RNA–Protein interactions for RNA: ENST00000408689.1

MIR548H4-201, Transcript of microRNA 548h-4, humanhuman

BASIC

Gene MIR548H4, Length 111 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548H4-201ENST00000408689 NXF1Q9UBU9 619 aaKnown RBP1.46□□□□□ -2.18
MIR548H4-201ENST00000408689 AXIN1O15169 862 aa1.45□□□□□ -2.18
MIR548H4-201ENST00000408689 PSEN2P49810 448 aa1.45□□□□□ -2.18
MIR548H4-201ENST00000408689 PDCD7Q8N8D1 485 aaKnown RBP1.45□□□□□ -2.18
MIR548H4-201ENST00000408689 PCDHB13Q9Y5F0 798 aa1.45□□□□□ -2.18
MIR548H4-201ENST00000408689 JAG2Q9Y219 1238 aa1.44□□□□□ -2.18
MIR548H4-201ENST00000408689 KRTAP9-7A8MTY7 169 aa1.43□□□□□ -2.18
MIR548H4-201ENST00000408689 TNFRSF10AO00220 468 aa1.43□□□□□ -2.18
MIR548H4-201ENST00000408689 NPM3O75607 178 aaKnown RBP1.43□□□□□ -2.18
MIR548H4-201ENST00000408689 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
MIR548H4-201ENST00000408689 PPP1R18Q6NYC8 613 aa1.43□□□□□ -2.18
MIR548H4-201ENST00000408689 ITGB2P05107 769 aa1.42□□□□□ -2.18
MIR548H4-201ENST00000408689 MARSP56192 900 aaKnown RBP1.42□□□□□ -2.18
MIR548H4-201ENST00000408689 ARTNQ5T4W7 220 aa1.41□□□□□ -2.18
MIR548H4-201ENST00000408689 FMNL2Q96PY5 1086 aa1.4□□□□□ -2.19
MIR548H4-201ENST00000408689 CSRNP1Q96S65 589 aa1.4□□□□□ -2.19
MIR548H4-201ENST00000408689 KRTAP9-3Q9BYQ3 159 aa1.4□□□□□ -2.19
MIR548H4-201ENST00000408689 DCAF5Q96JK2 942 aa1.39□□□□□ -2.19
MIR548H4-201ENST00000408689 TRIM47Q96LD4 638 aa1.39□□□□□ -2.19
MIR548H4-201ENST00000408689 H3BM21 787 aa1.38□□□□□ -2.19
MIR548H4-201ENST00000408689 MNX1P50219 401 aaPredicted RBP1.38□□□□□ -2.19
MIR548H4-201ENST00000408689 CRIPAKQ8N1N5 446 aa1.38□□□□□ -2.19
MIR548H4-201ENST00000408689 SEMA6BQ9H3T3 888 aa1.38□□□□□ -2.19
MIR548H4-201ENST00000408689 SENP2Q9HC62 589 aa1.38□□□□□ -2.19
MIR548H4-201ENST00000408689 LHX6Q9UPM6 363 aa1.38□□□□□ -2.19
MIR548H4-201ENST00000408689 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
MIR548H4-201ENST00000408689 NUDT7P0C024 238 aa1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 ITGB7P26010 798 aa1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 BUD31P41223 144 aaPredicted RBP1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 PRR20EP86478 221 aa1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 PRR20CP86479 221 aa1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 PRR20DP86480 221 aa1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 PRR20BP86481 221 aa1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 PRR20AP86496 221 aa1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 SCARF2Q96GP6 870 aaPredicted RBP1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 EIF4ENIF1Q9NRA8 985 aaKnown RBP1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 RNF114Q9Y508 228 aa1.37□□□□□ -2.19
MIR548H4-201ENST00000408689 PRRG2O14669 202 aa1.36□□□□□ -2.19
MIR548H4-201ENST00000408689 IFNL1Q8IU54 200 aa1.36□□□□□ -2.19
MIR548H4-201ENST00000408689 SVOPQ8N4V2 548 aa1.36□□□□□ -2.19
MIR548H4-201ENST00000408689 MRPL50Q8N5N7 158 aaKnown RBP1.36□□□□□ -2.19
MIR548H4-201ENST00000408689 NCANO14594 1321 aa1.36□□□□□ -2.19
MIR548H4-201ENST00000408689 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
MIR548H4-201ENST00000408689 NPAS3Q8IXF0 933 aa1.35□□□□□ -2.19
MIR548H4-201ENST00000408689 ATP13A2Q9NQ11 1180 aa1.35□□□□□ -2.19
MIR548H4-201ENST00000408689 MYCNP04198 464 aaPredicted RBP1.34□□□□□ -2.19
MIR548H4-201ENST00000408689 FOXD4L6Q3SYB3 417 aaPredicted RBP1.34□□□□□ -2.19
MIR548H4-201ENST00000408689 FBLN7Q53RD9 439 aa1.34□□□□□ -2.19
MIR548H4-201ENST00000408689 FOXD4L3Q6VB84 417 aaPredicted RBP1.34□□□□□ -2.19
MIR548H4-201ENST00000408689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP1.34□□□□□ -2.19
MIR548H4-201ENST00000408689 VPS9D1Q9Y2B5 631 aa1.34□□□□□ -2.19
MIR548H4-201ENST00000408689 B8ZZF3 427 aa1.33□□□□□ -2.2
MIR548H4-201ENST00000408689 ZNF865P0CJ78 1059 aaPredicted RBP1.33□□□□□ -2.2
MIR548H4-201ENST00000408689 KRTAP10-7P60409 375 aaPredicted RBP1.33□□□□□ -2.2
MIR548H4-201ENST00000408689 BOLA1Q9Y3E2 137 aa1.33□□□□□ -2.2
MIR548H4-201ENST00000408689 IGHA2P01877 340 aa1.32□□□□□ -2.2
MIR548H4-201ENST00000408689 SLC19A1P41440 591 aa1.32□□□□□ -2.2
MIR548H4-201ENST00000408689 BCAMP50895 628 aa1.32□□□□□ -2.2
MIR548H4-201ENST00000408689 GOLGA2Q08379 1002 aa1.32□□□□□ -2.2
MIR548H4-201ENST00000408689 CTC1Q2NKJ3 1217 aa1.32□□□□□ -2.2
MIR548H4-201ENST00000408689 KIFC2Q96AC6 838 aa1.32□□□□□ -2.2
MIR548H4-201ENST00000408689 SGIP1Q9BQI5 828 aa1.32□□□□□ -2.2
MIR548H4-201ENST00000408689 COL17A1Q9UMD9 1497 aaPredicted RBP1.31□□□□□ -2.2
MIR548H4-201ENST00000408689 MKRN3Q13064 507 aaKnown RBP1.31□□□□□ -2.2
MIR548H4-201ENST00000408689 ZNF697Q5TEC3 545 aa1.3□□□□□ -2.2
MIR548H4-201ENST00000408689 NYAP1Q6ZVC0 841 aa1.3□□□□□ -2.2
MIR548H4-201ENST00000408689 KCNH8Q96L42 1107 aa1.3□□□□□ -2.2
MIR548H4-201ENST00000408689 KCNK17Q96T54 332 aa1.3□□□□□ -2.2
MIR548H4-201ENST00000408689 OVOL3O00110 214 aa1.29□□□□□ -2.2
MIR548H4-201ENST00000408689 GSC2O15499 205 aa1.29□□□□□ -2.2
MIR548H4-201ENST00000408689 ZNF598Q86UK7 904 aaKnown RBP1.29□□□□□ -2.2
MIR548H4-201ENST00000408689 ANKK1Q8NFD2 765 aa1.29□□□□□ -2.2
MIR548H4-201ENST00000408689 SUV39H1O43463 412 aa1.28□□□□□ -2.2
MIR548H4-201ENST00000408689 GDF9O60383 454 aa1.28□□□□□ -2.2
MIR548H4-201ENST00000408689 AVPP01185 164 aa1.28□□□□□ -2.2
MIR548H4-201ENST00000408689 ZNF385CQ66K41 422 aaPredicted RBP1.28□□□□□ -2.2
MIR548H4-201ENST00000408689 EMID1Q96A84 441 aaPredicted RBP1.28□□□□□ -2.2
MIR548H4-201ENST00000408689 MKRN4PQ13434 485 aaPredicted RBP1.27□□□□□ -2.21
MIR548H4-201ENST00000408689 SPRYD7Q5W111 196 aa1.27□□□□□ -2.21
MIR548H4-201ENST00000408689 STAG3Q9UJ98 1225 aa1.27□□□□□ -2.21
MIR548H4-201ENST00000408689 GGCXP38435 758 aa1.26□□□□□ -2.21
MIR548H4-201ENST00000408689 FOXC1Q12948 553 aa1.26□□□□□ -2.21
MIR548H4-201ENST00000408689 PHF20L1A8MW92 1017 aa1.25□□□□□ -2.21
MIR548H4-201ENST00000408689 BHMG1C9JSJ3 638 aaPredicted RBP1.25□□□□□ -2.21
MIR548H4-201ENST00000408689 LILRA6Q6PI73 481 aa1.25□□□□□ -2.21
MIR548H4-201ENST00000408689 TTC13Q8NBP0 860 aa1.25□□□□□ -2.21
MIR548H4-201ENST00000408689 NAF1Q96HR8 494 aaKnown RBP1.25□□□□□ -2.21
MIR548H4-201ENST00000408689 CNTNAP3BQ96NU0 1288 aa1.25□□□□□ -2.21
MIR548H4-201ENST00000408689 CNTNAP3Q9BZ76 1288 aa1.25□□□□□ -2.21
MIR548H4-201ENST00000408689 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
MIR548H4-201ENST00000408689 SMCPP49901 116 aaPredicted RBP1.24□□□□□ -2.21
MIR548H4-201ENST00000408689 WHAMMQ8TF30 809 aa1.24□□□□□ -2.21
MIR548H4-201ENST00000408689 CNTNAP5Q8WYK1 1306 aa1.23□□□□□ -2.21
MIR548H4-201ENST00000408689 LRP8Q14114 963 aa1.23□□□□□ -2.21
MIR548H4-201ENST00000408689 SPOCD1Q6ZMY3 1216 aa1.23□□□□□ -2.21
MIR548H4-201ENST00000408689 NBPF3Q9H094 633 aa1.23□□□□□ -2.21
MIR548H4-201ENST00000408689 PSDA5PKW4 1024 aaPredicted RBP1.22□□□□□ -2.21
MIR548H4-201ENST00000408689 HYAL3O43820 417 aaPredicted RBP1.22□□□□□ -2.21
MIR548H4-201ENST00000408689 VSIG8P0DPA2 414 aa1.22□□□□□ -2.21
MIR548H4-201ENST00000408689 IRAK1P51617 712 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms