53Q5VIR6 699 aa14.79□□□□□ -0.04
SHANK2-203ENST00000409161 MNS1Q8NEH6 495 aa14.79□□□□□ -0.04
SHANK2-203ENST00000409161 AMOTL1Q8IY63 956 aa14.79□□□□□ -0.04
SHANK2-203ENST00000409161 RNF20Q5VTR2 975 aa14.79□□□□□ -0.04
SHANK2-203ENST00000409161 H0YHG0 523 aa14.79□□□□□ -0.04
SHANK2-203ENST00000409161 HMGN5P82970 282 aaKnown RBP14.79□□□□□ -0.04
SHANK2-203ENST00000409161 ANKRD30AQ9BXX3 1397 aa14.79□□□□□ -0.04
SHANK2-203ENST00000409161 LETM1O95202 739 aaPredicted RBP14.78□□□□□ -0.04
SHANK2-203ENST00000409161 ZRSR2Q15696 482 aaKnown RBP14.78□□□□□ -0.04
SHANK2-203ENST00000409161 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
SHANK2-203ENST00000409161 TAF3Q5VWG9 929 aa14.77□□□□□ -0.04
SHANK2-203ENST00000409161 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
SHANK2-203ENST00000409161 ANO8Q9HCE9 1232 aaPredicted RBP14.77□□□□□ -0.04
SHANK2-203ENST00000409161 SASS6Q6UVJ0 657 aa14.77□□□□□ -0.05
SHANK2-203ENST00000409161 PCMTD1Q96MG8 357 aaPredicted RBP14.77□□□□□ -0.05
SHANK2-203ENST00000409161 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.77□□□□□ -0.05
SHANK2-203ENST00000409161 CCDC18Q5T9S5 1454 aa14.77□□□□□ -0.05
SHANK2-203ENST00000409161 KIF7Q2M1P5 1343 aa14.76□□□□□ -0.05
SHANK2-203ENST00000409161 PDE4AP27815 886 aa14.76□□□□□ -0.05
SHANK2-203ENST00000409161 CHMP5Q9NZZ3 219 aa14.76□□□□□ -0.05
SHANK2-203ENST00000409161 E9PSI1 815 aa14.76□□□□□ -0.05
SHANK2-203ENST00000409161 CAGE1Q8TC20 777 aa14.75□□□□□ -0.05
SHANK2-203ENST00000409161 G3V3G9 751 aa14.75□□□□□ -0.05
SHANK2-203ENST00000409161 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
SHANK2-203ENST00000409161 MCTP1Q6DN14 999 aa14.75□□□□□ -0.05
SHANK2-203ENST00000409161 IFT57Q9NWB7 429 aa14.74□□□□□ -0.05
SHANK2-203ENST00000409161 RAB3GAP2Q9H2M9 1393 aa14.74□□□□□ -0.05
SHANK2-203ENST00000409161 LEKR1Q6ZMV7 388 aa14.74□□□□□ -0.05
SHANK2-203ENST00000409161 CARMIL2Q6F5E8 1435 aa14.74□□□□□ -0.05
SHANK2-203ENST00000409161 NOL8Q76FK4 1167 aaKnown RBP14.74□□□□□ -0.05
SHANK2-203ENST00000409161 GOLGA6L7A0A1B0GV03 622 aa14.73□□□□□ -0.05
SHANK2-203ENST00000409161 TOMM22Q9NS69 142 aa14.73□□□□□ -0.05
SHANK2-203ENST00000409161 WWC1Q8IX03 1113 aa14.73□□□□□ -0.05
SHANK2-203ENST00000409161 FOXD4L1Q9NU39 408 aa14.73□□□□□ -0.05
SHANK2-203ENST00000409161 SLC4A10Q6U841 1118 aa14.72□□□□□ -0.05
SHANK2-203ENST00000409161 MRE11P49959 708 aa14.72□□□□□ -0.05
SHANK2-203ENST00000409161 ODF2Q5BJF6 829 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms